BY JAYANT SINGH PARIHAR¶

Project - Human Metagenomics¶

Import Libraries¶

In [1]:
import pandas as pd
import numpy as np
import matplotlib.pyplot as plt
import seaborn as sns

Dataframe vs Series¶

In [2]:
data = pd.read_csv("abundance.csv")

/var/folders/b4/_dfkx7ls7yx63xxh8hx0s11r0000gn/T/ipykernel_9294/2423369456.py:1: DtypeWarning: Columns (2,5,9,20,26,42,47,51,52,59,61,68,76,77,78,79) have mixed types. Specify dtype option on import or set low_memory=False.
  data = pd.read_csv("abundance.csv")
In [3]:
data
Out[3]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 Candela_Africa H10 h10 stool n 40 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 Candela_Africa H11 h11 stool n 29 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 Candela_Africa H12 h12 stool n 8 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 Candela_Africa H13 h13 stool n 34 male tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 Candela_Africa H14 h14 stool n 30 male tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3605 Zeller_fecal_colorectal_cancer CCIS95409808ST-4-0 fr-152 stool n 63 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3606 Zeller_fecal_colorectal_cancer CCIS96387239ST-4-0 fr-626 stool small_adenoma 66 male france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3607 Zeller_fecal_colorectal_cancer CCIS98482370ST-3-0 fr-052 stool n 53 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 Zeller_fecal_colorectal_cancer CCIS98512455ST-4-0 fr-459 stool cancer 63 male france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 Zeller_fecal_colorectal_cancer CCIS98832363ST-4-0 fr-552 stool cancer 55 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3513 columns

In [4]:
type(data)
Out[4]:
pandas.core.frame.DataFrame
In [5]:
data["dataset_name"]
Out[5]:
0                       Candela_Africa
1                       Candela_Africa
2                       Candela_Africa
3                       Candela_Africa
4                       Candela_Africa
                     ...              
3605    Zeller_fecal_colorectal_cancer
3606    Zeller_fecal_colorectal_cancer
3607    Zeller_fecal_colorectal_cancer
3608    Zeller_fecal_colorectal_cancer
3609    Zeller_fecal_colorectal_cancer
Name: dataset_name, Length: 3610, dtype: object
In [6]:
type(data["dataset_name"])
Out[6]:
pandas.core.series.Series

Inspecting Data in Pandas¶

In [7]:
data.head()
Out[7]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 Candela_Africa H10 h10 stool n 40 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 Candela_Africa H11 h11 stool n 29 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 Candela_Africa H12 h12 stool n 8 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 Candela_Africa H13 h13 stool n 34 male tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 Candela_Africa H14 h14 stool n 30 male tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

5 rows × 3513 columns

In [9]:
data.tail()
Out[9]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
3605 Zeller_fecal_colorectal_cancer CCIS95409808ST-4-0 fr-152 stool n 63 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3606 Zeller_fecal_colorectal_cancer CCIS96387239ST-4-0 fr-626 stool small_adenoma 66 male france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3607 Zeller_fecal_colorectal_cancer CCIS98482370ST-3-0 fr-052 stool n 53 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 Zeller_fecal_colorectal_cancer CCIS98512455ST-4-0 fr-459 stool cancer 63 male france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 Zeller_fecal_colorectal_cancer CCIS98832363ST-4-0 fr-552 stool cancer 55 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

5 rows × 3513 columns

In [10]:
data.size
Out[10]:
12681930
In [11]:
data.columns
Out[11]:
Index(['dataset_name', 'sampleID', 'subjectID', 'bodysite', 'disease', 'age',
       'gender', 'country', 'sequencing_technology', 'pubmedid',
       ...
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified',
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis',
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855',
       'k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1',
       'k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965'],
      dtype='object', length=3513)
In [12]:
data.dtypes
Out[12]:
dataset_name                                                                                                                                         object
sampleID                                                                                                                                             object
subjectID                                                                                                                                            object
bodysite                                                                                                                                             object
disease                                                                                                                                              object
                                                                                                                                                     ...   
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis                          float64
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085         float64
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855    float64
k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1                          float64
k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965         float64
Length: 3513, dtype: object
In [13]:
data.info()

<class 'pandas.core.frame.DataFrame'>
RangeIndex: 3610 entries, 0 to 3609
Columns: 3513 entries, dataset_name to k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
dtypes: float64(3302), object(211)
memory usage: 96.8+ MB
In [14]:
data.shape
Out[14]:
(3610, 3513)
In [15]:
data.describe()
Out[15]:
k__Archaea k__Archaea|p__Euryarchaeota k__Archaea|p__Euryarchaeota|c__Methanobacteria k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii|t__Methanobrevibacter_smithii_unclassified k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_unclassified k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanosphaera ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
count 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 ... 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000
mean 0.390213 0.390213 0.390008 0.390008 0.390008 0.381022 0.368204 0.368204 0.012818 0.008840 ... 0.000025 0.000014 0.000014 0.000022 0.000022 0.000022 0.000022 0.000259 0.000256 0.000256
std 2.177087 2.177087 2.176751 2.176751 2.176751 2.150313 2.125308 2.125308 0.109553 0.098988 ... 0.000799 0.000862 0.000862 0.001334 0.001334 0.001334 0.001334 0.015542 0.015385 0.015385
min 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 ... 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
25% 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 ... 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
50% 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 ... 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
75% 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 ... 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
max 49.058170 49.058170 49.058170 49.058170 49.058170 49.058170 49.058170 49.058170 2.661680 3.767280 ... 0.037560 0.051770 0.051770 0.080130 0.080130 0.080130 0.080130 0.933800 0.924370 0.924370

8 rows × 3302 columns

In [16]:
data.describe(include="O")
Out[16]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... statins insulin oral_anti-diabetic_medication years_in_sweden tnm_stage ajcc_stage localization fobt wif-1_gene_methylation_test group
count 3610 3610 3610 3610 3610 3610 3610 3610 3610 3610 ... 3610 3610 3610 3610 3610 3610 3610 3610 3610 3610
unique 18 3367 1897 25 20 255 6 19 1 19 ... 3 3 4 14 15 6 7 3 4 4
top hmp MH0046 hv07 stool n nd male usa Illumina 22699609 ... nd nd nd nd nd nd nd nd nd nd
freq 762 3 30 1989 2054 2078 1398 1533 3610 731 ... 3465 3465 3465 3465 3476 3476 3476 3476 3476 3476

4 rows × 211 columns

In [18]:
data.head()
Out[18]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 Candela_Africa H10 h10 stool n 40 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 Candela_Africa H11 h11 stool n 29 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 Candela_Africa H12 h12 stool n 8 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 Candela_Africa H13 h13 stool n 34 male tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 Candela_Africa H14 h14 stool n 30 male tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

5 rows × 3513 columns

In [19]:
data.shape
Out[19]:
(3610, 3513)
In [20]:
data.duplicated()
Out[20]:
0       False
1       False
2       False
3       False
4       False
        ...  
3605    False
3606    False
3607    False
3608    False
3609    False
Length: 3610, dtype: bool

Selecting Columns in Pandas¶

In [21]:
data.columns
Out[21]:
Index(['dataset_name', 'sampleID', 'subjectID', 'bodysite', 'disease', 'age',
       'gender', 'country', 'sequencing_technology', 'pubmedid',
       ...
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified',
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis',
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855',
       'k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1',
       'k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965'],
      dtype='object', length=3513)
In [22]:
# Sophisticated way of selecting a column,bracket notation
data["gender"]
Out[22]:
0       female
1       female
2       female
3         male
4         male
         ...  
3605    female
3606      male
3607    female
3608      male
3609    female
Name: gender, Length: 3610, dtype: object
In [23]:
# lazy way of selecting,the dot notation
data.gender
Out[23]:
0       female
1       female
2       female
3         male
4         male
         ...  
3605    female
3606      male
3607    female
3608      male
3609    female
Name: gender, Length: 3610, dtype: object
In [24]:
data["country"]
Out[24]:
0       tanzania
1       tanzania
2       tanzania
3       tanzania
4       tanzania
          ...   
3605      france
3606      france
3607      france
3608      france
3609      france
Name: country, Length: 3610, dtype: object
In [25]:
data[["country" ,"sequencing_technology", "gender"]]
Out[25]:
country sequencing_technology gender
0 tanzania Illumina female
1 tanzania Illumina female
2 tanzania Illumina female
3 tanzania Illumina male
4 tanzania Illumina male
... ... ... ...
3605 france Illumina female
3606 france Illumina male
3607 france Illumina female
3608 france Illumina male
3609 france Illumina female

3610 rows × 3 columns

In [26]:
data._get_numeric_data()
Out[26]:
k__Archaea k__Archaea|p__Euryarchaeota k__Archaea|p__Euryarchaeota|c__Methanobacteria k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii|t__Methanobrevibacter_smithii_unclassified k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_unclassified k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanosphaera ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 0.24169 0.24169 0.24169 0.24169 0.24169 0.24169 0.24169 0.24169 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 0.50621 0.50621 0.50621 0.50621 0.50621 0.50621 0.50621 0.50621 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 0.30522 0.30522 0.30522 0.30522 0.30522 0.30522 0.30522 0.30522 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 0.40133 0.40133 0.40133 0.40133 0.40133 0.35994 0.35994 0.35994 0.00000 0.04139 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 0.17479 0.17479 0.17479 0.17479 0.17479 0.16331 0.15280 0.15280 0.01051 0.01148 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3605 6.59835 6.59835 6.59835 6.59835 6.59835 6.59835 6.59835 6.59835 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3606 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3607 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 0.17495 0.17495 0.17495 0.17495 0.17495 0.17495 0.16890 0.16890 0.00605 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 0.08997 0.08997 0.08997 0.08997 0.08997 0.08997 0.00135 0.00135 0.08861 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3302 columns

In [27]:
data.select_dtypes("object")
Out[27]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... statins insulin oral_anti-diabetic_medication years_in_sweden tnm_stage ajcc_stage localization fobt wif-1_gene_methylation_test group
0 Candela_Africa H10 h10 stool n 40 female tanzania Illumina 25981789 ... nd nd nd nd nd nd nd nd nd nd
1 Candela_Africa H11 h11 stool n 29 female tanzania Illumina 25981789 ... nd nd nd nd nd nd nd nd nd nd
2 Candela_Africa H12 h12 stool n 8 female tanzania Illumina 25981789 ... nd nd nd nd nd nd nd nd nd nd
3 Candela_Africa H13 h13 stool n 34 male tanzania Illumina 25981789 ... nd nd nd nd nd nd nd nd nd nd
4 Candela_Africa H14 h14 stool n 30 male tanzania Illumina 25981789 ... nd nd nd nd nd nd nd nd nd nd
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3605 Zeller_fecal_colorectal_cancer CCIS95409808ST-4-0 fr-152 stool n 63 female france Illumina 25432777 ... nd nd nd nd na na na negative negative control
3606 Zeller_fecal_colorectal_cancer CCIS96387239ST-4-0 fr-626 stool small_adenoma 66 male france Illumina 25432777 ... nd nd nd nd na na lc negative negative control
3607 Zeller_fecal_colorectal_cancer CCIS98482370ST-3-0 fr-052 stool n 53 female france Illumina 25432777 ... nd nd nd nd na na na negative negative control
3608 Zeller_fecal_colorectal_cancer CCIS98512455ST-4-0 fr-459 stool cancer 63 male france Illumina 25432777 ... nd nd nd nd t4n1m1 iv rc negative negative crc
3609 Zeller_fecal_colorectal_cancer CCIS98832363ST-4-0 fr-552 stool cancer 55 female france Illumina 25432777 ... nd nd nd nd t3n1m0 iii lc positive negative crc

3610 rows × 211 columns

In [28]:
data.select_dtypes("float")
Out[28]:
k__Archaea k__Archaea|p__Euryarchaeota k__Archaea|p__Euryarchaeota|c__Methanobacteria k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii|t__Methanobrevibacter_smithii_unclassified k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_unclassified k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanosphaera ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 0.24169 0.24169 0.24169 0.24169 0.24169 0.24169 0.24169 0.24169 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 0.50621 0.50621 0.50621 0.50621 0.50621 0.50621 0.50621 0.50621 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 0.30522 0.30522 0.30522 0.30522 0.30522 0.30522 0.30522 0.30522 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 0.40133 0.40133 0.40133 0.40133 0.40133 0.35994 0.35994 0.35994 0.00000 0.04139 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 0.17479 0.17479 0.17479 0.17479 0.17479 0.16331 0.15280 0.15280 0.01051 0.01148 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3605 6.59835 6.59835 6.59835 6.59835 6.59835 6.59835 6.59835 6.59835 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3606 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3607 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 0.17495 0.17495 0.17495 0.17495 0.17495 0.17495 0.16890 0.16890 0.00605 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 0.08997 0.08997 0.08997 0.08997 0.08997 0.08997 0.00135 0.00135 0.08861 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3302 columns

In [29]:
data.select_dtypes("int")
Out[29]:
0
1
2
3
4
...
3605
3606
3607
3608
3609

3610 rows × 0 columns

In [30]:
data.select_dtypes("number")
Out[30]:
k__Archaea k__Archaea|p__Euryarchaeota k__Archaea|p__Euryarchaeota|c__Methanobacteria k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii|t__Methanobrevibacter_smithii_unclassified k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_unclassified k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanosphaera ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 0.24169 0.24169 0.24169 0.24169 0.24169 0.24169 0.24169 0.24169 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 0.50621 0.50621 0.50621 0.50621 0.50621 0.50621 0.50621 0.50621 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 0.30522 0.30522 0.30522 0.30522 0.30522 0.30522 0.30522 0.30522 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 0.40133 0.40133 0.40133 0.40133 0.40133 0.35994 0.35994 0.35994 0.00000 0.04139 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 0.17479 0.17479 0.17479 0.17479 0.17479 0.16331 0.15280 0.15280 0.01051 0.01148 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3605 6.59835 6.59835 6.59835 6.59835 6.59835 6.59835 6.59835 6.59835 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3606 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3607 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 0.17495 0.17495 0.17495 0.17495 0.17495 0.17495 0.16890 0.16890 0.00605 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 0.08997 0.08997 0.08997 0.08997 0.08997 0.08997 0.00135 0.00135 0.08861 0.00000 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3302 columns

In [31]:
data.select_dtypes(["object", "int"])
Out[31]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... statins insulin oral_anti-diabetic_medication years_in_sweden tnm_stage ajcc_stage localization fobt wif-1_gene_methylation_test group
0 Candela_Africa H10 h10 stool n 40 female tanzania Illumina 25981789 ... nd nd nd nd nd nd nd nd nd nd
1 Candela_Africa H11 h11 stool n 29 female tanzania Illumina 25981789 ... nd nd nd nd nd nd nd nd nd nd
2 Candela_Africa H12 h12 stool n 8 female tanzania Illumina 25981789 ... nd nd nd nd nd nd nd nd nd nd
3 Candela_Africa H13 h13 stool n 34 male tanzania Illumina 25981789 ... nd nd nd nd nd nd nd nd nd nd
4 Candela_Africa H14 h14 stool n 30 male tanzania Illumina 25981789 ... nd nd nd nd nd nd nd nd nd nd
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3605 Zeller_fecal_colorectal_cancer CCIS95409808ST-4-0 fr-152 stool n 63 female france Illumina 25432777 ... nd nd nd nd na na na negative negative control
3606 Zeller_fecal_colorectal_cancer CCIS96387239ST-4-0 fr-626 stool small_adenoma 66 male france Illumina 25432777 ... nd nd nd nd na na lc negative negative control
3607 Zeller_fecal_colorectal_cancer CCIS98482370ST-3-0 fr-052 stool n 53 female france Illumina 25432777 ... nd nd nd nd na na na negative negative control
3608 Zeller_fecal_colorectal_cancer CCIS98512455ST-4-0 fr-459 stool cancer 63 male france Illumina 25432777 ... nd nd nd nd t4n1m1 iv rc negative negative crc
3609 Zeller_fecal_colorectal_cancer CCIS98832363ST-4-0 fr-552 stool cancer 55 female france Illumina 25432777 ... nd nd nd nd t3n1m0 iii lc positive negative crc

3610 rows × 211 columns

In [32]:
data[[col for col in data.columns if data[col].nunique() <50]]
Out[32]:
dataset_name bodysite disease gender country sequencing_technology pubmedid camp read_length gene_count_class ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 Candela_Africa stool n female tanzania Illumina 25981789 dedauko nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 Candela_Africa stool n female tanzania Illumina 25981789 dedauko nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 Candela_Africa stool n female tanzania Illumina 25981789 dedauko nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 Candela_Africa stool n male tanzania Illumina 25981789 dedauko nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 Candela_Africa stool n male tanzania Illumina 25981789 dedauko nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3605 Zeller_fecal_colorectal_cancer stool n female france Illumina 25432777 nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3606 Zeller_fecal_colorectal_cancer stool small_adenoma male france Illumina 25432777 nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3607 Zeller_fecal_colorectal_cancer stool n female france Illumina 25432777 nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 Zeller_fecal_colorectal_cancer stool cancer male france Illumina 25432777 nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 Zeller_fecal_colorectal_cancer stool cancer female france Illumina 25432777 nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 2024 columns

Methods vs. Attributes¶

In [33]:
data
Out[33]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 Candela_Africa H10 h10 stool n 40 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 Candela_Africa H11 h11 stool n 29 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 Candela_Africa H12 h12 stool n 8 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 Candela_Africa H13 h13 stool n 34 male tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 Candela_Africa H14 h14 stool n 30 male tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3605 Zeller_fecal_colorectal_cancer CCIS95409808ST-4-0 fr-152 stool n 63 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3606 Zeller_fecal_colorectal_cancer CCIS96387239ST-4-0 fr-626 stool small_adenoma 66 male france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3607 Zeller_fecal_colorectal_cancer CCIS98482370ST-3-0 fr-052 stool n 53 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 Zeller_fecal_colorectal_cancer CCIS98512455ST-4-0 fr-459 stool cancer 63 male france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 Zeller_fecal_colorectal_cancer CCIS98832363ST-4-0 fr-552 stool cancer 55 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3513 columns

In [34]:
data.drop(columns="dataset_name")
Out[34]:
sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid camp ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 H10 h10 stool n 40 female tanzania Illumina 25981789 dedauko ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 H11 h11 stool n 29 female tanzania Illumina 25981789 dedauko ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 H12 h12 stool n 8 female tanzania Illumina 25981789 dedauko ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 H13 h13 stool n 34 male tanzania Illumina 25981789 dedauko ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 H14 h14 stool n 30 male tanzania Illumina 25981789 dedauko ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3605 CCIS95409808ST-4-0 fr-152 stool n 63 female france Illumina 25432777 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3606 CCIS96387239ST-4-0 fr-626 stool small_adenoma 66 male france Illumina 25432777 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3607 CCIS98482370ST-3-0 fr-052 stool n 53 female france Illumina 25432777 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 CCIS98512455ST-4-0 fr-459 stool cancer 63 male france Illumina 25432777 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 CCIS98832363ST-4-0 fr-552 stool cancer 55 female france Illumina 25432777 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3512 columns

In [35]:
data.drop(columns="dataset_name").shape
Out[35]:
(3610, 3512)
In [36]:
data.describe()
Out[36]:
k__Archaea k__Archaea|p__Euryarchaeota k__Archaea|p__Euryarchaeota|c__Methanobacteria k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii|t__Methanobrevibacter_smithii_unclassified k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_unclassified k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanosphaera ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
count 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 ... 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000 3610.000000
mean 0.390213 0.390213 0.390008 0.390008 0.390008 0.381022 0.368204 0.368204 0.012818 0.008840 ... 0.000025 0.000014 0.000014 0.000022 0.000022 0.000022 0.000022 0.000259 0.000256 0.000256
std 2.177087 2.177087 2.176751 2.176751 2.176751 2.150313 2.125308 2.125308 0.109553 0.098988 ... 0.000799 0.000862 0.000862 0.001334 0.001334 0.001334 0.001334 0.015542 0.015385 0.015385
min 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 ... 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
25% 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 ... 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
50% 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 ... 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
75% 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 ... 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000
max 49.058170 49.058170 49.058170 49.058170 49.058170 49.058170 49.058170 49.058170 2.661680 3.767280 ... 0.037560 0.051770 0.051770 0.080130 0.080130 0.080130 0.080130 0.933800 0.924370 0.924370

8 rows × 3302 columns

In [37]:
data["age"]
Out[37]:
0       40
1       29
2        8
3       34
4       30
        ..
3605    63
3606    66
3607    53
3608    63
3609    55
Name: age, Length: 3610, dtype: object
In [38]:
data["age"].value_counts()
Out[38]:
age
nd       2078
49         62
59         61
54         52
41         40
         ... 
70.06       1
70.7        1
68.98       1
70.34       1
65          1
Name: count, Length: 255, dtype: int64
In [39]:
data["age"].value_counts(normalize=True)
Out[39]:
age
nd       0.575623
49       0.017175
59       0.016898
54       0.014404
41       0.011080
           ...   
70.06    0.000277
70.7     0.000277
68.98    0.000277
70.34    0.000277
65       0.000277
Name: proportion, Length: 255, dtype: float64

Intuition or Common sense in Pandas¶

In [40]:
age = data["age"]
In [41]:
type(age)
Out[41]:
pandas.core.series.Series
In [42]:
type(data)
Out[42]:
pandas.core.frame.DataFrame
In [43]:
data.shape
Out[43]:
(3610, 3513)
In [44]:
age.shape
Out[44]:
(3610,)
In [45]:
data.columns
Out[45]:
Index(['dataset_name', 'sampleID', 'subjectID', 'bodysite', 'disease', 'age',
       'gender', 'country', 'sequencing_technology', 'pubmedid',
       ...
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified',
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis',
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855',
       'k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1',
       'k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965'],
      dtype='object', length=3513)
In [46]:
data["sequencing_technology"]
Out[46]:
0       Illumina
1       Illumina
2       Illumina
3       Illumina
4       Illumina
          ...   
3605    Illumina
3606    Illumina
3607    Illumina
3608    Illumina
3609    Illumina
Name: sequencing_technology, Length: 3610, dtype: object
In [47]:
data["sequencing_technology"].value_counts()
Out[47]:
sequencing_technology
Illumina    3610
Name: count, dtype: int64
In [48]:
data.value_counts()
Out[48]:
dataset_name      sampleID   subjectID  bodysite                 disease  age  gender  country   sequencing_technology  pubmedid  camp     paired_end_insert_size  read_length  total_reads  matched_reads  uniquely_matching_reads  uniquely_matched_reads  gene_number  gene_number_for_11m_uniquely_matched_reads  hitchip_probe_number  bmi    gene_count_class  hitchip_probe_class  #SampleID            rna_sampleid  infant_gender  infant_gestation_weeks  cohort  less_than_29weeks  sample_collection_days  collectionweek  samplecollectionwindow  gut_sample_id_ncbipublic  gut_sample_id_corrected  projectid  flowcell  comment  mlst_project  mlst_ec  st_ec  mlst_kp  st_kp  extractionprotocolid  site_id_cincinnati  delivery_mode  infant_ethnicity  infant_race  birth_year  necrotizing_enterocolitis  dol_firstnecors  sepsis  infant_birthweight_kg  infant_birth_length_cm  maternal_abx_given  postnatal_antimicrobial_use  postnatal_abx_2window  perinatal_antimicrobial_use  death  nursing_status  maternal_age_at_delivery_years  mat_age_bin  parity  infant_fut2  mat_fut2  lowh  lowlea  highslea  married  gravida  preeclampsia  mult_birth  hypertension  hypertension_prepreg  chorioamnionitis  primipar  daysonform3daysprior  days_on_abx_14  visit_number  snprnt     wmsphase  first  repeat  stooltexture  daysafteronset  hus  stec_count  shigatoxin2elisa  readsmillions  nonhuman  stec_coverage  stxab_detected  stx_ratio  typingdata  c_difficile_frequency  ibd  sampling_day  known_consumers_of_a_defined_fermented_milk_product_(dfmp)  mgs_richness  mgs_profile_matched_sample_pairs  ethnicity  sample_name  index_2_primer  index_1_primer  sample_name_repeat1  extraction_conc  sampleid_with_barcode  initial_nreads  quality_control  screensensloc_hg19  screensensloc_phix174  screenhiv  percent_initial_reads  percent_qc_reads  tipo_prelievo  prima_dopo_cura  codice_provetta  data  prelievo_efemalefemaleettuato_presso  patient_number  pasi  bsa  age_ofemale_onset  arthritis  type  antibiotic_usage  stage    cirrhotic  hbv_related  alcohol_related  other_causes_related  inr  crea  alb  tb  pt  ascites  he  ctp  meld  antivirus  ?-blocker  designation               age_range  site_symmetry  affected/unaffected  method  site_characteristic  total_intital_reads  estimated_median_insert_size  reported_as_failed_qc  uniquely_align_to_human  non_uniquely_align_to_human_with_0_2_mismatches  reads_removed_because_of_read_pair_trimming_discrepancy  too_short_after_quality_trimming(<50bp)  final_#_paired_reads  final_#_singletons  total_final_reads  %_reads_kept_by_mean_slope_of_last_5_points_(coverage)  population  bmi_class  16s_rrna  shotgun_metagenome  read_depth_16s  paired  single  height  weight  diabetic  fbg   sbp  dbp  fins  fcp  hbalc  tg    tcho  hdl   ldl   kit  sample_group  illumina_run  classification  gad-antibodies  whr  wc  cholesterol  triglycerides  creatinine  y-gt  fasting_glucose  fasting_insulin  hba1c  adiponectin  leptin  glp-1  fgf-19  hscrp  c-peptide  tnfa  il-1  cd163  statins  insulin  oral_anti-diabetic_medication  years_in_sweden  tnm_stage  ajcc_stage  localization  fobt  wif-1_gene_methylation_test  group  k__Archaea  k__Archaea|p__Euryarchaeota  k__Archaea|p__Euryarchaeota|c__Methanobacteria  k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales  k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae  k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter  k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii  k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_smithii|t__Methanobrevibacter_smithii_unclassified  k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobrevibacter|s__Methanobrevibacter_unclassified  k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanosphaera  k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanosphaera|s__Methanosphaera_stadtmanae  k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanosphaera|s__Methanosphaera_stadtmanae|t__GCF_000012545  k__Bacteria  k__Bacteria|p__Acidobacteria  k__Bacteria|p__Acidobacteria|c__Acidobacteriia  k__Bacteria|p__Acidobacteria|c__Acidobacteriia|o__Acidobacteriales  k__Bacteria|p__Acidobacteria|c__Acidobacteriia|o__Acidobacteriales|f__Acidobacteriaceae  k__Bacteria|p__Acidobacteria|c__Acidobacteriia|o__Acidobacteriales|f__Acidobacteriaceae|g__Acidobacteriaceae_unclassified  k__Bacteria|p__Actinobacteria  k__Bacteria|p__Actinobacteria|c__Actinobacteria  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_graevenitzii  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_graevenitzii|t__Actinomyces_graevenitzii_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_odontolyticus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_odontolyticus|t__Actinomyces_odontolyticus_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_turicensis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_turicensis|t__GCF_000296505  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Varibaculum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Varibaculum|s__Varibaculum_cambriense  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Varibaculum|s__Varibaculum_cambriense|t__GCF_000420065  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Rothia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Rothia|s__Rothia_mucilaginosa  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Rothia|s__Rothia_mucilaginosa|t__Rothia_mucilaginosa_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Rothia|s__Rothia_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_adolescentis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_adolescentis|t__Bifidobacterium_adolescentis_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_angulatum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_angulatum|t__GCF_000156635  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_bifidum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_bifidum|t__Bifidobacterium_bifidum_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_catenulatum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_catenulatum|t__GCF_000173455  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_longum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_longum|t__Bifidobacterium_longum_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_pseudocatenulatum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_pseudocatenulatum|t__GCF_000173435  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Gardnerella  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Gardnerella|s__Gardnerella_vaginalis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Gardnerella|s__Gardnerella_vaginalis|t__Gardnerella_vaginalis_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Adlercreutzia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Adlercreutzia|s__Adlercreutzia_equolifaciens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Adlercreutzia|s__Adlercreutzia_equolifaciens|t__GCF_000478885  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_parvulum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_parvulum|t__GCF_000024225  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_rimae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_rimae|t__GCF_000174015  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_aerofaciens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_aerofaciens|t__GCF_000169035  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Coriobacteriaceae_noname  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Coriobacteriaceae_noname|s__Coriobacteriaceae_bacterium_phI  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Coriobacteriaceae_noname|s__Coriobacteriaceae_bacterium_phI|t__GCF_000311845  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Eggerthella  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Eggerthella|s__Eggerthella_lenta  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Eggerthella|s__Eggerthella_lenta|t__GCF_000024265  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Eggerthella|s__Eggerthella_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Gordonibacter  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Gordonibacter|s__Gordonibacter_pamelaeae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Gordonibacter|s__Gordonibacter_pamelaeae|t__GCF_000210055  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Olsenella  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Olsenella|s__Olsenella_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Slackia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Slackia|s__Slackia_piriformis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Slackia|s__Slackia_piriformis|t__GCF_000296445  k__Bacteria|p__Bacteroidetes  k__Bacteria|p__Bacteroidetes|c__Bacteroidia  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_barnesiae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_barnesiae|t__GCF_000374585  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_caccae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_caccae|t__Bacteroides_caccae_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_cellulosilyticus  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_cellulosilyticus|t__Bacteroides_cellulosilyticus_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_clarus  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_clarus|t__GCF_000195615  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_coprocola  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_coprocola|t__GCF_000154845  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_coprophilus  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_coprophilus|t__GCF_000157915  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_dorei  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_dorei|t__Bacteroides_dorei_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_eggerthii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_eggerthii|t__Bacteroides_eggerthii_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_faecis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_faecis|t__GCF_000226135  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_finegoldii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_finegoldii|t__Bacteroides_finegoldii_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_fragilis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_fragilis|t__Bacteroides_fragilis_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_intestinalis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_intestinalis|t__GCF_000172175  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_massiliensis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_massiliensis|t__Bacteroides_massiliensis_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_nordii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_nordii|t__GCF_000273175  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_ovatus  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_ovatus|t__Bacteroides_ovatus_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_plebeius  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_plebeius|t__GCF_000187895  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_salyersiae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_salyersiae|t__Bacteroides_salyersiae_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_4_3_47FAA  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_4_3_47FAA|t__GCF_000158515  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_stercoris  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_stercoris|t__Bacteroides_stercoris_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_thetaiotaomicron  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_thetaiotaomicron|t__Bacteroides_thetaiotaomicron_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_uniformis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_uniformis|t__Bacteroides_uniformis_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_uniformis|t__GCF_000154205  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_vulgatus  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_vulgatus|t__Bacteroides_vulgatus_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_xylanisolvens  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_xylanisolvens|t__Bacteroides_xylanisolvens_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidales_noname  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidales_noname|g__Bacteroidales_noname  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidales_noname|g__Bacteroidales_noname|s__Bacteroidales_bacterium_ph8  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidales_noname|g__Bacteroidales_noname|s__Bacteroidales_bacterium_ph8|t__GCF_000311925  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Barnesiella  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Barnesiella|s__Barnesiella_intestinihominis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Barnesiella|s__Barnesiella_intestinihominis|t__GCF_000296465  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Coprobacter  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Coprobacter|s__Coprobacter_fastidiosus  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Coprobacter|s__Coprobacter_fastidiosus|t__GCF_000473955  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Odoribacter  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Odoribacter|s__Odoribacter_splanchnicus  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Odoribacter|s__Odoribacter_splanchnicus|t__GCF_000190535  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Odoribacter|s__Odoribacter_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_distasonis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_distasonis|t__Parabacteroides_distasonis_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_goldsteinii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_goldsteinii|t__Parabacteroides_goldsteinii_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_merdae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_merdae|t__Parabacteroides_merdae_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_asaccharolytica  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_asaccharolytica|t__Porphyromonas_asaccharolytica_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_bennonis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_bennonis|t__GCF_000375645  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_somerae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_somerae|t__GCF_000372405  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_uenonis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_uenonis|t__GCF_000174775  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Alloprevotella  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Alloprevotella|s__Alloprevotella_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Paraprevotella  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Paraprevotella|s__Paraprevotella_clara  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Paraprevotella|s__Paraprevotella_clara|t__GCF_000233955  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Paraprevotella|s__Paraprevotella_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Paraprevotella|s__Paraprevotella_xylaniphila  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Paraprevotella|s__Paraprevotella_xylaniphila|t__GCF_000205165  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_bivia  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_bivia|t__Prevotella_bivia_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_copri  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_copri|t__GCF_000157935  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_disiens  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_disiens|t__Prevotella_disiens_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_stercorea  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_stercorea|t__GCF_000235885  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_timonensis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_timonensis|t__GCF_000177055  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_finegoldii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_finegoldii|t__GCF_000265365  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_indistinctus  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_indistinctus|t__GCF_000231275  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_onderdonkii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_onderdonkii|t__GCF_000374505  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_putredinis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_putredinis|t__GCF_000154465  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_senegalensis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_senegalensis|t__GCF_000312145  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_shahii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_shahii|t__GCF_000210575  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_sp_AP11  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_sp_AP11|t__GCF_000321205  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_unclassified  k__Bacteria|p__Cyanobacteria  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Microcoleus  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Microcoleus|s__Microcoleus_unclassified  k__Bacteria|p__Firmicutes  k__Bacteria|p__Firmicutes|c__Bacilli  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Granulicatella  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Granulicatella|s__Granulicatella_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_faecium  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_faecium|t__Enterococcus_faecium_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_animalis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_animalis|t__GCF_000183825  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_delbrueckii  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_delbrueckii|t__Lactobacillus_delbrueckii_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_fermentum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_fermentum|t__Lactobacillus_fermentum_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_mucosae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_mucosae|t__GCF_000248095  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_ruminis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_ruminis|t__Lactobacillus_ruminis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_sakei  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_sakei|t__Lactobacillus_sakei_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_lactis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_lactis|t__Leuconostoc_lactis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_pseudomesenteroides  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_pseudomesenteroides|t__Leuconostoc_pseudomesenteroides_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Weissella  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Weissella|s__Weissella_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Lactococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Lactococcus|s__Lactococcus_lactis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Lactococcus|s__Lactococcus_lactis|t__Lactococcus_lactis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_anginosus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_anginosus|t__Streptococcus_anginosus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_australis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_australis|t__Streptococcus_australis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_gordonii  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_gordonii|t__GCF_000017005  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_infantarius  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_infantarius|t__Streptococcus_infantarius_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_infantis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_infantis|t__Streptococcus_infantis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_lutetiensis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_lutetiensis|t__GCF_000441535  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_mitis_oralis_pneumoniae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_mitis_oralis_pneumoniae|t__Streptococcus_mitis_oralis_pneumoniae_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_parasanguinis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_parasanguinis|t__Streptococcus_parasanguinis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_salivarius  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_salivarius|t__Streptococcus_salivarius_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_thermophilus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_thermophilus|t__Streptococcus_thermophilus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_vestibularis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_vestibularis|t__Streptococcus_vestibularis_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_asparagiforme  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_asparagiforme|t__GCF_000158075  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_bolteae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_bolteae|t__Clostridium_bolteae_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_citroniae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_citroniae|t__GCF_000233455  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_clostridioforme  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_clostridioforme|t__Clostridium_clostridioforme_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_hathewayi  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_hathewayi|t__Clostridium_hathewayi_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_leptum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_leptum|t__GCF_000154345  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_methylpentosum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_methylpentosum|t__GCF_000158655  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_nexile  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_nexile|t__GCF_000156035  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_perfringens  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_perfringens|t__Clostridium_perfringens_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_L2_50  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_L2_50|t__GCF_000154245  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_symbiosum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_symbiosum|t__Clostridium_symbiosum_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_vaginalis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_vaginalis|t__GCF_000163295  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Parvimonas  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Parvimonas|s__Parvimonas_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_duerdenii  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_duerdenii|t__GCF_000146345  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_lacrimalis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_lacrimalis|t__Peptoniphilus_lacrimalis_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Clostridiales_noname  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Clostridiales_noname|s__Bacteroides_pectinophilus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Clostridiales_noname|s__Bacteroides_pectinophilus|t__GCF_000155855  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Clostridiales_noname|s__Clostridiales_bacterium_1_7_47FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Clostridiales_noname|s__Clostridiales_bacterium_1_7_47FAA|t__GCF_000155435  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Clostridiales_noname|s__Clostridiales_genomosp_BVAB3  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Clostridiales_noname|s__Clostridiales_genomosp_BVAB3|t__GCF_000025225  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Flavonifractor  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Flavonifractor|s__Flavonifractor_plautii  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Flavonifractor|s__Flavonifractor_plautii|t__GCF_000239295  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Pseudoflavonifractor  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Pseudoflavonifractor|s__Pseudoflavonifractor_capillosus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_noname|g__Pseudoflavonifractor|s__Pseudoflavonifractor_capillosus|t__GCF_000169255  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_brachy  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_brachy|t__GCF_000488855  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_eligens  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_eligens|t__GCF_000146185  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_hallii  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_hallii|t__GCF_000173975  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_ramulus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_ramulus|t__GCF_000469345  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_rectale  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_rectale|t__Eubacterium_rectale_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_siraeum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_siraeum|t__Eubacterium_siraeum_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_ventriosum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_ventriosum|t__GCF_000153885  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Anaerostipes  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Anaerostipes|s__Anaerostipes_hadrus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Anaerostipes|s__Anaerostipes_hadrus|t__GCF_000332875  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Blautia_hydrogenotrophica  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Blautia_hydrogenotrophica|t__GCF_000157975  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Ruminococcus_gnavus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Ruminococcus_gnavus|t__Ruminococcus_gnavus_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Ruminococcus_obeum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Ruminococcus_obeum|t__Ruminococcus_obeum_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Ruminococcus_torques  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Ruminococcus_torques|t__Ruminococcus_torques_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Butyrivibrio  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Butyrivibrio|s__Butyrivibrio_crossotus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Butyrivibrio|s__Butyrivibrio_crossotus|t__GCF_000156015  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Butyrivibrio|s__Butyrivibrio_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Coprococcus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Coprococcus|s__Coprococcus_catus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Coprococcus|s__Coprococcus_catus|t__GCF_000210555  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Coprococcus|s__Coprococcus_comes  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Coprococcus|s__Coprococcus_comes|t__GCF_000155875  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Coprococcus|s__Coprococcus_eutactus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Coprococcus|s__Coprococcus_eutactus|t__GCF_000154425  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Coprococcus|s__Coprococcus_sp_ART55_1  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Coprococcus|s__Coprococcus_sp_ART55_1|t__GCF_000210595  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Dorea  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Dorea|s__Dorea_formicigenerans  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Dorea|s__Dorea_formicigenerans|t__Dorea_formicigenerans_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Dorea|s__Dorea_longicatena  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Dorea|s__Dorea_longicatena|t__GCF_000154065  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Dorea|s__Dorea_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_1_1_57FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_1_1_57FAA|t__GCF_000218445  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_1_4_56FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_1_4_56FAA|t__GCF_000218385  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_2_1_58FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_2_1_58FAA|t__GCF_000218465  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_3_1_46FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_3_1_46FAA|t__GCF_000209405  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_3_1_57FAA_CT1  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_3_1_57FAA_CT1|t__GCF_000218405  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_4_1_37FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_4_1_37FAA|t__GCF_000191805  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_5_1_63FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_5_1_63FAA|t__GCF_000185525  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_7_1_58FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_7_1_58FAA|t__GCF_000242155  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_8_1_57FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_8_1_57FAA|t__GCF_000185545  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_9_1_43BFAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_9_1_43BFAA|t__GCF_000209445  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Roseburia  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Roseburia|s__Roseburia_hominis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Roseburia|s__Roseburia_hominis|t__GCF_000225345  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Roseburia|s__Roseburia_intestinalis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Roseburia|s__Roseburia_intestinalis|t__Roseburia_intestinalis_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Roseburia|s__Roseburia_inulinivorans  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Roseburia|s__Roseburia_inulinivorans|t__GCF_000174195  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Roseburia|s__Roseburia_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Oscillospiraceae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Oscillospiraceae|g__Oscillibacter  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Oscillospiraceae|g__Oscillibacter|s__Oscillibacter_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Clostridium_bartlettii  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Clostridium_bartlettii|t__GCF_000154445  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Peptostreptococcaceae_noname_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcus|s__Peptostreptococcus_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Anaerotruncus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Anaerotruncus|s__Anaerotruncus_colihominis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Anaerotruncus|s__Anaerotruncus_colihominis|t__GCF_000154565  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Anaerotruncus|s__Anaerotruncus_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__Faecalibacterium_prausnitzii_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000162015  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000166035  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcaceae_noname  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcaceae_noname|s__Ruminococcaceae_bacterium_D16  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcaceae_noname|s__Ruminococcaceae_bacterium_D16|t__GCF_000177015  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_albus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_albus|t__Ruminococcus_albus_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_bromii  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_bromii|t__GCF_000209875  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_callidus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_callidus|t__GCF_000468015  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_champanellensis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_champanellensis|t__GCF_000210095  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_flavefaciens  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_flavefaciens|t__Ruminococcus_flavefaciens_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_lactaris  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_lactaris|t__Ruminococcus_lactaris_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_sp_5_1_39BFAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_sp_5_1_39BFAA|t__GCF_000159975  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Subdoligranulum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Subdoligranulum|s__Subdoligranulum_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Subdoligranulum|s__Subdoligranulum_variabile  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Subdoligranulum|s__Subdoligranulum_variabile|t__GCF_000157955  k__Bacteria|p__Firmicutes|c__Erysipelotrichia  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Catenibacterium  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Catenibacterium|s__Catenibacterium_mitsuokai  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Catenibacterium|s__Catenibacterium_mitsuokai|t__GCF_000173795  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Coprobacillus  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Coprobacillus|s__Coprobacillus_sp_29_1  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Coprobacillus|s__Coprobacillus_sp_29_1|t__GCF_000186525  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Coprobacillus|s__Coprobacillus_sp_D6  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Coprobacillus|s__Coprobacillus_sp_D6|t__GCF_000269565  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Clostridium_innocuum  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Clostridium_innocuum|t__GCF_000371425  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Erysipelotrichaceae_bacterium_2_2_44A  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Erysipelotrichaceae_bacterium_2_2_44A|t__GCF_000225685  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Erysipelotrichaceae_bacterium_6_1_45  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Erysipelotrichaceae_bacterium_6_1_45|t__GCF_000242175  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Eubacterium_biforme  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Eubacterium_biforme|t__GCF_000156655  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Eubacterium_cylindroides  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Eubacterium_cylindroides|t__GCF_000469305  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Holdemania  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Holdemania|s__Holdemania_filiformis  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Holdemania|s__Holdemania_filiformis|t__GCF_000157995  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Solobacterium  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Solobacterium|s__Solobacterium_moorei  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Solobacterium|s__Solobacterium_moorei|t__GCF_000186945  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Turicibacter  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Turicibacter|s__Turicibacter_sanguinis  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Turicibacter|s__Turicibacter_sanguinis|t__GCF_000178255  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Turicibacter|s__Turicibacter_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcaceae_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus|s__Acidaminococcus_fermentans  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus|s__Acidaminococcus_fermentans|t__GCF_000025305  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus|s__Acidaminococcus_intestini  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus|s__Acidaminococcus_intestini|t__GCF_000230275  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus|s__Acidaminococcus_sp_D21  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus|s__Acidaminococcus_sp_D21|t__GCF_000174215  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus|s__Acidaminococcus_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Phascolarctobacterium  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Phascolarctobacterium|s__Phascolarctobacterium_succinatutens  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Phascolarctobacterium|s__Phascolarctobacterium_succinatutens|t__GCF_000188175  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Dialister  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Dialister|s__Dialister_invisus  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Dialister|s__Dialister_invisus|t__GCF_000160055  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Dialister|s__Dialister_micraerophilus  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Dialister|s__Dialister_micraerophilus|t__Dialister_micraerophilus_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Dialister|s__Dialister_succinatiphilus  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Dialister|s__Dialister_succinatiphilus|t__GCF_000242435  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Mitsuokella  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Mitsuokella|s__Mitsuokella_multacida  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Mitsuokella|s__Mitsuokella_multacida|t__GCF_000155955  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Mitsuokella|s__Mitsuokella_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_atypica  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_atypica|t__Veillonella_atypica_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_dispar  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_dispar|t__GCF_000160015  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_parvula  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_parvula|t__Veillonella_parvula_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_unclassified  k__Bacteria|p__Fusobacteria  k__Bacteria|p__Fusobacteria|c__Fusobacteriia  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_gonidiaformans  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_gonidiaformans|t__Fusobacterium_gonidiaformans_unclassified  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_nucleatum  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_nucleatum|t__Fusobacterium_nucleatum_unclassified  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichiaceae_unclassified  k__Bacteria|p__Proteobacteria  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiales_noname  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiales_noname|g__Burkholderiales_noname  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiales_noname|g__Burkholderiales_noname|s__Burkholderiales_bacterium_1_1_47  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiales_noname|g__Burkholderiales_noname|s__Burkholderiales_bacterium_1_1_47|t__GCF_000144975  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Oxalobacter  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Oxalobacter|s__Oxalobacter_formigenes  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Oxalobacter|s__Oxalobacter_formigenes|t__GCF_000158495  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Oxalobacter|s__Oxalobacter_formigenes|t__Oxalobacter_formigenes_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Parasutterella  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Parasutterella|s__Parasutterella_excrementihominis  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Parasutterella|s__Parasutterella_excrementihominis|t__GCF_000205025  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Sutterella  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Sutterellaceae_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Sutterella|s__Sutterella_wadsworthensis  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Sutterella|s__Sutterella_wadsworthensis|t__GCF_000411515  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Sutterella|s__Sutterella_wadsworthensis|t__Sutterella_wadsworthensis_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_flavescens  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_flavescens|t__Neisseria_flavescens_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_unclassified  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Bilophila  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Bilophila|s__Bilophila_unclassified  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Bilophila|s__Bilophila_wadsworthia  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Bilophila|s__Bilophila_wadsworthia|t__GCF_000185705  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Desulfovibrio  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Desulfovibrio|s__Desulfovibrio_desulfuricans  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Desulfovibrio|s__Desulfovibrio_desulfuricans|t__Desulfovibrio_desulfuricans_unclassified  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Desulfovibrio|s__Desulfovibrio_piger  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Desulfovibrio|s__Desulfovibrio_piger|t__GCF_000156375  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_jejuni  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_jejuni|t__Campylobacter_jejuni_unclassified  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_pylori  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_pylori|t__Helicobacter_pylori_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas|s__Aeromonas_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Succinivibrionaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Succinivibrionaceae|g__Succinivibrionaceae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Citrobacter  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Citrobacter|s__Citrobacter_freundii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Citrobacter|s__Citrobacter_freundii|t__Citrobacter_freundii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Citrobacter|s__Citrobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_aerogenes  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_aerogenes|t__Enterobacter_aerogenes_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_cloacae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_cloacae|t__Enterobacter_cloacae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_coli  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_coli|t__Escherichia_coli_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Klebsiella  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_pneumoniae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_pneumoniae|t__Klebsiella_pneumoniae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Providencia  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Providencia|s__Providencia_alcalifaciens  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Providencia|s__Providencia_alcalifaciens|t__Providencia_alcalifaciens_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter|s__Aggregatibacter_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_parainfluenzae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_parainfluenzae|t__Haemophilus_parainfluenzae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_pittmaniae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_pittmaniae|t__GCF_000223275  k__Bacteria|p__Spirochaetes  k__Bacteria|p__Spirochaetes|c__Spirochaetia  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Brachyspiraceae  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Brachyspiraceae|g__Brachyspira  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Brachyspiraceae|g__Brachyspira|s__Brachyspira_pilosicoli  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Brachyspiraceae|g__Brachyspira|s__Brachyspira_pilosicoli|t__Brachyspira_pilosicoli_unclassified  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Brachyspiraceae|g__Brachyspira|s__Brachyspira_unclassified  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_succinifaciens  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_succinifaciens|t__GCF_000195275  k__Bacteria|p__Tenericutes  k__Bacteria|p__Tenericutes|c__Mollicutes  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Mycoplasma  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Mycoplasma|s__Mycoplasma_hominis  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Mycoplasma|s__Mycoplasma_hominis|t__Mycoplasma_hominis_unclassified  k__Bacteria|p__Verrucomicrobia  k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae  k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales  k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales|f__Verrucomicrobiaceae  k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales|f__Verrucomicrobiaceae|g__Akkermansia  k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales|f__Verrucomicrobiaceae|g__Akkermansia|s__Akkermansia_muciniphila  k__Bacteria|p__Verrucomicrobia|c__Verrucomicrobiae|o__Verrucomicrobiales|f__Verrucomicrobiaceae|g__Akkermansia|s__Akkermansia_muciniphila|t__GCF_000020225  k__Eukaryota  k__Eukaryota|p__Eukaryota_noname  k__Eukaryota|p__Eukaryota_noname|c__Eukaryota_noname  k__Eukaryota|p__Eukaryota_noname|c__Eukaryota_noname|o__Eukaryota_noname  k__Eukaryota|p__Eukaryota_noname|c__Eukaryota_noname|o__Eukaryota_noname|f__Eukaryota_noname  k__Eukaryota|p__Eukaryota_noname|c__Eukaryota_noname|o__Eukaryota_noname|f__Eukaryota_noname|g__Entamoeba  k__Eukaryota|p__Eukaryota_noname|c__Eukaryota_noname|o__Eukaryota_noname|f__Eukaryota_noname|g__Entamoeba|s__Entamoeba_dispar  k__Eukaryota|p__Eukaryota_noname|c__Eukaryota_noname|o__Eukaryota_noname|f__Eukaryota_noname|g__Entamoeba|s__Entamoeba_dispar|t__GCA_000209125  k__Eukaryota|p__Microsporidia  k__Eukaryota|p__Microsporidia|c__Microsporidia_noname  k__Eukaryota|p__Microsporidia|c__Microsporidia_noname|o__Microsporidia_noname  k__Eukaryota|p__Microsporidia|c__Microsporidia_noname|o__Microsporidia_noname|f__Enterocytozoonidae  k__Eukaryota|p__Microsporidia|c__Microsporidia_noname|o__Microsporidia_noname|f__Enterocytozoonidae|g__Enterocytozoon  k__Eukaryota|p__Microsporidia|c__Microsporidia_noname|o__Microsporidia_noname|f__Enterocytozoonidae|g__Enterocytozoon|s__Enterocytozoon_bieneusi  k__Eukaryota|p__Microsporidia|c__Microsporidia_noname|o__Microsporidia_noname|f__Enterocytozoonidae|g__Enterocytozoon|s__Enterocytozoon_bieneusi|t__GCA_000209485  k__Archaea|p__Euryarchaeota|c__Archaeoglobi  k__Archaea|p__Euryarchaeota|c__Archaeoglobi|o__Archaeoglobales  k__Archaea|p__Euryarchaeota|c__Archaeoglobi|o__Archaeoglobales|f__Archaeoglobaceae  k__Archaea|p__Euryarchaeota|c__Archaeoglobi|o__Archaeoglobales|f__Archaeoglobaceae|g__Archaeoglobaceae_unclassified  k__Archaea|p__Euryarchaeota|c__Methanococci  k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales  k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales|f__Methanocaldococcaceae  k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales|f__Methanocaldococcaceae|g__Methanocaldococcaceae_unclassified  k__Bacteria|p__Acidobacteria|c__Acidobacteriia|o__Acidobacteriales|f__Acidobacteriaceae|g__Granulicella  k__Bacteria|p__Acidobacteria|c__Acidobacteriia|o__Acidobacteriales|f__Acidobacteriaceae|g__Granulicella|s__Granulicella_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetales_noname  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetales_noname|g__Tropheryma  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetales_noname|g__Tropheryma|s__Tropheryma_whipplei  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetales_noname|g__Tropheryma|s__Tropheryma_whipplei|t__Tropheryma_whipplei_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Brevibacteriaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Brevibacteriaceae|g__Brevibacterium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Brevibacteriaceae|g__Brevibacterium|s__Brevibacterium_linens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Brevibacteriaceae|g__Brevibacterium|s__Brevibacterium_linens|t__GCF_000167575  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Brevibacteriaceae|g__Brevibacterium|s__Brevibacterium_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_crenatum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_crenatum|t__GCF_000380545  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermatophilaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermatophilaceae|g__Dermatophilaceae_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Rothia|s__Rothia_dentocariosa  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Rothia|s__Rothia_dentocariosa|t__Rothia_dentocariosa_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacteriaceae_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_freudenreichii  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_freudenreichii|t__GCF_000091725  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Alloscardovia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Alloscardovia|s__Alloscardovia_omnicolens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Alloscardovia|s__Alloscardovia_omnicolens|t__Alloscardovia_omnicolens_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_animalis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_animalis|t__Bifidobacterium_animalis_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_breve  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_breve|t__Bifidobacterium_breve_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_dentium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_dentium|t__Bifidobacterium_dentium_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_longum|t__GCF_000497735  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Parascardovia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Parascardovia|s__Parascardovia_denticolens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Parascardovia|s__Parascardovia_denticolens|t__Parascardovia_denticolens_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Scardovia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Scardovia|s__Scardovia_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Scardovia|s__Scardovia_wiggsiae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Scardovia|s__Scardovia_wiggsiae|t__Scardovia_wiggsiae_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_vaginae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_vaginae|t__Atopobium_vaginae_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_intestinalis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_intestinalis|t__GCF_000156175  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_stercoris  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_stercoris|t__GCF_000156215  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_tanakaei  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_tanakaei|t__GCF_000225705  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Eggerthella|s__Eggerthella_sp_1_3_56FAA  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Eggerthella|s__Eggerthella_sp_1_3_56FAA|t__GCF_000185625  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Enterorhabdus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Enterorhabdus|s__Enterorhabdus_caecimuris  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Enterorhabdus|s__Enterorhabdus_caecimuris|t__GCF_000403355  k__Bacteria|p__Aquificae  k__Bacteria|p__Aquificae|c__Aquificae  k__Bacteria|p__Aquificae|c__Aquificae|o__Aquificales  k__Bacteria|p__Aquificae|c__Aquificae|o__Aquificales|f__Desulfurobacteriaceae  k__Bacteria|p__Aquificae|c__Aquificae|o__Aquificales|f__Desulfurobacteriaceae|g__Desulfurobacteriaceae_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_cellulosilyticus|t__GCF_000158035  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_eggerthii|t__GCF_000155815  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_finegoldii|t__GCF_000156195  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_fluxus  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_fluxus|t__GCF_000195635  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_fragilis|t__GCF_000025985 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k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_salanitronis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_salanitronis|t__GCF_000190575  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_salyersiae|t__GCF_000273235  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_1_1_14  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_1_1_14|t__GCF_000162515  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_1_1_30  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_1_1_30|t__GCF_000218365  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_1_1_6  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_1_1_6|t__GCF_000159875  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_2_1_22  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_2_1_22|t__GCF_000162155  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_2_1_56FAA  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_2_1_56FAA|t__GCF_000218345  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_3_1_19  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_3_1_19|t__GCF_000163655  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_3_1_23  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_3_1_23|t__GCF_000162555  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_3_2_5  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_3_2_5|t__GCF_000159855  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_9_1_42FAA  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_9_1_42FAA|t__GCF_000157075  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_thetaiotaomicron|t__GCF_000011065  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_xylanisolvens|t__GCF_000210075  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Marinilabiliaceae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Marinilabiliaceae|g__Marinilabiliaceae_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Butyricimonas  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Butyricimonas|s__Butyricimonas_synergistica  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Butyricimonas|s__Butyricimonas_synergistica|t__GCF_000379665  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Dysgonomonas  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Dysgonomonas|s__Dysgonomonas_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Odoribacter|s__Odoribacter_laneus  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Odoribacter|s__Odoribacter_laneus|t__GCF_000243215  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_johnsonii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_johnsonii|t__Parabacteroides_johnsonii_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_merdae|t__GCF_000307345  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_sp_D13  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_sp_D13|t__GCF_000162275  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_buccae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_buccae|t__Prevotella_buccae_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_buccalis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_buccalis|t__GCF_000177075  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_intermedia  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_intermedia|t__GCF_000261025  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_melaninogenica  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_melaninogenica|t__Prevotella_melaninogenica_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_multisaccharivorax  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_multisaccharivorax|t__GCF_000218235  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_oralis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_oralis|t__Prevotella_oralis_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_sp_HGB5  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Rikenellaceae|g__Alistipes|s__Alistipes_sp_HGB5|t__GCF_000183485  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_unclassified  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Cellulophaga  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Cellulophaga|s__Cellulophaga_unclassified  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Riemerella  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Riemerella|s__Riemerella_unclassified  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriaceae  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Pedobacter  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Pedobacter|s__Pedobacter_unclassified  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Sphingobacterium  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Sphingobacterium|s__Sphingobacterium_unclassified  k__Bacteria|p__Candidatus_Saccharibacteria  k__Bacteria|p__Candidatus_Saccharibacteria|c__Candidatus_Saccharibacteria_noname  k__Bacteria|p__Candidatus_Saccharibacteria|c__Candidatus_Saccharibacteria_noname|o__Candidatus_Saccharibacteria_noname  k__Bacteria|p__Candidatus_Saccharibacteria|c__Candidatus_Saccharibacteria_noname|o__Candidatus_Saccharibacteria_noname|f__Candidatus_Saccharibacteria_noname  k__Bacteria|p__Candidatus_Saccharibacteria|c__Candidatus_Saccharibacteria_noname|o__Candidatus_Saccharibacteria_noname|f__Candidatus_Saccharibacteria_noname|g__Candidatus_Saccharibacteria_noname  k__Bacteria|p__Candidatus_Saccharibacteria|c__Candidatus_Saccharibacteria_noname|o__Candidatus_Saccharibacteria_noname|f__Candidatus_Saccharibacteria_noname|g__Candidatus_Saccharibacteria_noname_unclassified  k__Bacteria|p__Candidatus_Saccharibacteria|c__Candidatus_Saccharibacteria_noname|o__Candidatus_Saccharibacteria_noname|f__Candidatus_Saccharibacteria_noname|g__Candidatus_Saccharibacteria_noname|s__candidate_division_TM7_single_cell_isolate_TM7b  k__Bacteria|p__Candidatus_Saccharibacteria|c__Candidatus_Saccharibacteria_noname|o__Candidatus_Saccharibacteria_noname|f__Candidatus_Saccharibacteria_noname|g__Candidatus_Saccharibacteria_noname|s__candidate_division_TM7_single_cell_isolate_TM7b|t__GCF_000170655  k__Bacteria|p__Candidatus_Saccharibacteria|c__Candidatus_Saccharibacteria_noname|o__Candidatus_Saccharibacteria_noname|f__Candidatus_Saccharibacteria_noname|g__Candidatus_Saccharibacteria_noname|s__candidate_division_TM7_single_cell_isolate_TM7c  k__Bacteria|p__Candidatus_Saccharibacteria|c__Candidatus_Saccharibacteria_noname|o__Candidatus_Saccharibacteria_noname|f__Candidatus_Saccharibacteria_noname|g__Candidatus_Saccharibacteria_noname|s__candidate_division_TM7_single_cell_isolate_TM7c|t__GCF_000170675  k__Bacteria|p__Chlamydiae  k__Bacteria|p__Chlamydiae|c__Chlamydiia  k__Bacteria|p__Chlamydiae|c__Chlamydiia|o__Chlamydiales  k__Bacteria|p__Chlamydiae|c__Chlamydiia|o__Chlamydiales|f__Chlamydiaceae  k__Bacteria|p__Chlamydiae|c__Chlamydiia|o__Chlamydiales|f__Chlamydiaceae|g__Chlamydophila  k__Bacteria|p__Chlamydiae|c__Chlamydiia|o__Chlamydiales|f__Chlamydiaceae|g__Chlamydophila|s__Chlamydophila_unclassified  k__Bacteria|p__Chlorobi  k__Bacteria|p__Chlorobi|c__Chlorobia  k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales  k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales|f__Chlorobiaceae  k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales|f__Chlorobiaceae|g__Chlorobium  k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales|f__Chlorobiaceae|g__Chlorobium|s__Chlorobium_phaeobacteroides  k__Bacteria|p__Chlorobi|c__Chlorobia|o__Chlorobiales|f__Chlorobiaceae|g__Chlorobium|s__Chlorobium_phaeobacteroides|t__Chlorobium_phaeobacteroides_unclassified  k__Bacteria|p__Deferribacteres  k__Bacteria|p__Deferribacteres|c__Deferribacteres  k__Bacteria|p__Deferribacteres|c__Deferribacteres|o__Deferribacterales  k__Bacteria|p__Deferribacteres|c__Deferribacteres|o__Deferribacterales|f__Deferribacteraceae  k__Bacteria|p__Deferribacteres|c__Deferribacteres|o__Deferribacterales|f__Deferribacteraceae|g__Mucispirillum  k__Bacteria|p__Deferribacteres|c__Deferribacteres|o__Deferribacterales|f__Deferribacteraceae|g__Mucispirillum|s__Mucispirillum_schaedleri  k__Bacteria|p__Deferribacteres|c__Deferribacteres|o__Deferribacterales|f__Deferribacteraceae|g__Mucispirillum|s__Mucispirillum_schaedleri|t__GCF_000487995  k__Bacteria|p__Deinococcus_Thermus  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_unclassified  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Thermales  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Thermales|f__Thermaceae  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Thermales|f__Thermaceae|g__Thermus  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Thermales|f__Thermaceae|g__Thermus|s__Thermus_scotoductus  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Thermales|f__Thermaceae|g__Thermus|s__Thermus_scotoductus|t__Thermus_scotoductus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Alicyclobacillaceae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Alicyclobacillaceae|g__Alicyclobacillus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Alicyclobacillaceae|g__Alicyclobacillus|s__Alicyclobacillus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella|s__Gemella_haemolysans  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella|s__Gemella_haemolysans|t__Gemella_haemolysans_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella|s__Gemella_morbillorum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella|s__Gemella_morbillorum|t__GCF_000185645  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella|s__Gemella_sanguinis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella|s__Gemella_sanguinis|t__GCF_000204335  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella|s__Gemella_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus  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k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_casseliflavus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_casseliflavus|t__Enterococcus_casseliflavus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_durans  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_durans|t__Enterococcus_durans_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_faecalis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_faecalis|t__Enterococcus_faecalis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_hirae  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k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_crispatus|t__Lactobacillus_crispatus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_curvatus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_curvatus|t__GCF_000235705  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_fructivorans  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_fructivorans|t__GCF_000185465  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_gasseri  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_gasseri|t__Lactobacillus_gasseri_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_gastricus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_gastricus|t__GCF_000247775  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_plantarum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_plantarum|t__Lactobacillus_plantarum_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_reuteri  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_reuteri|t__Lactobacillus_reuteri_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_rhamnosus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_rhamnosus|t__Lactobacillus_rhamnosus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_salivarius  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_salivarius|t__Lactobacillus_salivarius_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_sanfranciscensis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_sanfranciscensis|t__GCF_000225325  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_versmoldensis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_versmoldensis|t__GCF_000260455  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Pediococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Pediococcus|s__Pediococcus_pentosaceus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Pediococcus|s__Pediococcus_pentosaceus|t__Pediococcus_pentosaceus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Pediococcus|s__Pediococcus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_citreum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_citreum|t__Leuconostoc_citreum_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_kimchii  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_kimchii|t__GCF_000092505  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_mesenteroides  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_mesenteroides|t__Leuconostoc_mesenteroides_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Weissella|s__Weissella_cibaria  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Weissella|s__Weissella_cibaria|t__GCF_000193635  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Weissella|s__Weissella_confusa  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Weissella|s__Weissella_confusa|t__GCF_000239955  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Lactococcus|s__Lactococcus_garvieae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Lactococcus|s__Lactococcus_garvieae|t__Lactococcus_garvieae_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Lactococcus|s__Lactococcus_raffinolactis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Lactococcus|s__Lactococcus_raffinolactis|t__GCF_000327305  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_agalactiae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_agalactiae|t__Streptococcus_agalactiae_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_constellatus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_constellatus|t__Streptococcus_constellatus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_cristatus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_cristatus|t__Streptococcus_cristatus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_gallolyticus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_gallolyticus|t__Streptococcus_gallolyticus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_mutans  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_mutans|t__Streptococcus_mutans_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_oligofermentans  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_oligofermentans|t__GCF_000385925  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sanguinis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sanguinis|t__Streptococcus_sanguinis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sobrinus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sobrinus|t__Streptococcus_sobrinus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_tigurinus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_tigurinus|t__Streptococcus_tigurinus_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Butyricicoccus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Butyricicoccus|s__Butyricicoccus_pullicaecorum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Butyricicoccus|s__Butyricicoccus_pullicaecorum|t__GCF_000398925  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridiaceae_noname  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridiaceae_noname|s__Clostridiaceae_bacterium_JC118  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k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_clostridioforme|t__GCF_000371525  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_hathewayi|t__GCF_000160095  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_hathewayi|t__GCF_000371445  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_saccharolyticum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_saccharolyticum|t__GCF_000210535  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_scindens  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_scindens|t__GCF_000154505  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_ATCC_BAA_442  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_ATCC_BAA_442|t__GCF_000466445  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_D5  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_D5|t__GCF_000190355  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_KLE_1755  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_KLE_1755|t__GCF_000466465  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_M62_1  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_M62_1|t__GCF_000159055 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k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Clostridiales_Family_XI_Incertae_Sedis_noname  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Clostridiales_Family_XI_Incertae_Sedis_noname|s__Clostridiales_bacterium_BV3C26  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Clostridiales_Family_XI_Incertae_Sedis_noname|s__Clostridiales_bacterium_BV3C26|t__GCF_000478985  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Finegoldia  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Finegoldia|s__Finegoldia_magna  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Finegoldia|s__Finegoldia_magna|t__Finegoldia_magna_unclassified  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k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_limosum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_limosum|t__GCF_000152245  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_rectale|t__GCF_000020605  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_saphenum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_saphenum|t__GCF_000161975  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_siraeum|t__GCF_000209915  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_sp_3_1_31  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_sp_3_1_31|t__Eubacterium_sp_3_1_31_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Anaerostipes|s__Anaerostipes_caccae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Anaerostipes|s__Anaerostipes_caccae|t__GCF_000154305  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Anaerostipes|s__Anaerostipes_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Blautia_hansenii  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Blautia_hansenii|t__GCF_000156675  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Blautia_producta  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Blautia_producta|t__GCF_000373885  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Ruminococcus_obeum|t__GCF_000153905  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Ruminococcus_obeum|t__GCF_000210015  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Ruminococcus_torques|t__GCF_000210035  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Dorea|s__Dorea_formicigenerans|t__GCF_000225745  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnoanaerobaculum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnoanaerobaculum|s__Lachnoanaerobaculum_saburreum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnoanaerobaculum|s__Lachnoanaerobaculum_saburreum|t__Lachnoanaerobaculum_saburreum_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_5_1_57FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_5_1_57FAA|t__GCF_000218425  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_6_1_63FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_6_1_63FAA|t__GCF_000209425  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_ICM7  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_ICM7|t__GCF_000287675  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_oral_taxon_082  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_oral_taxon_082|t__GCF_000242315  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Marvinbryantia  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Marvinbryantia|s__Marvinbryantia_formatexigens  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Marvinbryantia|s__Marvinbryantia_formatexigens|t__GCF_000173815  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Oribacterium  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Oribacterium|s__Oribacterium_sinus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Oribacterium|s__Oribacterium_sinus|t__GCF_000160635  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Roseburia|s__Roseburia_intestinalis|t__GCF_000209995  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Stomatobaculum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Stomatobaculum|s__Stomatobaculum_longum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Stomatobaculum|s__Stomatobaculum_longum|t__GCF_000242235  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Oscillospiraceae|g__Oscillibacter|s__Oscillibacter_sp_KLE_1728  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Oscillospiraceae|g__Oscillibacter|s__Oscillibacter_sp_KLE_1728|t__GCF_000469425  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Oscillospiraceae|g__Oscillibacter|s__Oscillibacter_sp_KLE_1745  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Oscillospiraceae|g__Oscillibacter|s__Oscillibacter_sp_KLE_1745|t__GCF_000469445  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Oscillospiraceae|g__Oscillibacter|s__Oscillibacter_valericigenes  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Oscillospiraceae|g__Oscillibacter|s__Oscillibacter_valericigenes|t__GCF_000283575  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Clostridium_glycolicum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Clostridium_glycolicum|t__GCF_000373865  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcus|s__Peptostreptococcus_stomatis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcus|s__Peptostreptococcus_stomatis|t__GCF_000147675  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000210735  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_lactaris|t__GCF_000155205  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_lactaris|t__GCF_000507785  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_sp  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_sp_JC304  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_sp_JC304|t__GCF_000285855  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Ruminococcus|s__Ruminococcus_sp|t__GCF_000209835  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Subdoligranulum|s__Subdoligranulum_sp_4_3_54A2FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Subdoligranulum|s__Subdoligranulum_sp_4_3_54A2FAA|t__GCF_000238635  k__Bacteria|p__Firmicutes|c__Clostridia|o__Halanaerobiales  k__Bacteria|p__Firmicutes|c__Clostridia|o__Halanaerobiales|f__Halobacteroidaceae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Halanaerobiales|f__Halobacteroidaceae|g__Halobacteroidaceae_unclassified  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Allobaculum  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Allobaculum|s__Allobaculum_stercoricanis  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Allobaculum|s__Allobaculum_stercoricanis|t__GCF_000384195  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Bulleidia  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Bulleidia|s__Bulleidia_extructa  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Bulleidia|s__Bulleidia_extructa|t__GCF_000177375  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Coprobacillus|s__Coprobacillus_unclassified  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Eggerthia  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Eggerthia|s__Eggerthia_catenaformis  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Eggerthia|s__Eggerthia_catenaformis|t__GCF_000340375  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Clostridium_ramosum  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Clostridium_ramosum|t__GCF_000154485  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Clostridium_spiroforme  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Clostridium_spiroforme|t__GCF_000154805  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Erysipelotrichaceae_bacterium_21_3  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Erysipelotrichaceae_bacterium_21_3|t__GCF_000242195  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Erysipelotrichaceae_bacterium_3_1_53  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Erysipelotrichaceae_bacterium_3_1_53|t__GCF_000165065  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Erysipelotrichaceae_bacterium_5_2_54FAA  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Erysipelotrichaceae_bacterium_5_2_54FAA|t__GCF_000163515  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Eubacterium_dolichum  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Erysipelotrichaceae_noname|s__Eubacterium_dolichum|t__GCF_000154285  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Holdemania|s__Holdemania_sp_AP2  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Holdemania|s__Holdemania_sp_AP2|t__GCF_000327285  k__Bacteria|p__Firmicutes|c__Erysipelotrichia|o__Erysipelotrichales|f__Erysipelotrichaceae|g__Holdemania|s__Holdemania_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus|s__Acidaminococcus_sp_BV3L6  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus|s__Acidaminococcus_sp_BV3L6|t__GCF_000468835  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Anaeroglobus  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Anaeroglobus|s__Anaeroglobus_geminatus  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Anaeroglobus|s__Anaeroglobus_geminatus|t__GCF_000239275  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megamonas  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megamonas|s__Megamonas_funiformis  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megamonas|s__Megamonas_funiformis|t__GCF_000245775  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megamonas|s__Megamonas_hypermegale  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megamonas|s__Megamonas_hypermegale|t__GCF_000209975  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megamonas|s__Megamonas_rupellensis  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megamonas|s__Megamonas_rupellensis|t__GCF_000378365  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megamonas|s__Megamonas_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_elsdenii  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_elsdenii|t__GCF_000283495  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_micronuciformis  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_micronuciformis|t__GCF_000165735  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_bovis  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_bovis|t__GCF_000381005  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_3_1_44  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_3_1_44|t__GCF_000163715  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_6_1_27  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_6_1_27|t__GCF_000163735  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_mortiferum  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_mortiferum|t__GCF_000158195  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_periodonticum  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_periodonticum|t__Fusobacterium_periodonticum_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales|f__Caulobacteraceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales|f__Caulobacteraceae|g__Asticcacaulis  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales|f__Caulobacteraceae|g__Asticcacaulis|s__Asticcacaulis_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales|f__Caulobacteraceae|g__Caulobacter  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales|f__Caulobacteraceae|g__Caulobacter|s__Caulobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bartonellaceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bartonellaceae|g__Bartonella  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bartonellaceae|g__Bartonella|s__Bartonella_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Bordetella  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Bordetella|s__Bordetella_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Burkholderia  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Burkholderia|s__Burkholderia_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Cupriavidus  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Cupriavidus|s__Cupriavidus_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Lautropia  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Lautropia|s__Lautropia_mirabilis  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Lautropia|s__Lautropia_mirabilis|t__GCF_000186425  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Comamonas  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Comamonas|s__Comamonas_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Candidatus_Zinderia  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Candidatus_Zinderia|s__Candidatus_Zinderia_insecticola  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Candidatus_Zinderia|s__Candidatus_Zinderia_insecticola|t__GCF_000147015  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Oxalobacter|s__Oxalobacter_formigenes|t__GCF_000158475  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Sutterella|s__Sutterella_wadsworthensis|t__GCF_000186505  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Sutterella|s__Sutterella_wadsworthensis|t__GCF_000297775  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Gallionellales  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Gallionellales|f__Gallionellaceae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Gallionellales|f__Gallionellaceae|g__Gallionellaceae_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Chromobacterium  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Chromobacterium|s__Chromobacterium_unclassified  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Desulfovibrio|s__Desulfovibrio_desulfuricans|t__GCF_000420465  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Desulfovibrio|s__Desulfovibrio_termitidis  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Desulfovibrio|s__Desulfovibrio_termitidis|t__GCF_000504305  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Arcobacter  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Arcobacter|s__Arcobacter_butzleri  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Arcobacter|s__Arcobacter_butzleri|t__Arcobacter_butzleri_unclassified  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Arcobacter|s__Arcobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_concisus  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_concisus|t__GCF_000017725  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_hominis  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_hominis|t__GCF_000017585  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Succinivibrionaceae|g__Succinatimonas  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Succinivibrionaceae|g__Succinatimonas|s__Succinatimonas_hippei  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Succinivibrionaceae|g__Succinatimonas|s__Succinatimonas_hippei|t__GCF_000188195  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Pseudoalteromonadaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Pseudoalteromonadaceae|g__Pseudoalteromonadaceae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Chromatiales  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Chromatiales|f__Ectothiorhodospiraceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Chromatiales|f__Ectothiorhodospiraceae|g__Spiribacter  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Chromatiales|f__Ectothiorhodospiraceae|g__Spiribacter|s__Spiribacter_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Citrobacter|s__Citrobacter_koseri  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Citrobacter|s__Citrobacter_koseri|t__GCF_000018045  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacteriaceae_noname  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacteriaceae_noname|s__Enterobacteriaceae_bacterium_9_2_54FAA  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacteriaceae_noname|s__Enterobacteriaceae_bacterium_9_2_54FAA|t__GCF_000185685  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_cancerogenus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_cancerogenus|t__GCF_000155995  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_hormaechei  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_hormaechei|t__Enterobacter_hormaechei_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_mori  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_mori|t__GCF_000211415  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Hafnia  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Hafnia|s__Hafnia_alvei  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Hafnia|s__Hafnia_alvei|t__GCF_000239255  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_oxytoca  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_oxytoca|t__Klebsiella_oxytoca_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pantoea  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pantoea|s__Pantoea_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Proteus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Proteus|s__Proteus_mirabilis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Proteus|s__Proteus_mirabilis|t__Proteus_mirabilis_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Proteus|s__Proteus_penneri  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Proteus|s__Proteus_penneri|t__GCF_000155835  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Proteus|s__Proteus_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Providencia|s__Providencia_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Raoultella  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Raoultella|s__Raoultella_ornithinolytica  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Raoultella|s__Raoultella_ornithinolytica|t__GCF_000367425  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Shigella  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Shigella|s__Shigella_flexneri  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Shigella|s__Shigella_flexneri|t__Shigella_flexneri_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sonnei  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Shigella|s__Shigella_sonnei|t__Shigella_sonnei_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Yersinia  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Yersinia|s__Yersinia_pestis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Yersinia|s__Yersinia_pestis|t__Yersinia_pestis_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Yersinia|s__Yersinia_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Oceanospirillales  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Oceanospirillales|f__Hahellaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Oceanospirillales|f__Hahellaceae|g__Hahellaceae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Oceanospirillales|f__Halomonadaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Oceanospirillales|f__Halomonadaceae|g__Halomonas  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Oceanospirillales|f__Halomonadaceae|g__Halomonas|s__Halomonas_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Actinobacillus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Actinobacillus|s__Actinobacillus_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter|s__Aggregatibacter_aphrophilus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter|s__Aggregatibacter_aphrophilus|t__Aggregatibacter_aphrophilus_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter|s__Aggregatibacter_segnis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter|s__Aggregatibacter_segnis|t__GCF_000185305  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_haemolyticus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_haemolyticus|t__GCF_000262285  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_influenzae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_influenzae|t__Haemophilus_influenzae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_parahaemolyticus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_parahaemolyticus|t__GCF_000262265  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_paraphrohaemolyticus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_paraphrohaemolyticus|t__GCF_000260675  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_sputorum  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_sputorum|t__Haemophilus_sputorum_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Pasteurella  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Pasteurella|s__Pasteurella_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_baumannii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_baumannii|t__Acinetobacter_baumannii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_lwoffii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_lwoffii|t__Acinetobacter_lwoffii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_aeruginosa  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_aeruginosa|t__Pseudomonas_aeruginosa_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Sinobacteraceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Sinobacteraceae|g__Sinobacteraceae_unclassified  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Sphaerochaeta  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Sphaerochaeta|s__Sphaerochaeta_unclassified  k__Bacteria|p__Synergistetes  k__Bacteria|p__Synergistetes|c__Synergistia  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Pyramidobacter  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Pyramidobacter|s__Pyramidobacter_piscolens  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Pyramidobacter|s__Pyramidobacter_piscolens|t__GCF_000177335  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Synergistes  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Synergistes|s__Synergistes_sp_3_1_syn1  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Synergistes|s__Synergistes_sp_3_1_syn1|t__GCF_000238615  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Acholeplasmatales  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Acholeplasmatales|f__Acholeplasmataceae  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Acholeplasmatales|f__Acholeplasmataceae|g__Candidatus_Phytoplasma  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Acholeplasmatales|f__Acholeplasmataceae|g__Candidatus_Phytoplasma|s__Candidatus_Phytoplasma_unclassified  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Entomoplasmatales  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Entomoplasmatales|f__Spiroplasmataceae  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Entomoplasmatales|f__Spiroplasmataceae|g__Spiroplasma  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Entomoplasmatales|f__Spiroplasmataceae|g__Spiroplasma|s__Spiroplasma_unclassified  k__Eukaryota|p__Ascomycota  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Eurotiales  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Eurotiales|f__Aspergillaceae  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Eurotiales|f__Aspergillaceae|g__Aspergillaceae_unclassified  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Eurotiales|f__Aspergillaceae|g__Penicillium  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Eurotiales|f__Aspergillaceae|g__Penicillium|s__Penicillium_chrysogenum  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Eurotiales|f__Aspergillaceae|g__Penicillium|s__Penicillium_chrysogenum|t__GCA_000226395  k__Eukaryota|p__Ascomycota|c__Saccharomycetes  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Naumovozyma  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Naumovozyma|s__Naumovozyma_unclassified  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Saccharomyces  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Saccharomyces|s__Saccharomyces_cerevisiae  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Saccharomyces|s__Saccharomyces_cerevisiae|t__GCA_000146045  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Saccharomycetaceae_unclassified  k__Eukaryota|p__Ascomycota|c__Schizosaccharomycetes  k__Eukaryota|p__Ascomycota|c__Schizosaccharomycetes|o__Schizosaccharomycetales  k__Eukaryota|p__Ascomycota|c__Schizosaccharomycetes|o__Schizosaccharomycetales|f__Schizosaccharomycetaceae  k__Eukaryota|p__Ascomycota|c__Schizosaccharomycetes|o__Schizosaccharomycetales|f__Schizosaccharomycetaceae|g__Schizosaccharomyces  k__Eukaryota|p__Ascomycota|c__Schizosaccharomycetes|o__Schizosaccharomycetales|f__Schizosaccharomycetaceae|g__Schizosaccharomyces|s__Schizosaccharomyces_pombe  k__Eukaryota|p__Ascomycota|c__Schizosaccharomycetes|o__Schizosaccharomycetales|f__Schizosaccharomycetaceae|g__Schizosaccharomyces|s__Schizosaccharomyces_pombe|t__GCA_000002945  k__Eukaryota|p__Ascomycota|c__Schizosaccharomycetes|o__Schizosaccharomycetales|f__Schizosaccharomycetaceae|g__Schizosaccharomyces|s__Schizosaccharomyces_unclassified  k__Eukaryota|p__Eukaryota_noname|c__Eukaryota_noname|o__Eukaryota_noname|f__Hexamitidae  k__Eukaryota|p__Eukaryota_noname|c__Eukaryota_noname|o__Eukaryota_noname|f__Hexamitidae|g__Giardia  k__Eukaryota|p__Eukaryota_noname|c__Eukaryota_noname|o__Eukaryota_noname|f__Hexamitidae|g__Giardia|s__Giardia_intestinalis  k__Eukaryota|p__Eukaryota_noname|c__Eukaryota_noname|o__Eukaryota_noname|f__Hexamitidae|g__Giardia|s__Giardia_intestinalis|t__GCA_000002435  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_europaeus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_europaeus|t__GCF_000411155  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_neuii  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_neuii|t__GCF_000296485  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_ICM39  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_ICM39|t__GCF_000282935  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_urogenitalis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_urogenitalis|t__GCF_000159035  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Mobiluncus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Mobiluncus|s__Mobiluncus_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Brevibacteriaceae|g__Brevibacterium|s__Brevibacterium_massiliense  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Brevibacteriaceae|g__Brevibacterium|s__Brevibacterium_massiliense|t__GCF_000285915  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_accolens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_accolens|t__Corynebacterium_accolens_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_amycolatum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_amycolatum|t__GCF_000173655  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_aurimucosum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_aurimucosum|t__Corynebacterium_aurimucosum_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_jeikeium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_jeikeium|t__Corynebacterium_jeikeium_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_kroppenstedtii  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_kroppenstedtii|t__GCF_000023145  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_propinquum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_propinquum|t__GCF_000375525  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_pseudodiphtheriticum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_pseudodiphtheriticum|t__GCF_000466825  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_pseudogenitalium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_pseudogenitalium|t__GCF_000156615  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_pyruviciproducens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_pyruviciproducens|t__GCF_000411375  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_striatum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_striatum|t__GCF_000159135  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_tuberculostearicum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_tuberculostearicum|t__GCF_000175635  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Dermabacter  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Dermabacter|s__Dermabacter_sp_HFH0086  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Dermabacter|s__Dermabacter_sp_HFH0086|t__GCF_000413375  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Micrococcus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Micrococcus|s__Micrococcus_luteus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Micrococcus|s__Micrococcus_luteus|t__Micrococcus_luteus_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_acnes  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_acnes|t__Propionibacterium_acnes_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_avidum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_avidum|t__Propionibacterium_avidum_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_granulosum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_granulosum|t__Propionibacterium_granulosum_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_minimum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_minimum|t__GCF_000421685  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_pseudolongum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Bifidobacterium|s__Bifidobacterium_pseudolongum|t__GCF_000421365  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_minutum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_minutum|t__GCF_000364325  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Cryptobacterium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Cryptobacterium|s__Cryptobacterium_curtum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Cryptobacterium|s__Cryptobacterium_curtum|t__GCF_000023845  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Eggerthella|s__Eggerthella_sp_HGA1  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Eggerthella|s__Eggerthella_sp_HGA1|t__GCF_000191845  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Olsenella|s__Olsenella_uli  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Olsenella|s__Olsenella_uli|t__GCF_000143845  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Slackia|s__Slackia_exigua  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Slackia|s__Slackia_exigua|t__GCF_000162875  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Slackia|s__Slackia_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Dysgonomonas|s__Dysgonomonas_gadei  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Dysgonomonas|s__Dysgonomonas_gadei|t__GCF_000213555  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Dysgonomonas|s__Dysgonomonas_mossii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Dysgonomonas|s__Dysgonomonas_mossii|t__Dysgonomonas_mossii_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Alloprevotella|s__Alloprevotella_tannerae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Alloprevotella|s__Alloprevotella_tannerae|t__GCF_000159995  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_bergensis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_bergensis|t__GCF_000160535  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_histicola  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_histicola|t__GCF_000234055  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_paludivivens  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_paludivivens|t__GCF_000373185  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_salivae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_salivae|t__GCF_000185845  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_veroralis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_veroralis|t__Prevotella_veroralis_unclassified  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Chryseobacterium  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Chryseobacterium|s__Chryseobacterium_gleum  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Chryseobacterium|s__Chryseobacterium_gleum|t__GCF_000143785  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Chryseobacterium|s__Chryseobacterium_unclassified  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Elizabethkingia  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Elizabethkingia|s__Elizabethkingia_meningoseptica  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Elizabethkingia|s__Elizabethkingia_meningoseptica|t__Elizabethkingia_meningoseptica_unclassified  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Empedobacter  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Empedobacter|s__Empedobacter_brevis  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Empedobacter|s__Empedobacter_brevis|t__GCF_000382425  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Thermales|f__Thermaceae|g__Thermus|s__Thermus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_cereus_thuringiensis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_cereus_thuringiensis|t__Bacillus_cereus_thuringiensis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Paenibacillaceae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Paenibacillaceae|g__Paenibacillus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Paenibacillaceae|g__Paenibacillus|s__Paenibacillus_barengoltzii  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Paenibacillaceae|g__Paenibacillus|s__Paenibacillus_barengoltzii|t__GCF_000403375  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Paenibacillaceae|g__Paenibacillus|s__Paenibacillus_lactis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Paenibacillaceae|g__Paenibacillus|s__Paenibacillus_lactis|t__GCF_000230915  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_caprae_capitis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_caprae_capitis|t__GCF_000160215  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_caprae_capitis|t__Staphylococcus_caprae_capitis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_epidermidis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_epidermidis|t__Staphylococcus_epidermidis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_haemolyticus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_haemolyticus|t__Staphylococcus_haemolyticus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_hominis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_hominis|t__Staphylococcus_hominis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_lugdunensis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_lugdunensis|t__Staphylococcus_lugdunensis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_pseudintermedius  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_pseudintermedius|t__Staphylococcus_pseudintermedius_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_warneri  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_warneri|t__Staphylococcus_warneri_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Facklamia  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Facklamia|s__Facklamia_hominis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Facklamia|s__Facklamia_hominis|t__Facklamia_hominis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Facklamia|s__Facklamia_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Dolosigranulum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Dolosigranulum|s__Dolosigranulum_pigrum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Dolosigranulum|s__Dolosigranulum_pigrum|t__GCF_000245815  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Granulicatella|s__Granulicatella_elegans  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Granulicatella|s__Granulicatella_elegans|t__GCF_000162475  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_asini  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_asini|t__Enterococcus_asini_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_avium  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_avium|t__Enterococcus_avium_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gallinarum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gallinarum|t__GCF_000157255  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_italicus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_italicus|t__GCF_000185365  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_saccharolyticus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_saccharolyticus|t__Enterococcus_saccharolyticus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_sp_7L76  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_sp_7L76|t__GCF_000210115  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_iners  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_iners|t__Lactobacillus_iners_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_oris  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_oris|t__GCF_000180015  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_oris|t__Lactobacillus_oris_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_sp_7_1_47FAA  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_sp_7_1_47FAA|t__GCF_000227195  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_vaginalis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_vaginalis|t__GCF_000159435  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_fallax  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_fallax|t__GCF_000165675  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_canis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_canis|t__GCF_000268305  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_macedonicus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_macedonicus|t__GCF_000283635  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_massiliensis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_massiliensis|t__Streptococcus_massiliensis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_pasteurianus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_pasteurianus|t__GCF_000270165  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_peroris  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_peroris|t__GCF_000187585  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_pseudopneumoniae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_pseudopneumoniae|t__Streptococcus_pseudopneumoniae_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_pyogenes  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_pyogenes|t__Streptococcus_pyogenes_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_C150  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_C150|t__GCF_000187445  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_hylemonae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_hylemonae|t__GCF_000156515  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_7_2_43FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_7_2_43FAA|t__GCF_000158375  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sporogenes  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sporogenes|t__Clostridium_sporogenes_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_hydrogenalis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_hydrogenalis|t__Anaerococcus_hydrogenalis_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_obesiensis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_obesiensis|t__GCF_000311745  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_prevotii|t__GCF_000024105  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_tetradius  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_tetradius|t__GCF_000159095  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_rhinitidis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_rhinitidis|t__GCF_000246925  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_timonensis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_timonensis|t__GCF_000312025  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_siraeum|t__GCF_000210635  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Anaerostipes|s__Anaerostipes_sp_3_2_56FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Anaerostipes|s__Anaerostipes_sp_3_2_56FAA|t__GCF_000185825  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Cellulosilyticum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Cellulosilyticum|s__Cellulosilyticum_lentocellum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Cellulosilyticum|s__Cellulosilyticum_lentocellum|t__GCF_000178835  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_oral_taxon_107  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_oral_taxon_107|t__GCF_000209465  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Shuttleworthia  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Shuttleworthia|s__Shuttleworthia_satelles  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Shuttleworthia|s__Shuttleworthia_satelles|t__GCF_000160115  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Clostridium_difficile  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Clostridium_difficile|t__Clostridium_difficile_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Clostridium_difficile|t__GCF_000450985  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Clostridium_sordellii  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Clostridium_sordellii|t__Clostridium_sordellii_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcus|s__Peptostreptococcus_anaerobius  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcus|s__Peptostreptococcus_anaerobius|t__Peptostreptococcus_anaerobius_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_atypica|t__GCF_000318355  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_ratti  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_ratti|t__GCF_000315505  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_oral_taxon_780  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_oral_taxon_780|t__GCF_000221605  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_ulcerans  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_ulcerans|t__Fusobacterium_ulcerans_unclassified  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia  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k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales|f__Caulobacteraceae|g__Caulobacter|s__Caulobacter_vibrioides  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales|f__Caulobacteraceae|g__Caulobacter|s__Caulobacter_vibrioides|t__Caulobacter_vibrioides_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bradyrhizobiaceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bradyrhizobiaceae|g__Afipia  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bradyrhizobiaceae|g__Afipia|s__Afipia_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bradyrhizobiaceae|g__Rhodopseudomonas  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bradyrhizobiaceae|g__Rhodopseudomonas|s__Rhodopseudomonas_palustris  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bradyrhizobiaceae|g__Rhodopseudomonas|s__Rhodopseudomonas_palustris|t__Rhodopseudomonas_palustris_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bradyrhizobiaceae|g__Rhodopseudomonas|s__Rhodopseudomonas_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Brucella  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Brucellaceae_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Brucella|s__Brucella_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Hyphomicrobiaceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Hyphomicrobiaceae|g__Hyphomicrobiaceae_unclassified  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k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhizobiaceae|g__Agrobacterium|s__Agrobacterium_tumefaciens|t__Agrobacterium_tumefaciens_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhizobiaceae|g__Agrobacterium|s__Agrobacterium_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhizobiaceae|g__Rhizobium  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhizobiaceae|g__Rhizobium|s__Rhizobium_lupini  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhizobiaceae|g__Rhizobium|s__Rhizobium_lupini|t__GCF_000304595  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhodobiaceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhodobiaceae|g__Rhodobiaceae_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Roseomonas  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Roseomonas|s__Roseomonas_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae|g__Sphingomonas  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae|g__Sphingomonas|s__Sphingomonas_echinoides  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae|g__Sphingomonas|s__Sphingomonas_echinoides|t__GCF_000241465  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae|g__Sphingomonas|s__Sphingomonas_melonis  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae|g__Sphingomonas|s__Sphingomonas_melonis|t__Sphingomonas_melonis_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Burkholderia|s__Burkholderia_cenocepacia  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Burkholderia|s__Burkholderia_cenocepacia|t__Burkholderia_cenocepacia_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Cupriavidus|s__Cupriavidus_metallidurans  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Cupriavidus|s__Cupriavidus_metallidurans|t__GCF_000196015  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Ralstonia  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Ralstonia|s__Ralstonia_pickettii  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Ralstonia|s__Ralstonia_pickettii|t__Ralstonia_pickettii_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Ralstonia|s__Ralstonia_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiales_noname|g__Thiomonas  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiales_noname|g__Thiomonas|s__Thiomonas_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Acidovorax  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Acidovorax|s__Acidovorax_ebreus  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Acidovorax|s__Acidovorax_ebreus|t__GCF_000022305  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Alicycliphilus  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Alicycliphilus|s__Alicycliphilus_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Comamonas|s__Comamonas_testosteroni  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Comamonas|s__Comamonas_testosteroni|t__Comamonas_testosteroni_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Curvibacter  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Curvibacter|s__Curvibacter_lanceolatus  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Curvibacter|s__Curvibacter_lanceolatus|t__GCF_000381265  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Delftia  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Delftia|s__Delftia_acidovorans  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Delftia|s__Delftia_acidovorans|t__Delftia_acidovorans_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Delftia|s__Delftia_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Limnohabitans  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Limnohabitans|s__Limnohabitans_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Polaromonas  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Polaromonas|s__Polaromonas_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Variovorax  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Variovorax|s__Variovorax_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Verminephrobacter  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Verminephrobacter|s__Verminephrobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Massilia  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Massilia|s__Massilia_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Eikenella  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Eikenella|s__Eikenella_corrodens  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Eikenella|s__Eikenella_corrodens|t__Eikenella_corrodens_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Kingella  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Kingella|s__Kingella_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_cinerea  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_cinerea|t__GCF_000173895  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_elongata  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_elongata|t__GCF_000176755  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_gonorrhoeae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_gonorrhoeae|t__Neisseria_gonorrhoeae_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_macacae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_macacae|t__GCF_000220865  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_meningitidis  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_meningitidis|t__Neisseria_meningitidis_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_sicca  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_sicca|t__Neisseria_sicca_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_subflava  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_subflava|t__GCF_000173955  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Desulfovibrio|s__Desulfovibrio_desulfuricans|t__GCF_000022125  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_ureolyticus  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_ureolyticus|t__Campylobacter_ureolyticus_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas|s__Aeromonas_caviae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas|s__Aeromonas_caviae|t__GCF_000208825  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas|s__Aeromonas_hydrophila  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas|s__Aeromonas_hydrophila|t__Aeromonas_hydrophila_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Buchnera  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Buchnera|s__Buchnera_aphidicola  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Buchnera|s__Buchnera_aphidicola|t__Buchnera_aphidicola_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Cronobacter  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Cronobacter|s__Cronobacter_malonaticus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Cronobacter|s__Cronobacter_malonaticus|t__Cronobacter_malonaticus_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Cronobacter|s__Cronobacter_sakazakii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Cronobacter|s__Cronobacter_sakazakii|t__Cronobacter_sakazakii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Cronobacter|s__Cronobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Cronobacter|s__Cronobacter_universalis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Cronobacter|s__Cronobacter_universalis|t__GCF_000319325  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_aerogenes|t__GCF_000334515  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_asburiae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_asburiae|t__GCF_000224675  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_cloacae|t__GCF_000492675  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_cloacae|t__GCF_000496775  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_hormaechei|t__GCF_000213995  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_sp_MGH_8  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Enterobacter|s__Enterobacter_sp_MGH_8|t__GCF_000474805  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_hermannii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_hermannii|t__GCF_000248015  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_sp_TW09276  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_sp_TW09276|t__GCF_000208445  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_oxytoca|t__GCF_000247875  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_sp_MS_92_3  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_sp_MS_92_3|t__GCF_000195655  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Morganella  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Morganella|s__Morganella_morganii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Morganella|s__Morganella_morganii|t__GCF_000286435  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pantoea|s__Pantoea_agglomerans  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pantoea|s__Pantoea_agglomerans|t__Pantoea_agglomerans_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pantoea|s__Pantoea_ananatis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pantoea|s__Pantoea_ananatis|t__Pantoea_ananatis_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pantoea|s__Pantoea_dispersa  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pantoea|s__Pantoea_dispersa|t__GCF_000465555  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pantoea|s__Pantoea_vagans  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pantoea|s__Pantoea_vagans|t__GCF_000148935  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pectobacterium  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pectobacterium|s__Pectobacterium_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pectobacterium|s__Pectobacterium_wasabiae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pectobacterium|s__Pectobacterium_wasabiae|t__Pectobacterium_wasabiae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Providencia|s__Providencia_rettgeri  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Providencia|s__Providencia_rettgeri|t__Providencia_rettgeri_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Serratia  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Serratia|s__Serratia_liquefaciens  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Serratia|s__Serratia_liquefaciens|t__GCF_000422085  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Serratia|s__Serratia_marcescens  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Serratia|s__Serratia_marcescens|t__Serratia_marcescens_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Shigella|s__Shigella_flexneri|t__GCF_000268065  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_aegyptius  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Haemophilus|s__Haemophilus_aegyptius|t__GCF_000195005  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_bereziniae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_bereziniae|t__Acinetobacter_bereziniae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_bouvetii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_bouvetii|t__Acinetobacter_bouvetii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_brisouii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_brisouii|t__Acinetobacter_brisouii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_guillouiae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_guillouiae|t__Acinetobacter_guillouiae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_johnsonii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_johnsonii|t__Acinetobacter_johnsonii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_junii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_junii|t__Acinetobacter_junii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_pittii_calcoaceticus_nosocomialis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_pittii_calcoaceticus_nosocomialis|t__Acinetobacter_pittii_calcoaceticus_nosocomialis_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_radioresistens  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_radioresistens|t__Acinetobacter_radioresistens_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_ursingii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_ursingii|t__Acinetobacter_ursingii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Enhydrobacter  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Enhydrobacter|s__Enhydrobacter_aerosaccus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Enhydrobacter|s__Enhydrobacter_aerosaccus|t__GCF_000175915  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Moraxella  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Moraxella|s__Moraxella_catarrhalis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Moraxella|s__Moraxella_catarrhalis|t__Moraxella_catarrhalis_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_denitrificans  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_denitrificans|t__GCF_000349845  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_fragi  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_fragi|t__Pseudomonas_fragi_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_mosselii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_mosselii|t__GCF_000498975  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_nitroreducens  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_nitroreducens|t__GCF_000313755  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_psychrotolerans  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_psychrotolerans|t__GCF_000236825  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_putida  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_putida|t__Pseudomonas_putida_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_stutzeri  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_stutzeri|t__Pseudomonas_stutzeri_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Stenotrophomonas  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Stenotrophomonas|s__Stenotrophomonas_maltophilia  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Stenotrophomonas|s__Stenotrophomonas_maltophilia|t__Stenotrophomonas_maltophilia_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Stenotrophomonas|s__Stenotrophomonas_unclassified  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Mycoplasma|s__Mycoplasma_arginini  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Mycoplasma|s__Mycoplasma_arginini|t__GCF_000367785  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Ureaplasma  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Ureaplasma|s__Ureaplasma_parvum  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Ureaplasma|s__Ureaplasma_parvum|t__Ureaplasma_parvum_unclassified  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Ureaplasma|s__Ureaplasma_unclassified  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Ureaplasma|s__Ureaplasma_urealyticum  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Ureaplasma|s__Ureaplasma_urealyticum|t__Ureaplasma_urealyticum_unclassified  k__Eukaryota|p__Apicomplexa  k__Eukaryota|p__Apicomplexa|c__Aconoidasida  k__Eukaryota|p__Apicomplexa|c__Aconoidasida|o__Haemosporida  k__Eukaryota|p__Apicomplexa|c__Aconoidasida|o__Haemosporida|f__Haemosporida_noname  k__Eukaryota|p__Apicomplexa|c__Aconoidasida|o__Haemosporida|f__Haemosporida_noname|g__Plasmodium  k__Eukaryota|p__Apicomplexa|c__Aconoidasida|o__Haemosporida|f__Haemosporida_noname|g__Plasmodium|s__Plasmodium_berghei  k__Eukaryota|p__Apicomplexa|c__Aconoidasida|o__Haemosporida|f__Haemosporida_noname|g__Plasmodium|s__Plasmodium_berghei|t__GCA_000005395  k__Eukaryota|p__Apicomplexa|c__Coccidia  k__Eukaryota|p__Apicomplexa|c__Coccidia|o__Eucoccidiorida  k__Eukaryota|p__Apicomplexa|c__Coccidia|o__Eucoccidiorida|f__Cryptosporidiidae  k__Eukaryota|p__Apicomplexa|c__Coccidia|o__Eucoccidiorida|f__Cryptosporidiidae|g__Cryptosporidium  k__Eukaryota|p__Apicomplexa|c__Coccidia|o__Eucoccidiorida|f__Cryptosporidiidae|g__Cryptosporidium|s__Cryptosporidium_hominis  k__Eukaryota|p__Apicomplexa|c__Coccidia|o__Eucoccidiorida|f__Cryptosporidiidae|g__Cryptosporidium|s__Cryptosporidium_hominis|t__GCA_000006425  k__Eukaryota|p__Apicomplexa|c__Coccidia|o__Eucoccidiorida|f__Cryptosporidiidae|g__Cryptosporidium|s__Cryptosporidium_parvum  k__Eukaryota|p__Apicomplexa|c__Coccidia|o__Eucoccidiorida|f__Cryptosporidiidae|g__Cryptosporidium|s__Cryptosporidium_parvum|t__GCA_000165345  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Debaryomycetaceae_unclassified  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Nakaseomyces  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Nakaseomyces|s__Candida_glabrata  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Nakaseomyces|s__Candida_glabrata|t__GCA_000002545  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetales_noname  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetales_noname|g__Candida  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetales_noname|g__Candida|s__Candida_albicans  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetales_noname|g__Candida|s__Candida_albicans|t__GCA_000182965  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetales_noname|g__Candida|s__Candida_dubliniensis  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetales_noname|g__Candida|s__Candida_dubliniensis|t__GCA_000026945  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetales_noname|g__Candida|s__Candida_tropicalis  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetales_noname|g__Candida|s__Candida_tropicalis|t__GCA_000006335  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetales_noname|g__Candida|s__Candida_unclassified  k__Bacteria|p__Acidobacteria|c__Acidobacteria_noname  k__Bacteria|p__Acidobacteria|c__Acidobacteria_noname|o__Acidobacteria_noname  k__Bacteria|p__Acidobacteria|c__Acidobacteria_noname|o__Acidobacteria_noname|f__Acidobacteria_noname  k__Bacteria|p__Acidobacteria|c__Acidobacteria_noname|o__Acidobacteria_noname|f__Acidobacteria_noname|g__Candidatus_Chloracidobacterium  k__Bacteria|p__Acidobacteria|c__Acidobacteria_noname|o__Acidobacteria_noname|f__Acidobacteria_noname|g__Candidatus_Chloracidobacterium|s__Candidatus_Chloracidobacterium_thermophilum  k__Bacteria|p__Acidobacteria|c__Acidobacteria_noname|o__Acidobacteria_noname|f__Acidobacteria_noname|g__Candidatus_Chloracidobacterium|s__Candidatus_Chloracidobacterium_thermophilum|t__GCF_000226295  k__Bacteria|p__Acidobacteria|c__Acidobacteriia|o__Acidobacteriales|f__Acidobacteriaceae|g__Terriglobus  k__Bacteria|p__Acidobacteria|c__Acidobacteriia|o__Acidobacteriales|f__Acidobacteriaceae|g__Terriglobus|s__Terriglobus_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinobaculum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinobaculum|s__Actinobaculum_sp_oral_taxon_183  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinobaculum|s__Actinobaculum_sp_oral_taxon_183|t__GCF_000466165  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinobaculum|s__Actinobaculum_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_cardiffensis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_cardiffensis|t__GCF_000364865  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_georgiae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_georgiae|t__GCF_000277685  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_graevenitzii|t__GCF_000466185  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_johnsonii  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_johnsonii|t__Actinomyces_johnsonii_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_johnsonii|t__GCF_000466205  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_johnsonii|t__GCF_000466245  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_massiliensis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_massiliensis|t__Actinomyces_massiliensis_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_massiliensis|t__GCF_000296275  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_naeslundii  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_naeslundii|t__GCF_000285995  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_oris  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_oris|t__GCF_000180155  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_HPA0247  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_HPA0247|t__GCF_000411415  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_ICM47  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_ICM47|t__GCF_000278725  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_170  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_170|t__GCF_000195595  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_171  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_171|t__GCF_000186965  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_172  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_172|t__GCF_000466265  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_175  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_175|t__GCF_000223355  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_180  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_180|t__GCF_000185285  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_181  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_181|t__GCF_000318335  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_448  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_448|t__GCF_000220835  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_848  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_848|t__GCF_000162895  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_849  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_849|t__GCF_000239715  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_ph3  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_ph3|t__GCF_000308055  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_timonensis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_timonensis|t__GCF_000295095  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_viscosus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_viscosus|t__GCF_000175315  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Mobiluncus|s__Mobiluncus_curtisii  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Mobiluncus|s__Mobiluncus_curtisii|t__Mobiluncus_curtisii_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Mobiluncus|s__Mobiluncus_mulieris  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Mobiluncus|s__Mobiluncus_mulieris|t__Mobiluncus_mulieris_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_bovis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_bovis|t__GCF_000183325  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_durum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_durum|t__GCF_000318135  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_genitalium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_genitalium|t__GCF_000143825  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_matruchotii  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_matruchotii|t__Corynebacterium_matruchotii_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_matruchotii|t__GCF_000158635  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Brachybacterium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Brachybacterium|s__Brachybacterium_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Dermabacteraceae_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Kocuria  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Kocuria|s__Kocuria_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Rothia|s__Rothia_aeria  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Rothia|s__Rothia_aeria|t__Rothia_aeria_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Rothia|s__Rothia_dentocariosa|t__GCF_000143585  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Rothia|s__Rothia_dentocariosa|t__GCF_000164695  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_abscessus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_abscessus|t__Mycobacterium_abscessus_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Promicromonosporaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Promicromonosporaceae|g__Promicromonosporaceae_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_acnes|t__GCF_000221145  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_propionicum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_propionicum|t__GCF_000277715  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_sp_KPL1844  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_sp_KPL1844|t__GCF_000477715  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_sp_oral_taxon_192  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_sp_oral_taxon_192|t__GCF_000413315  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_sp_ICM58  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_sp_ICM58|t__GCF_000283035  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_sp_oral_taxon_199  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_sp_oral_taxon_199|t__GCF_000411555  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Atopobium|s__Atopobium_vaginae|t__GCF_000179715  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Coriobacteriaceae_noname|s__Coriobacteriaceae_bacterium_BV3Ac1  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Coriobacteriaceae_noname|s__Coriobacteriaceae_bacterium_BV3Ac1|t__GCF_000468855  k__Bacteria|p__Bacteroidetes|c__Bacteroidetes_noname  k__Bacteria|p__Bacteroidetes|c__Bacteroidetes_noname|o__Bacteroidetes_noname  k__Bacteria|p__Bacteroidetes|c__Bacteroidetes_noname|o__Bacteroidetes_noname|f__Bacteroidetes_noname  k__Bacteria|p__Bacteroidetes|c__Bacteroidetes_noname|o__Bacteroidetes_noname|f__Bacteroidetes_noname|g__Bacteroidetes_noname  k__Bacteria|p__Bacteroidetes|c__Bacteroidetes_noname|o__Bacteroidetes_noname|f__Bacteroidetes_noname|g__Bacteroidetes_noname|s__Bacteroidetes_bacterium_oral_taxon_272  k__Bacteria|p__Bacteroidetes|c__Bacteroidetes_noname|o__Bacteroidetes_noname|f__Bacteroidetes_noname|g__Bacteroidetes_noname|s__Bacteroidetes_bacterium_oral_taxon_272|t__GCF_000442105  k__Bacteria|p__Bacteroidetes|c__Bacteroidetes_noname|o__Bacteroidetes_noname|f__Bacteroidetes_noname|g__Bacteroidetes_noname|s__Bacteroidetes_oral_taxon_274  k__Bacteria|p__Bacteroidetes|c__Bacteroidetes_noname|o__Bacteroidetes_noname|f__Bacteroidetes_noname|g__Bacteroidetes_noname|s__Bacteroidetes_oral_taxon_274|t__GCF_000163695  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_caccae|t__GCF_000273725  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_fragilis|t__GCF_000297755  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_ovatus|t__GCF_000178275  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_ovatus|t__GCF_000273195  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_johnsonii|t__GCF_000156495  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_catoniae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_catoniae|t__GCF_000318215  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_endodontalis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_endodontalis|t__GCF_000174815  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_gingivalis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_gingivalis|t__Porphyromonas_gingivalis_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_gulae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_gulae|t__GCF_000378065  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_sp_oral_taxon_278  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_sp_oral_taxon_278|t__GCF_000467855  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_sp_oral_taxon_279  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_sp_oral_taxon_279|t__GCF_000292995  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Tannerella  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Tannerella|s__Tannerella_forsythia  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Tannerella|s__Tannerella_forsythia|t__GCF_000238215  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Alloprevotella|s__Alloprevotella_rava  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Alloprevotella|s__Alloprevotella_rava|t__GCF_000234115  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Alloprevotella|s__Prevotella_sp_oral_taxon_473  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Alloprevotella|s__Prevotella_sp_oral_taxon_473|t__GCF_000318095  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Candidatus_Prevotella_conceptionensis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Candidatus_Prevotella_conceptionensis|t__GCF_000312305  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_amnii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_amnii|t__GCF_000177355  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_amnii|t__Prevotella_amnii_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_baroniae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_baroniae|t__GCF_000468635  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_dentalis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_dentalis|t__Prevotella_dentalis_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_denticola  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_denticola|t__Prevotella_denticola_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_loescheii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_loescheii|t__GCF_000378085  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_maculosa  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_maculosa|t__GCF_000243015  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_maculosa|t__GCF_000382385  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_maculosa|t__Prevotella_maculosa_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_marshii  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_marshii|t__GCF_000146675  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_melaninogenica|t__GCF_000144405  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_melaninogenica|t__GCF_000163035  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_micans  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_micans|t__Prevotella_micans_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_multiformis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_multiformis|t__GCF_000191065  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_nanceiensis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_nanceiensis|t__GCF_000379965  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_nigrescens  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_nigrescens|t__Prevotella_nigrescens_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_oris  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_oris|t__Prevotella_oris_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_oulorum  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_oulorum|t__GCF_000224615  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_pallens  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_pallens|t__GCF_000220255  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_pleuritidis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_pleuritidis|t__GCF_000468135  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_saccharolytica  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_saccharolytica|t__GCF_000318195  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_sp_BV3P1  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_sp_BV3P1|t__GCF_000479005  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_sp_C561  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_sp_C561|t__GCF_000224595  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_sp_oral_taxon_299  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_sp_oral_taxon_299|t__GCF_000163055  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_sp_oral_taxon_306  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_sp_oral_taxon_306|t__GCF_000257925  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k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_sp_oral_taxon_380|t__GCF_000318255  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_sp_oral_taxon_412  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_sp_oral_taxon_412|t__GCF_000271925  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_sp_oral_taxon_863  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_sp_oral_taxon_863|t__GCF_000466425  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_sputigena  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_sputigena|t__GCF_000173675  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Elizabethkingia|s__Elizabethkingia_unclassified  k__Bacteria|p__Chloroflexi  k__Bacteria|p__Chloroflexi|c__Chloroflexi  k__Bacteria|p__Chloroflexi|c__Chloroflexi|o__Chloroflexales  k__Bacteria|p__Chloroflexi|c__Chloroflexi|o__Chloroflexales|f__Chloroflexaceae  k__Bacteria|p__Chloroflexi|c__Chloroflexi|o__Chloroflexales|f__Chloroflexaceae|g__Roseiflexus  k__Bacteria|p__Chloroflexi|c__Chloroflexi|o__Chloroflexales|f__Chloroflexaceae|g__Roseiflexus|s__Roseiflexus_unclassified  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_radiodurans  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_radiodurans|t__GCF_000008565  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella|s__Gemella_bergeri  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella|s__Gemella_bergeri|t__GCF_000469465  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella|s__Gemella_haemolysans|t__GCF_000173915  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Gemella|s__Gemella_haemolysans|t__GCF_000204355  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Listeriaceae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Listeriaceae|g__Listeria  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Listeriaceae|g__Listeria|s__Listeria_monocytogenes  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Listeriaceae|g__Listeria|s__Listeria_monocytogenes|t__Listeria_monocytogenes_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_pasteuri  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_pasteuri|t__GCF_000494875  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_saprophyticus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_saprophyticus|t__Staphylococcus_saprophyticus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Aerococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Aerococcus|s__Aerococcus_viridans  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Aerococcus|s__Aerococcus_viridans|t__Aerococcus_viridans_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Alloiococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Alloiococcus|s__Alloiococcus_otitis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Alloiococcus|s__Alloiococcus_otitis|t__GCF_000315445  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Carnobacterium  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Carnobacterium|s__Carnobacterium_maltaromaticum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Carnobacteriaceae|g__Carnobacterium|s__Carnobacterium_maltaromaticum|t__Carnobacterium_maltaromaticum_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_dispar  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_dispar|t__Enterococcus_dispar_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_coleohominis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_coleohominis|t__GCF_000161935  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_helveticus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_helveticus|t__Lactobacillus_helveticus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_iners|t__GCF_000179935  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_jensenii  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_jensenii|t__GCF_000162335  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_jensenii|t__Lactobacillus_jensenii_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Pediococcus|s__Pediococcus_acidilactici  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Pediococcus|s__Pediococcus_acidilactici|t__Pediococcus_acidilactici_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_carnosum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_carnosum|t__Leuconostoc_carnosum_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_dysgalactiae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_dysgalactiae|t__Streptococcus_dysgalactiae_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_infantis|t__GCF_000223255  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_intermedius  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_intermedius|t__Streptococcus_intermedius_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_parasanguinis|t__GCF_000260695  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_parasanguinis|t__GCF_000507765  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_2_1_36FAA  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_2_1_36FAA|t__GCF_000161955  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_AS14  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_AS14|t__GCF_000286495  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_BS35b  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_BS35b|t__GCF_000286475  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_C300  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_C300|t__GCF_000187645  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_F0441  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_F0441|t__GCF_000314775  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_F0442  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_F0442|t__GCF_000314795  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_GMD5S  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_GMD5S|t__GCF_000298715  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_HPH0090  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_HPH0090|t__GCF_000411475  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_I_G2  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_I_G2|t__GCF_000479335  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_M143  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_M143|t__GCF_000162495  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_M334  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_M334|t__GCF_000187745  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_SK140  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_SK140|t__GCF_000259525  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_oral_taxon_056  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_oral_taxon_056|t__GCF_000220065  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XIII_Incertae_Sedis|g__Clostridiales_Family_XIII_Incertae_Sedis_noname  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XIII_Incertae_Sedis|g__Clostridiales_Family_XIII_Incertae_Sedis_noname|s__Eubacterium_infirmum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XIII_Incertae_Sedis|g__Clostridiales_Family_XIII_Incertae_Sedis_noname|s__Eubacterium_infirmum|t__GCF_000242675  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XIII_Incertae_Sedis|g__Mogibacterium  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XIII_Incertae_Sedis|g__Mogibacterium|s__Mogibacterium_sp_CM50  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XIII_Incertae_Sedis|g__Mogibacterium|s__Mogibacterium_sp_CM50|t__GCF_000293155  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Parvimonas|s__Parvimonas_sp_oral_taxon_110  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Parvimonas|s__Parvimonas_sp_oral_taxon_110|t__GCF_000214475  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacteriaceae_noname  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacteriaceae_noname|s__Eubacteriaceae_bacterium_ACC19a  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacteriaceae_noname|s__Eubacteriaceae_bacterium_ACC19a|t__GCF_000238115  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacteriaceae_noname|s__Eubacteriaceae_bacterium_CM2  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacteriaceae_noname|s__Eubacteriaceae_bacterium_CM2|t__GCF_000238095  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacteriaceae_noname|s__Eubacteriaceae_bacterium_CM5  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacteriaceae_noname|s__Eubacteriaceae_bacterium_CM5|t__GCF_000238135  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacteriaceae_noname|s__Eubacteriaceae_bacterium_OBRC8  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacteriaceae_noname|s__Eubacteriaceae_bacterium_OBRC8|t__GCF_000293035  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacteriaceae_noname|s__Eubacteriaceae_noname_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_rectale|t__GCF_000209935  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Pseudoramibacter  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Pseudoramibacter|s__Pseudoramibacter_alactolyticus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Pseudoramibacter|s__Pseudoramibacter_alactolyticus|t__GCF_000185505  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Catonella  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Catonella|s__Catonella_morbi  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Catonella|s__Catonella_morbi|t__GCF_000160035  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Johnsonella  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Johnsonella|s__Johnsonella_ignava  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Johnsonella|s__Johnsonella_ignava|t__GCF_000235445  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnoanaerobaculum|s__Lachnoanaerobaculum_saburreum|t__GCF_000185385  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_2_1_46FAA  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Lachnospiraceae_noname|s__Lachnospiraceae_bacterium_2_1_46FAA|t__GCF_000209385  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k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Oribacterium|s__Oribacterium_sp_oral_taxon_078|t__Oribacterium_sp_oral_taxon_078_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Oribacterium|s__Oribacterium_sp_oral_taxon_108  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Oribacterium|s__Oribacterium_sp_oral_taxon_108|t__GCF_000214455  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Roseburia|s__Roseburia_intestinalis|t__GCF_000210655  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Filifactor  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Filifactor|s__Filifactor_alocis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Filifactor|s__Filifactor_alocis|t__GCF_000163895  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k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Dialister|s__Dialister_micraerophilus|t__GCF_000183445  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_genomosp_type_1  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_genomosp_type_1|t__GCF_000177555  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_UPII_135_E  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_UPII_135_E|t__GCF_000221545  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_UPII_199_6  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_UPII_199_6|t__GCF_000214495  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_artemidis  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_artemidis|t__GCF_000187125  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_flueggei  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_flueggei|t__GCF_000160695  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_infelix  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_infelix|t__GCF_000234095  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_noxia  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_noxia|t__GCF_000160555  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_noxia|t__Selenomonas_noxia_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_CM52  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_CM52|t__GCF_000292955  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_F0473  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_F0473|t__GCF_000315545  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_FOBRC6  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_FOBRC6|t__GCF_000286455  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_FOBRC9  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_FOBRC9|t__GCF_000287655  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_oral_taxon_137  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_oral_taxon_137|t__GCF_000183625  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_oral_taxon_138  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_oral_taxon_138|t__GCF_000318175  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_oral_taxon_149  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_oral_taxon_149|t__GCF_000146365  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_oral_taxon_892  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sp_oral_taxon_892|t__GCF_000468035  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sputigena  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Selenomonas|s__Selenomonas_sputigena|t__Selenomonas_sputigena_unclassified  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_parvula|t__GCF_000177435  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_parvula|t__GCF_000215025  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_ACP1  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_ACP1|t__GCF_000286635  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_HPA0037  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_HPA0037|t__GCF_000411535  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_oral_taxon_158  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Veillonella|s__Veillonella_sp_oral_taxon_158|t__GCF_000183505  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_necrophorum  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_necrophorum|t__Fusobacterium_necrophorum_unclassified  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_nucleatum|t__GCF_000218655  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_periodonticum|t__GCF_000160475  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_periodonticum|t__GCF_000163935  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_oral_taxon_370  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_sp_oral_taxon_370|t__GCF_000235465  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_goodfellowii  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_goodfellowii|t__GCF_000176335  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_hofstadii  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_hofstadii|t__GCF_000162955  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_shahii  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_shahii|t__GCF_000373045  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_sp_oral_taxon_215  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_sp_oral_taxon_215|t__GCF_000469505  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_sp_oral_taxon_225  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_sp_oral_taxon_225|t__GCF_000469525  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_wadei|t__GCF_000373345  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Leptotrichiaceae|g__Leptotrichia|s__Leptotrichia_wadei|t__GCF_000469405  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales|f__Caulobacteraceae|g__Brevundimonas|s__Brevundimonas_diminuta  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k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Eikenella|s__Eikenella_corrodens|t__GCF_000158615  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Eikenella|s__Eikenella_corrodens|t__GCF_000504685  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Kingella|s__Kingella_denitrificans  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Kingella|s__Kingella_denitrificans|t__GCF_000190695  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Kingella|s__Kingella_kingae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Kingella|s__Kingella_kingae|t__Kingella_kingae_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Kingella|s__Kingella_oralis  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k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_gracilis  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_gracilis|t__GCF_000175875  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_rectus  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_rectus|t__GCF_000174175  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_showae  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_showae|t__Campylobacter_showae_unclassified  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_showae|t__GCF_000175655  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_showae|t__GCF_000313615  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_showae|t__GCF_000344295  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_sp_10_1_50  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_sp_10_1_50|t__GCF_000238755  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Cardiobacteriales  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Cardiobacteriales|f__Cardiobacteriaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Cardiobacteriales|f__Cardiobacteriaceae|g__Cardiobacteriaceae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Cardiobacteriales|f__Cardiobacteriaceae|g__Cardiobacterium  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Cardiobacteriales|f__Cardiobacteriaceae|g__Cardiobacterium|s__Cardiobacterium_hominis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Cardiobacteriales|f__Cardiobacteriaceae|g__Cardiobacterium|s__Cardiobacterium_hominis|t__GCF_000160655  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Cardiobacteriales|f__Cardiobacteriaceae|g__Cardiobacterium|s__Cardiobacterium_valvarum  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Cardiobacteriales|f__Cardiobacteriaceae|g__Cardiobacterium|s__Cardiobacterium_valvarum|t__GCF_000239355  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Serratia|s__Serratia_proteamaculans  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Serratia|s__Serratia_proteamaculans|t__GCF_000018085  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter|s__Aggregatibacter_actinomycetemcomitans  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter|s__Aggregatibacter_actinomycetemcomitans|t__Aggregatibacter_actinomycetemcomitans_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter|s__Aggregatibacter_sp_oral_taxon_458  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Aggregatibacter|s__Aggregatibacter_sp_oral_taxon_458|t__GCF_000466335  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_alcaligenes  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_alcaligenes|t__Pseudomonas_alcaligenes_unclassified  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_denticola  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_denticola|t__Treponema_denticola_unclassified  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_lecithinolyticum  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_lecithinolyticum|t__GCF_000468055  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_maltophilum  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_maltophilum|t__GCF_000413055  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_medium  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_medium|t__GCF_000413035  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_socranskii  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_socranskii|t__GCF_000413015  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_socranskii|t__Treponema_socranskii_unclassified  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_vincentii  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_vincentii|t__GCF_000175895  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_vincentii|t__GCF_000412995  k__Bacteria|p__Spirochaetes|c__Spirochaetia|o__Spirochaetales|f__Spirochaetaceae|g__Treponema|s__Treponema_vincentii|t__Treponema_vincentii_unclassified  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Fretibacterium  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Fretibacterium|s__Fretibacterium_fastidiosum  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Fretibacterium|s__Fretibacterium_fastidiosum|t__GCF_000210715  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Jonquetella  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Jonquetella|s__Jonquetella_anthropi  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Jonquetella|s__Jonquetella_anthropi|t__Jonquetella_anthropi_unclassified  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Mycoplasma|s__Mycoplasma_orale  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Mycoplasma|s__Mycoplasma_orale|t__GCF_000420105  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Eurotiales|f__Aspergillaceae|g__Aspergillus  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Eurotiales|f__Aspergillaceae|g__Aspergillus|s__Aspergillus_fumigatus  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Eurotiales|f__Aspergillaceae|g__Aspergillus|s__Aspergillus_fumigatus|t__GCA_000002655  k__Eukaryota|p__Basidiomycota  k__Eukaryota|p__Basidiomycota|c__Exobasidiomycetes  k__Eukaryota|p__Basidiomycota|c__Exobasidiomycetes|o__Malasseziales  k__Eukaryota|p__Basidiomycota|c__Exobasidiomycetes|o__Malasseziales|f__Malasseziaceae  k__Eukaryota|p__Basidiomycota|c__Exobasidiomycetes|o__Malasseziales|f__Malasseziaceae|g__Malassezia  k__Eukaryota|p__Basidiomycota|c__Exobasidiomycetes|o__Malasseziales|f__Malasseziaceae|g__Malassezia|s__Malassezia_globosa  k__Eukaryota|p__Basidiomycota|c__Exobasidiomycetes|o__Malasseziales|f__Malasseziaceae|g__Malassezia|s__Malassezia_globosa|t__GCA_000181695  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_178  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_sp_oral_taxon_178|t__GCF_000186685  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Brevibacteriaceae|g__Brevibacterium|s__Brevibacterium_casei  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Brevibacteriaceae|g__Brevibacterium|s__Brevibacterium_casei|t__GCF_000314575  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Brevibacteriaceae|g__Brevibacterium|s__Brevibacterium_mcbrellneri  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Brevibacteriaceae|g__Brevibacterium|s__Brevibacterium_mcbrellneri|t__GCF_000178455  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_lipophiloflavum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_lipophiloflavum|t__GCF_000159635  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_timonense  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_timonense|t__GCF_000312345  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_urealyticum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_urealyticum|t__Corynebacterium_urealyticum_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_variabile  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_variabile|t__GCF_000179395  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Turicella  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Turicella|s__Turicella_otitidis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Turicella|s__Turicella_otitidis|t__Turicella_otitidis_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dietziaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dietziaceae|g__Dietzia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dietziaceae|g__Dietzia|s__Dietzia_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Geodermatophilaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Geodermatophilaceae|g__Geodermatophilaceae_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_terrae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_terrae|t__Gordonia_terrae_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Intrasporangiaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Intrasporangiaceae|g__Janibacter  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Intrasporangiaceae|g__Janibacter|s__Janibacter_hoylei  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Intrasporangiaceae|g__Janibacter|s__Janibacter_hoylei|t__GCF_000297495  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Leifsonia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Leifsonia|s__Leifsonia_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Kocuria|s__Kocuria_rhizophila  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Kocuria|s__Kocuria_rhizophila|t__Kocuria_rhizophila_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micromonosporaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micromonosporaceae|g__Actinoplanes  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micromonosporaceae|g__Actinoplanes|s__Actinoplanes_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_phlei  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_phlei|t__GCF_000257725  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_smegmatis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_smegmatis|t__Mycobacterium_smegmatis_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardioidaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardioidaceae|g__Nocardioides  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardioidaceae|g__Nocardioides|s__Nocardioides_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_3_1_40A  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_3_1_40A|t__GCF_000186105  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcales_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Marinococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Marinococcus|s__Marinococcus_halotolerans  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Marinococcus|s__Marinococcus_halotolerans|t__GCF_000420725  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Facklamia|s__Facklamia_ignava  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Facklamia|s__Facklamia_ignava|t__GCF_000301055  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Facklamia|s__Facklamia_languida  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Facklamia|s__Facklamia_languida|t__GCF_000245795  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_crispatus|t__GCF_000301135  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_I_P16  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_I_P16|t__GCF_000479315  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_SK643  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_SK643|t__GCF_000259505  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_hathewayi|t__GCF_000235505  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Oribacterium|s__Oribacterium_sp_oral_taxon_078|t__GCF_000160135  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Rhodospirillaceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Rhodospirillaceae|g__Rhodospirillum  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Rhodospirillaceae|g__Rhodospirillum|s__Rhodospirillum_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae|g__Sphingobium|s__Sphingobium_unclassified  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Myxococcales  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Myxococcales|f__Myxococcaceae  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Myxococcales|f__Myxococcaceae|g__Myxococcus  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Myxococcales|f__Myxococcaceae|g__Myxococcus|s__Myxococcus_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Alteromonadaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Alteromonadaceae|g__Alishewanella  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Alteromonadaceae|g__Alishewanella|s__Alishewanella_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Rahnella  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Rahnella|s__Rahnella_aquatilis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Rahnella|s__Rahnella_aquatilis|t__Rahnella_aquatilis_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Rahnella|s__Rahnella_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_indicus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_indicus|t__Acinetobacter_indicus_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_venetianus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_venetianus|t__Acinetobacter_venetianus_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_extremaustralis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_extremaustralis|t__GCF_000242115  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_mandelii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_mandelii|t__Pseudomonas_mandelii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_mendocina  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_mendocina|t__Pseudomonas_mendocina_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_sp_313  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_sp_313|t__GCF_000316965  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_syringae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_syringae|t__GCF_000245455  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_thermotolerans  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_thermotolerans|t__GCF_000364625  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Pseudoxanthomonas  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Pseudoxanthomonas|s__Pseudoxanthomonas_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_mundtii  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_mundtii|t__Enterococcus_mundtii_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_gasicomitatum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_gasicomitatum|t__GCF_000196855  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_schindleri  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_schindleri|t__Acinetobacter_schindleri_unclassified  k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales|f__Methanocaldococcaceae|g__Methanocaldococcus  k__Archaea|p__Euryarchaeota|c__Methanococci|o__Methanococcales|f__Methanocaldococcaceae|g__Methanocaldococcus|s__Methanocaldococcus_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_sp_20_3  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_sp_20_3|t__GCF_000162535  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Gracilibacillus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Gracilibacillus|s__Gracilibacillus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_amylovorus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_amylovorus|t__Lactobacillus_amylovorus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_johnsonii  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_johnsonii|t__Lactobacillus_johnsonii_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_saerimneri  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_saerimneri|t__GCF_000317165  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_ultunensis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_ultunensis|t__GCF_000159415  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Pediococcus|s__Pediococcus_lolii  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Pediococcus|s__Pediococcus_lolii|t__GCF_000319265  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_sp_oral_taxon_375  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_sp_oral_taxon_375|t__GCF_000221565  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus|s__Acidaminococcus_sp_HPA0509  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Acidaminococcaceae|g__Acidaminococcus|s__Acidaminococcus_sp_HPA0509|t__GCF_000411395  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_pullorum  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_pullorum|t__GCF_000155495  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Candidatus_Moranella  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Candidatus_Moranella|s__Candidatus_Moranella_endobia  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Candidatus_Moranella|s__Candidatus_Moranella_endobia|t__Candidatus_Moranella_endobia_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinobaculum|s__Actinobaculum_schaalii  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinobaculum|s__Actinobaculum_schaalii|t__GCF_000411135  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Arcanobacterium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Arcanobacterium|s__Arcanobacterium_haemolyticum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Arcanobacterium|s__Arcanobacterium_haemolyticum|t__GCF_000092365  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_sp_GD3  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Collinsella|s__Collinsella_sp_GD3|t__GCF_000333815  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Olsenella|s__Olsenella_profusa  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Olsenella|s__Olsenella_profusa|t__GCF_000468755  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_dorei|t__GCF_000156075  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_vulgatus|t__GCF_000273295  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Macrococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Macrococcus|s__Macrococcus_caseolyticus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Macrococcus|s__Macrococcus_caseolyticus|t__GCF_000010585  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_equorum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_equorum|t__Staphylococcus_equorum_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_cecorum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_cecorum|t__Enterococcus_cecorum_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_raffinosus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_raffinosus|t__Enterococcus_raffinosus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Tetragenococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Tetragenococcus|s__Tetragenococcus_halophilus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Tetragenococcus|s__Tetragenococcus_halophilus|t__GCF_000283615  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Vagococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Vagococcus|s__Vagococcus_lutrae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Vagococcus|s__Vagococcus_lutrae|t__GCF_000498295  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_buchneri  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_buchneri|t__Lactobacillus_buchneri_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_coryniformis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_coryniformis|t__Lactobacillus_coryniformis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_pentosus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_pentosus|t__GCF_000271445  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_gelidum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Leuconostoc|s__Leuconostoc_gelidum|t__Leuconostoc_gelidum_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Oenococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Oenococcus|s__Oenococcus_oeni  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Oenococcus|s__Oenococcus_oeni|t__Oenococcus_oeni_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_colicanis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_colicanis|t__GCF_000371465  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_HGF2  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_HGF2|t__GCF_000183585  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_SS2_1  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_SS2_1|t__GCF_000154545  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_sp_JC140  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_sp_JC140|t__GCF_000321025  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Blautia_sp_KLE_1732  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Blautia|s__Blautia_sp_KLE_1732|t__GCF_000466565  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Clostridium_bifermentans  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptostreptococcaceae|g__Peptostreptococcaceae_noname|s__Clostridium_bifermentans|t__Clostridium_bifermentans_unclassified  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000154385  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Janthinobacterium  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Janthinobacterium|s__Janthinobacterium_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Sutterella|s__Sutterella_parvirubra  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Sutterellaceae|g__Sutterella|s__Sutterella_parvirubra|t__GCF_000250875  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_coli  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_coli|t__Campylobacter_coli_unclassified  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_winghamensis  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_winghamensis|t__GCF_000158455  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinobaculum|s__Actinobaculum_urinale  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinobaculum|s__Actinobaculum_urinale|t__GCF_000420445  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Cellulomonadaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Cellulomonadaceae|g__Cellulomonas  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Cellulomonadaceae|g__Cellulomonas|s__Cellulomonas_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_glucuronolyticum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_glucuronolyticum|t__Corynebacterium_glucuronolyticum_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_massiliense  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_massiliense|t__GCF_000420605  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Brachybacterium|s__Brachybacterium_muris  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Brachybacterium|s__Brachybacterium_muris|t__GCF_000338055  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Brachybacterium|s__Brachybacterium_paraconglomeratum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Brachybacterium|s__Brachybacterium_paraconglomeratum|t__GCF_000233655  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermacoccaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermacoccaceae|g__Kytococcus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermacoccaceae|g__Kytococcus|s__Kytococcus_sedentarius  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermacoccaceae|g__Kytococcus|s__Kytococcus_sedentarius|t__GCF_000023925  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dietziaceae|g__Dietzia|s__Dietzia_cinnamea  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dietziaceae|g__Dietzia|s__Dietzia_cinnamea|t__GCF_000186325  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_aichiensis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_aichiensis|t__GCF_000332975  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Leucobacter  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Leucobacter|s__Leucobacter_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Microbacterium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Microbacterium|s__Microbacterium_barkeri  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Microbacterium|s__Microbacterium_barkeri|t__GCF_000299315  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Microbacterium|s__Microbacterium_laevaniformans  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Microbacterium|s__Microbacterium_laevaniformans|t__GCF_000255595  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Microbacterium|s__Microbacterium_maritypicum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Microbacterium|s__Microbacterium_maritypicum|t__GCF_000455825  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Kocuria|s__Kocuria_atrinae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Kocuria|s__Kocuria_atrinae|t__GCF_000286355  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Kocuria|s__Kocuria_rhizophila|t__GCF_000214115  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Micrococcus|s__Micrococcus_luteus|t__GCF_000176875  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionimicrobium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionimicrobium|s__Propionimicrobium_lymphophilum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionimicrobium|s__Propionimicrobium_lymphophilum|t__GCF_000411175  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Scardovia|s__Scardovia_inopinata  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Bifidobacteriales|f__Bifidobacteriaceae|g__Scardovia|s__Scardovia_inopinata|t__GCF_000163755  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_lentus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_lentus|t__GCF_000286395  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_massiliensis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_massiliensis|t__Staphylococcus_massiliensis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_pettenkoferi  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_pettenkoferi|t__GCF_000260275  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_simulans  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_simulans|t__Staphylococcus_simulans_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_xylosus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_xylosus|t__GCF_000338275  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Aerococcus|s__Aerococcus_urinae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Aerococcus|s__Aerococcus_urinae|t__GCF_000193205  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Ochrobactrum  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Ochrobactrum|s__Ochrobactrum_anthropi  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Ochrobactrum|s__Ochrobactrum_anthropi|t__Ochrobactrum_anthropi_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Methylobacteriaceae|g__Methylobacterium|s__Methylobacterium_populi  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Methylobacteriaceae|g__Methylobacterium|s__Methylobacterium_populi|t__GCF_000019945  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Acetobacter  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Acetobacter|s__Acetobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Achromobacter  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Achromobacter|s__Achromobacter_piechaudii  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Achromobacter|s__Achromobacter_piechaudii|t__Achromobacter_piechaudii_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Achromobacter|s__Achromobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Oligella  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Oligella|s__Oligella_urethralis  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Oligella|s__Oligella_urethralis|t__GCF_000372065  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella|s__Shewanella_baltica  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella|s__Shewanella_baltica|t__Shewanella_baltica_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella|s__Shewanella_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Pasteurella|s__Pasteurella_bettyae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Pasteurella|s__Pasteurella_bettyae|t__GCF_000262245  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_haemolyticus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_haemolyticus|t__Acinetobacter_haemolyticus_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_parvus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_parvus|t__Acinetobacter_parvus_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_sp_CIP_102637  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_sp_CIP_102637|t__GCF_000368425  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_sp_CIP_64_7  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_sp_CIP_64_7|t__GCF_000369745  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_towneri  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_towneri|t__GCF_000368785  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Jonquetella|s__Jonquetella_sp_BV3C21  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Jonquetella|s__Jonquetella_sp_BV3C21|t__GCF_000468895  k__Bacteria|p__Synergistetes|c__Synergistia|o__Synergistales|f__Synergistaceae|g__Jonquetella|s__Jonquetella_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinopolysporaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinopolysporaceae|g__Actinopolyspora  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinopolysporaceae|g__Actinopolyspora|s__Actinopolyspora_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Pseudonocardiaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Pseudonocardiaceae|g__Pseudonocardia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Pseudonocardiaceae|g__Pseudonocardia|s__Pseudonocardia_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Pseudonocardiaceae|g__Saccharomonospora  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Pseudonocardiaceae|g__Saccharomonospora|s__Saccharomonospora_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Pseudonocardiaceae|g__Saccharopolyspora  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Pseudonocardiaceae|g__Saccharopolyspora|s__Saccharopolyspora_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_cellulosilyticus|t__GCF_000273015  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_pyogenes  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_pyogenes|t__GCF_000466505  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_D22  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_D22|t__GCF_000163675  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_stercoris|t__GCF_000413395  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Anoxybacillus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Anoxybacillus|s__Anoxybacillus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_amyloliquefaciens  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_amyloliquefaciens|t__Bacillus_amyloliquefaciens_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_megaterium  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_megaterium|t__Bacillus_megaterium_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_pumilus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_pumilus|t__Bacillus_pumilus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Aerococcus|s__Aerococcus_viridans|t__GCF_000262085  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_equicursoris  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_equicursoris|t__GCF_000312645  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_downei  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_downei|t__GCF_000180055  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_parauberis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_parauberis|t__Streptococcus_parauberis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_GMD4S  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_sp_GMD4S|t__GCF_000296955  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Cetobacterium  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Cetobacterium|s__Cetobacterium_somerae  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Cetobacterium|s__Cetobacterium_somerae|t__GCF_000479045  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_varium  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_varium|t__GCF_000159915  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Bilophila|s__Bilophila_sp_4_1_30  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Desulfovibrionales|f__Desulfovibrionaceae|g__Bilophila|s__Bilophila_sp_4_1_30|t__GCF_000224655  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas|s__Aeromonas_veronii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas|s__Aeromonas_veronii|t__Aeromonas_veronii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_albertii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_albertii|t__Escherichia_albertii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_fergusonii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Escherichia|s__Escherichia_fergusonii|t__Escherichia_fergusonii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_variicola  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Klebsiella|s__Klebsiella_variicola|t__GCF_000025465  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Kosakonia  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Kosakonia|s__Kosakonia_radicincitans  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Kosakonia|s__Kosakonia_radicincitans|t__GCF_000280495  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pectobacterium|s__Pectobacterium_carotovorum  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Pectobacterium|s__Pectobacterium_carotovorum|t__Pectobacterium_carotovorum_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Plesiomonas  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Plesiomonas|s__Plesiomonas_shigelloides  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Plesiomonas|s__Plesiomonas_shigelloides|t__GCF_000392595  k__Archaea|p__Euryarchaeota|c__Halobacteria  k__Archaea|p__Euryarchaeota|c__Halobacteria|o__Halobacteriales  k__Archaea|p__Euryarchaeota|c__Halobacteria|o__Halobacteriales|f__Halobacteriaceae  k__Archaea|p__Euryarchaeota|c__Halobacteria|o__Halobacteriales|f__Halobacteriaceae|g__Halococcus  k__Archaea|p__Euryarchaeota|c__Halobacteria|o__Halobacteriales|f__Halobacteriaceae|g__Halococcus|s__Halococcus_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinobaculum|s__Actinobaculum_massiliense  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinobaculum|s__Actinobaculum_massiliense|t__GCF_000315465  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_coleocanis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Actinomycetaceae|g__Actinomyces|s__Actinomyces_coleocanis|t__GCF_000159015  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_ammoniagenes  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_ammoniagenes|t__GCF_000164115  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_callunae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_callunae|t__GCF_000344785  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_casei  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_casei|t__GCF_000234765  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_doosanense  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_doosanense|t__GCF_000372245  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_efficiens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_efficiens|t__Corynebacterium_efficiens_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_glutamicum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_glutamicum|t__Corynebacterium_glutamicum_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_mastitidis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_mastitidis|t__GCF_000375365  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_nuruki  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_nuruki|t__GCF_000213935  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_resistens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_resistens|t__GCF_000177535  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_sp_HFH0082  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_sp_HFH0082|t__GCF_000411235  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_sp_KPL1824  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_sp_KPL1824|t__GCF_000478095  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_sp_KPL1859  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_sp_KPL1859|t__GCF_000478015  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_ulceribovis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Corynebacteriaceae|g__Corynebacterium|s__Corynebacterium_ulceribovis|t__GCF_000372445  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Brachybacterium|s__Brachybacterium_squillarum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermabacteraceae|g__Brachybacterium|s__Brachybacterium_squillarum|t__GCF_000225825  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermacoccaceae|g__Dermacoccus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermacoccaceae|g__Dermacoccus|s__Dermacoccus_sp_Ellin185  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Dermacoccaceae|g__Dermacoccus|s__Dermacoccus_sp_Ellin185|t__GCF_000152185  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Geodermatophilaceae|g__Blastococcus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Geodermatophilaceae|g__Blastococcus|s__Blastococcus_saxobsidens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Geodermatophilaceae|g__Blastococcus|s__Blastococcus_saxobsidens|t__GCF_000284015  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Geodermatophilaceae|g__Geodermatophilus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Geodermatophilaceae|g__Geodermatophilus|s__Geodermatophilus_obscurus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Geodermatophilaceae|g__Geodermatophilus|s__Geodermatophilus_obscurus|t__GCF_000025345  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Geodermatophilaceae|g__Modestobacter  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Geodermatophilaceae|g__Modestobacter|s__Modestobacter_multiseptatus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Geodermatophilaceae|g__Modestobacter|s__Modestobacter_multiseptatus|t__GCF_000306785  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_bronchialis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_bronchialis|t__GCF_000024785  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_otitidis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_otitidis|t__GCF_000248075  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_paraffinivorans  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_paraffinivorans|t__GCF_000344155  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_polyisoprenivorans  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_polyisoprenivorans|t__Gordonia_polyisoprenivorans_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_rubripertincta  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_rubripertincta|t__GCF_000327325  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_soli  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_soli|t__GCF_000334455  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_sputi  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Gordoniaceae|g__Gordonia|s__Gordonia_sputi|t__GCF_000248055  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Intrasporangiaceae|g__Ornithinimicrobium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Intrasporangiaceae|g__Ornithinimicrobium|s__Ornithinimicrobium_pekingense  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Intrasporangiaceae|g__Ornithinimicrobium|s__Ornithinimicrobium_pekingense|t__GCF_000421185  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Intrasporangiaceae|g__Serinicoccus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Intrasporangiaceae|g__Serinicoccus|s__Serinicoccus_profundi  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Intrasporangiaceae|g__Serinicoccus|s__Serinicoccus_profundi|t__GCF_000224715  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Intrasporangiaceae|g__Serinicoccus|s__Serinicoccus_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Agrococcus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Agrococcus|s__Agrococcus_pavilionensis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Agrococcus|s__Agrococcus_pavilionensis|t__GCF_000400485  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Agromyces  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Agromyces|s__Agromyces_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Clavibacter  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Clavibacter|s__Clavibacter_michiganensis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Clavibacter|s__Clavibacter_michiganensis|t__Clavibacter_michiganensis_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Curtobacterium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Curtobacterium|s__Curtobacterium_flaccumfaciens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Curtobacterium|s__Curtobacterium_flaccumfaciens|t__GCF_000349565  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Curtobacterium|s__Curtobacterium_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Leifsonia|s__Leifsonia_aquatica  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Leifsonia|s__Leifsonia_aquatica|t__GCF_000469485  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Leucobacter|s__Leucobacter_chromiiresistens  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Microbacteriaceae|g__Leucobacter|s__Leucobacter_chromiiresistens|t__GCF_000231305  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Arthrobacter  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Arthrobacter|s__Arthrobacter_arilaitensis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Arthrobacter|s__Arthrobacter_arilaitensis|t__GCF_000197735  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Arthrobacter|s__Arthrobacter_chlorophenolicus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Arthrobacter|s__Arthrobacter_chlorophenolicus|t__GCF_000022025  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Kocuria|s__Kocuria_rhizophila|t__GCF_000010285  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Kocuria|s__Kocuria_sp_UCD_OTCP  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micrococcaceae|g__Kocuria|s__Kocuria_sp_UCD_OTCP|t__GCF_000349605  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micromonosporaceae|g__Salinispora  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Micromonosporaceae|g__Salinispora|s__Salinispora_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_avium  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_avium|t__Mycobacterium_avium_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_fortuitum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_fortuitum|t__GCF_000295855  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_gilvum  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_gilvum|t__Mycobacterium_gilvum_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_intracellulare  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_intracellulare|t__Mycobacterium_intracellulare_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_mageritense  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_mageritense|t__GCF_000233935  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_tusciae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Mycobacteriaceae|g__Mycobacterium|s__Mycobacterium_tusciae|t__GCF_000243415  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nakamurellaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nakamurellaceae|g__Nakamurella  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nakamurellaceae|g__Nakamurella|s__Nakamurella_multipartita  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nakamurellaceae|g__Nakamurella|s__Nakamurella_multipartita|t__GCF_000024365  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiaceae|g__Nocardia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiaceae|g__Nocardia|s__Nocardia_farcinica  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiaceae|g__Nocardia|s__Nocardia_farcinica|t__GCF_000009805  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiaceae|g__Rhodococcus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiaceae|g__Rhodococcus|s__Rhodococcus_equi  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiaceae|g__Rhodococcus|s__Rhodococcus_equi|t__Rhodococcus_equi_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiaceae|g__Rhodococcus|s__Rhodococcus_erythropolis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiaceae|g__Rhodococcus|s__Rhodococcus_erythropolis|t__Rhodococcus_erythropolis_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiaceae|g__Rhodococcus|s__Rhodococcus_qingshengii  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiaceae|g__Rhodococcus|s__Rhodococcus_qingshengii|t__GCF_000341815  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardioidaceae|g__Kribbella  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardioidaceae|g__Kribbella|s__Kribbella_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardioidaceae|g__Nocardioidaceae_noname  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardioidaceae|g__Nocardioidaceae_noname|s__Nocardioidaceae_bacterium_Broad_1  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardioidaceae|g__Nocardioidaceae_noname|s__Nocardioidaceae_bacterium_Broad_1|t__GCF_000192415  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiopsaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiopsaceae|g__Nocardiopsis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiopsaceae|g__Nocardiopsis|s__Nocardiopsis_alba  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Nocardiopsaceae|g__Nocardiopsis|s__Nocardiopsis_alba|t__Nocardiopsis_alba_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_sp_HGH0353  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Propionibacterium|s__Propionibacterium_sp_HGH0353|t__GCF_000413335  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Pseudonocardiaceae|g__Actinomycetospora  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Pseudonocardiaceae|g__Actinomycetospora|s__Actinomycetospora_chiangmaiensis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Pseudonocardiaceae|g__Actinomycetospora|s__Actinomycetospora_chiangmaiensis|t__GCF_000379625  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Sanguibacteraceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Sanguibacteraceae|g__Sanguibacter  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Sanguibacteraceae|g__Sanguibacter|s__Sanguibacter_keddieii  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Sanguibacteraceae|g__Sanguibacter|s__Sanguibacter_keddieii|t__GCF_000024925  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Segniliparaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Segniliparaceae|g__Segniliparus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Segniliparaceae|g__Segniliparus|s__Segniliparus_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Streptomycetaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Streptomycetaceae|g__Streptomyces  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Streptomycetaceae|g__Streptomyces|s__Streptomyces_chartreusis  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Streptomycetaceae|g__Streptomyces|s__Streptomyces_chartreusis|t__Streptomyces_chartreusis_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Streptomycetaceae|g__Streptomyces|s__Streptomyces_coelicoflavus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Streptomycetaceae|g__Streptomyces|s__Streptomyces_coelicoflavus|t__GCF_000241835  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Streptosporangiaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Streptosporangiaceae|g__Streptosporangiaceae_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Thermomonosporaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Thermomonosporaceae|g__Thermomonosporaceae_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Tsukamurellaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Tsukamurellaceae|g__Tsukamurella  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Tsukamurellaceae|g__Tsukamurella|s__Tsukamurella_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Williamsiaceae  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Williamsiaceae|g__Williamsia  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Williamsiaceae|g__Williamsia|s__Williamsia_sp_D3  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Williamsiaceae|g__Williamsia|s__Williamsia_sp_D3|t__GCF_000506245  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Solirubrobacterales  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Solirubrobacterales|f__Solirubrobacterales_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_vulgatus|t__GCF_000012825  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_crevioricanis  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_crevioricanis|t__GCF_000509245  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_macacae  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Porphyromonas|s__Porphyromonas_macacae|t__GCF_000379945  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Prevotellaceae|g__Prevotella|s__Prevotella_disiens|t__GCF_000467875  k__Bacteria|p__Bacteroidetes|c__Cytophagia  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Cytophaga  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Cytophaga|s__Cytophaga_unclassified  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Hymenobacter  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Hymenobacter|s__Hymenobacter_aerophilus  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Hymenobacter|s__Hymenobacter_aerophilus|t__GCF_000382225  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Hymenobacter|s__Hymenobacter_norwichensis  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Hymenobacter|s__Hymenobacter_norwichensis|t__GCF_000420705  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Hymenobacter|s__Hymenobacter_unclassified  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Pontibacter  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Pontibacter|s__Pontibacter_unclassified  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Spirosoma  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Spirosoma|s__Spirosoma_linguale  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Spirosoma|s__Spirosoma_linguale|t__GCF_000024525  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Spirosoma|s__Spirosoma_luteum  k__Bacteria|p__Bacteroidetes|c__Cytophagia|o__Cytophagales|f__Cytophagaceae|g__Spirosoma|s__Spirosoma_luteum|t__GCF_000374065  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Blattabacteriaceae  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Blattabacteriaceae|g__Blattabacterium  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Blattabacteriaceae|g__Blattabacterium|s__Blattabacterium_sp_Blattella_germanica  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Blattabacteriaceae|g__Blattabacterium|s__Blattabacterium_sp_Blattella_germanica|t__GCF_000022605  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Blattabacteriaceae|g__Blattabacterium|s__Blattabacterium_unclassified  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_canimorsus  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_canimorsus|t__GCF_000220625  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_cynodegmi  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Capnocytophaga|s__Capnocytophaga_cynodegmi|t__GCF_000379185  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Chryseobacterium|s__Chryseobacterium_taeanense  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Chryseobacterium|s__Chryseobacterium_taeanense|t__GCF_000304615  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Flavobacteriaceae_noname  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Flavobacteriaceae_noname|s__Flavobacteriaceae_bacterium_3519_10  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Flavobacteriaceae_noname|s__Flavobacteriaceae_bacterium_3519_10|t__GCF_000023725  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Gillisia  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Gillisia|s__Gillisia_unclassified  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Myroides  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Myroides|s__Myroides_odoratus  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Myroides|s__Myroides_odoratus|t__GCF_000243275  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Myroides|s__Myroides_unclassified  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Weeksella  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Weeksella|s__Weeksella_virosa  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Weeksella|s__Weeksella_virosa|t__GCF_000189415  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriales_noname  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriales_noname|g__Flavobacteriales_noname  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriales_noname|g__Flavobacteriales_noname|s__Candidatus_Uzinura_diaspidicola  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriales_noname|g__Flavobacteriales_noname|s__Candidatus_Uzinura_diaspidicola|t__GCF_000331975  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Pedobacter|s__Pedobacter_agri  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Pedobacter|s__Pedobacter_agri|t__GCF_000258495  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Sphingobacterium|s__Sphingobacterium_spiritivorum  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriaceae|g__Sphingobacterium|s__Sphingobacterium_spiritivorum|t__Sphingobacterium_spiritivorum_unclassified  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriales_noname  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriales_noname|g__Niabella  k__Bacteria|p__Bacteroidetes|c__Sphingobacteriia|o__Sphingobacteriales|f__Sphingobacteriales_noname|g__Niabella|s__Niabella_unclassified  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Arthrospira  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Arthrospira|s__Arthrospira_unclassified  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Crinalium  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Crinalium|s__Crinalium_epipsammum  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Crinalium|s__Crinalium_epipsammum|t__GCF_000317495  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Microcoleus|s__Microcoleus_vaginatus  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Microcoleus|s__Microcoleus_vaginatus|t__GCF_000214075  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Oscillatoria  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Oscillatoria|s__Oscillatoria_acuminata  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Oscillatoria|s__Oscillatoria_acuminata|t__GCF_000317105  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Oscillatoria|s__Oscillatoria_nigro_viridis  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Oscillatoria|s__Oscillatoria_nigro_viridis|t__GCF_000317475  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Oscillatoria|s__Oscillatoria_unclassified  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Pseudanabaena  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Oscillatoriales|f__Oscillatoriales_noname|g__Pseudanabaena|s__Pseudanabaena_unclassified  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Pleurocapsales  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Pleurocapsales|f__Pleurocapsales_noname  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Pleurocapsales|f__Pleurocapsales_noname|g__Chroococcidiopsis  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Pleurocapsales|f__Pleurocapsales_noname|g__Chroococcidiopsis|s__Chroococcidiopsis_thermalis  k__Bacteria|p__Cyanobacteria|c__Cyanobacteria_noname|o__Pleurocapsales|f__Pleurocapsales_noname|g__Chroococcidiopsis|s__Chroococcidiopsis_thermalis|t__GCF_000317125  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_aquatilis  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_aquatilis|t__GCF_000378445  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_geothermalis  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_geothermalis|t__GCF_000196275  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_gobiensis  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_gobiensis|t__GCF_000252445  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_wulumuqiensis  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Deinococcales|f__Deinococcaceae|g__Deinococcus|s__Deinococcus_wulumuqiensis|t__GCF_000348665  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Thermales|f__Thermaceae|g__Thermus|s__Thermus_thermophilus  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Thermales|f__Thermaceae|g__Thermus|s__Thermus_thermophilus|t__Thermus_thermophilus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Anoxybacillus|s__Anoxybacillus_flavithermus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Anoxybacillus|s__Anoxybacillus_flavithermus|t__Anoxybacillus_flavithermus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_licheniformis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_licheniformis|t__Bacillus_licheniformis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_smithii  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_smithii|t__GCF_000238675  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_subtilis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Bacillus|s__Bacillus_subtilis|t__Bacillus_subtilis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Geobacillus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Geobacillus|s__Geobacillus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Lysinibacillus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Lysinibacillus|s__Lysinibacillus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Exiguobacterium  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Exiguobacterium|s__Exiguobacterium_pavilionensis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Exiguobacterium|s__Exiguobacterium_pavilionensis|t__GCF_000416965  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Exiguobacterium|s__Exiguobacterium_sibiricum  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Exiguobacterium|s__Exiguobacterium_sibiricum|t__GCF_000019905  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillales_noname|g__Exiguobacterium|s__Exiguobacterium_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Paenibacillaceae|g__Brevibacillus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Paenibacillaceae|g__Brevibacillus|s__Brevibacillus_brevis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Paenibacillaceae|g__Brevibacillus|s__Brevibacillus_brevis|t__Brevibacillus_brevis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Salinicoccus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Salinicoccus|s__Salinicoccus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_arlettae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_arlettae|t__GCF_000295715  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_carnosus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_carnosus|t__GCF_000009405  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_sp_AL1  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_sp_AL1|t__GCF_000292305  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_sp_E463  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_sp_E463|t__GCF_000316945  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_sp_HGB0015  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_sp_HGB0015|t__GCF_000411275  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Eremococcus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Eremococcus|s__Eremococcus_coleocola  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Aerococcaceae|g__Eremococcus|s__Eremococcus_coleocola|t__GCF_000183205  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Catellicoccus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Catellicoccus|s__Catellicoccus_marimammalium  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Catellicoccus|s__Catellicoccus_marimammalium|t__GCF_000313915  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_malodoratus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_malodoratus|t__Enterococcus_malodoratus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_brevis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_brevis|t__Lactobacillus_brevis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Weissella|s__Weissella_paramesenteroides  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Leuconostocaceae|g__Weissella|s__Weissella_paramesenteroides|t__GCF_000160575  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_equi  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_equi|t__Streptococcus_equi_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_minor  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Streptococcaceae|g__Streptococcus|s__Streptococcus_minor|t__GCF_000377005  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_beijerinckii  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_beijerinckii|t__GCF_000016965  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_prevotii|t__GCF_000191725  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_sp_PH9  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Anaerococcus|s__Anaerococcus_sp_PH9|t__GCF_000307225  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Finegoldia|s__Finegoldia_magna|t__GCF_000159695  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Helcococcus  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Helcococcus|s__Helcococcus_kunzii  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Helcococcus|s__Helcococcus_kunzii|t__GCF_000245755  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_lacrimalis|t__GCF_000378725  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_sp_BV3AC2  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_sp_BV3AC2|t__GCF_000478945  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_russii  k__Bacteria|p__Fusobacteria|c__Fusobacteriia|o__Fusobacteriales|f__Fusobacteriaceae|g__Fusobacterium|s__Fusobacterium_russii|t__GCF_000381725  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales|f__Caulobacteraceae|g__Caulobacter|s__Caulobacter_segnis  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Caulobacterales|f__Caulobacteraceae|g__Caulobacter|s__Caulobacter_segnis|t__GCF_000092285  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Aurantimonadaceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Aurantimonadaceae|g__Aurantimonadaceae_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Beijerinckiaceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Beijerinckiaceae|g__Beijerinckiaceae_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bradyrhizobiaceae|g__Nitrobacter  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Bradyrhizobiaceae|g__Nitrobacter|s__Nitrobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Brucella|s__Brucella_ovis  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Brucella|s__Brucella_ovis|t__Brucella_ovis_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Brucella|s__Brucella_pinnipedialis  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Brucella|s__Brucella_pinnipedialis|t__Brucella_pinnipedialis_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Ochrobactrum|s__Ochrobactrum_intermedium  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Brucellaceae|g__Ochrobactrum|s__Ochrobactrum_intermedium|t__Ochrobactrum_intermedium_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Hyphomicrobiaceae|g__Hyphomicrobium  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Hyphomicrobiaceae|g__Hyphomicrobium|s__Hyphomicrobium_denitrificans  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Hyphomicrobiaceae|g__Hyphomicrobium|s__Hyphomicrobium_denitrificans|t__Hyphomicrobium_denitrificans_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Hyphomicrobiaceae|g__Hyphomicrobium|s__Hyphomicrobium_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Methylobacteriaceae|g__Methylobacterium|s__Methylobacterium_extorquens  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Methylobacteriaceae|g__Methylobacterium|s__Methylobacterium_extorquens|t__Methylobacterium_extorquens_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Phyllobacteriaceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Phyllobacteriaceae|g__Mesorhizobium  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Phyllobacteriaceae|g__Mesorhizobium|s__Mesorhizobium_loti  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Phyllobacteriaceae|g__Mesorhizobium|s__Mesorhizobium_loti|t__Mesorhizobium_loti_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Phyllobacteriaceae|g__Mesorhizobium|s__Mesorhizobium_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhizobiaceae|g__Sinorhizobium  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhizobiaceae|g__Sinorhizobium|s__Sinorhizobium_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Xanthobacteraceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Xanthobacteraceae|g__Azorhizobium  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Xanthobacteraceae|g__Azorhizobium|s__Azorhizobium_caulinodans  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Xanthobacteraceae|g__Azorhizobium|s__Azorhizobium_caulinodans|t__GCF_000010525  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Xanthobacteraceae|g__Xanthobacter  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Xanthobacteraceae|g__Xanthobacteraceae_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Xanthobacteraceae|g__Xanthobacter|s__Xanthobacter_autotrophicus  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Xanthobacteraceae|g__Xanthobacter|s__Xanthobacter_autotrophicus|t__GCF_000017645  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodobacterales|f__Rhodobacteraceae|g__Ketogulonicigenium  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodobacterales|f__Rhodobacteraceae|g__Ketogulonicigenium|s__Ketogulonicigenium_vulgare  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodobacterales|f__Rhodobacteraceae|g__Ketogulonicigenium|s__Ketogulonicigenium_vulgare|t__Ketogulonicigenium_vulgare_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodobacterales|f__Rhodobacteraceae|g__Paracoccus|s__Paracoccus_zeaxanthinifaciens  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodobacterales|f__Rhodobacteraceae|g__Paracoccus|s__Paracoccus_zeaxanthinifaciens|t__GCF_000420145  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodobacterales|f__Rhodobacteraceae|g__Rhodobacter  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodobacterales|f__Rhodobacteraceae|g__Rhodobacter|s__Rhodobacter_sphaeroides  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodobacterales|f__Rhodobacteraceae|g__Rhodobacter|s__Rhodobacter_sphaeroides|t__Rhodobacter_sphaeroides_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Acidiphilium  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Acidiphilium|s__Acidiphilium_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Acidocella  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Acidocella|s__Acidocella_sp_MX_AZ02  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Acidocella|s__Acidocella_sp_MX_AZ02|t__GCF_000306035  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Gluconacetobacter  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Gluconacetobacter|s__Gluconacetobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Gluconobacter  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Gluconobacter|s__Gluconobacter_frateurii  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Gluconobacter|s__Gluconobacter_frateurii|t__GCF_000284875  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Gluconobacter|s__Gluconobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Roseomonas|s__Roseomonas_cervicalis  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Roseomonas|s__Roseomonas_cervicalis|t__GCF_000164635  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Roseomonas|s__Roseomonas_sp_B5  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Acetobacteraceae|g__Roseomonas|s__Roseomonas_sp_B5|t__GCF_000292225  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Rhodospirillaceae|g__Azospirillum  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Rhodospirillaceae|g__Azospirillum|s__Azospirillum_lipoferum  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Rhodospirillaceae|g__Azospirillum|s__Azospirillum_lipoferum|t__Azospirillum_lipoferum_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Rhodospirillaceae|g__Azospirillum|s__Azospirillum_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Rhodospirillaceae|g__Novispirillum  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Rhodospirillaceae|g__Novispirillum|s__Novispirillum_itersonii  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhodospirillales|f__Rhodospirillaceae|g__Novispirillum|s__Novispirillum_itersonii|t__GCF_000381985  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rickettsiales  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rickettsiales|f__Rickettsiaceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rickettsiales|f__Rickettsiaceae|g__Rickettsia  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rickettsiales|f__Rickettsiaceae|g__Rickettsia|s__Rickettsia_felis  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rickettsiales|f__Rickettsiaceae|g__Rickettsia|s__Rickettsia_felis|t__GCF_000012145  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rickettsiales|f__Rickettsiaceae|g__Rickettsia|s__Rickettsia_parkeri  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rickettsiales|f__Rickettsiaceae|g__Rickettsia|s__Rickettsia_parkeri|t__GCF_000284195  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Erythrobacteraceae  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Erythrobacteraceae|g__Erythrobacteraceae_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae|g__Blastomonas  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae|g__Blastomonas|s__Blastomonas_unclassified  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae|g__Citromicrobium  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Sphingomonadales|f__Sphingomonadaceae|g__Citromicrobium|s__Citromicrobium_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Achromobacter|s__Achromobacter_xylosoxidans  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Achromobacter|s__Achromobacter_xylosoxidans|t__Achromobacter_xylosoxidans_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Advenella  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Advenella|s__Advenella_kashmirensis  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Advenella|s__Advenella_kashmirensis|t__Advenella_kashmirensis_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Alcaligenes  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Alcaligenes|s__Alcaligenes_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Alcaligenaceae|g__Oligella|s__Oligella_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Ralstonia|s__Ralstonia_solanacearum  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiaceae|g__Ralstonia|s__Ralstonia_solanacearum|t__Ralstonia_solanacearum_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiales_noname|g__Methylibium  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiales_noname|g__Methylibium|s__Methylibium_petroleiphilum  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Burkholderiales_noname|g__Methylibium|s__Methylibium_petroleiphilum|t__GCF_000015725  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Acidovorax|s__Acidovorax_radicis  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Acidovorax|s__Acidovorax_radicis|t__GCF_000204195  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Comamonas|s__Comamonas_testosteroni|t__GCF_000241525  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Variovorax|s__Variovorax_paradoxus  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Comamonadaceae|g__Variovorax|s__Variovorax_paradoxus|t__Variovorax_paradoxus_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Duganella  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Duganella|s__Duganella_zoogloeoides  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Duganella|s__Duganella_zoogloeoides|t__GCF_000383895  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Herbaspirillum|s__Herbaspirillum_seropedicae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Herbaspirillum|s__Herbaspirillum_seropedicae|t__Herbaspirillum_seropedicae_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Janthinobacterium|s__Janthinobacterium_lividum  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Burkholderiales|f__Oxalobacteraceae|g__Janthinobacterium|s__Janthinobacterium_lividum|t__GCF_000242815  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Hydrogenophilales  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Hydrogenophilales|f__Hydrogenophilaceae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Hydrogenophilales|f__Hydrogenophilaceae|g__Thiobacillus  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Hydrogenophilales|f__Hydrogenophilaceae|g__Thiobacillus|s__Thiobacillus_denitrificans  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Hydrogenophilales|f__Hydrogenophilaceae|g__Thiobacillus|s__Thiobacillus_denitrificans|t__Thiobacillus_denitrificans_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Methylophilales  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Methylophilales|f__Methylophilaceae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Methylophilales|f__Methylophilaceae|g__Methylophilus  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Methylophilales|f__Methylophilaceae|g__Methylophilus|s__Methylophilus_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Methylophilales|f__Methylophilaceae|g__Methylotenera  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Methylophilales|f__Methylophilaceae|g__Methylotenera|s__Methylotenera_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Methylophilales|f__Methylophilaceae|g__Methylotenera|s__Methylotenera_versatilis  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Methylophilales|f__Methylophilaceae|g__Methylotenera|s__Methylotenera_versatilis|t__Methylotenera_versatilis_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_shayeganii  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_shayeganii|t__GCF_000226875  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_wadsworthii  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_wadsworthii|t__GCF_000227765  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_weaveri  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Neisseriales|f__Neisseriaceae|g__Neisseria|s__Neisseria_weaveri|t__Neisseria_weaveri_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Nitrosomonadales  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Nitrosomonadales|f__Nitrosomonadaceae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Nitrosomonadales|f__Nitrosomonadaceae|g__Nitrosospira  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Nitrosomonadales|f__Nitrosomonadaceae|g__Nitrosospira|s__Nitrosospira_multiformis  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Nitrosomonadales|f__Nitrosomonadaceae|g__Nitrosospira|s__Nitrosospira_multiformis|t__GCF_000196355  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Nitrosomonadales|f__Nitrosomonadaceae|g__Nitrosospira|s__Nitrosospira_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Rhodocyclales  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Rhodocyclales|f__Rhodocyclaceae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Rhodocyclales|f__Rhodocyclaceae|g__Azospira  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Rhodocyclales|f__Rhodocyclaceae|g__Azospira|s__Azospira_oryzae  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Rhodocyclales|f__Rhodocyclaceae|g__Azospira|s__Azospira_oryzae|t__GCF_000236665  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Rhodocyclales|f__Rhodocyclaceae|g__Methyloversatilis  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Rhodocyclales|f__Rhodocyclaceae|g__Methyloversatilis|s__Methyloversatilis_unclassified  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Rhodocyclales|f__Rhodocyclaceae|g__Thauera  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Rhodocyclales|f__Rhodocyclaceae|g__Thauera|s__Thauera_phenylacetica  k__Bacteria|p__Proteobacteria|c__Betaproteobacteria|o__Rhodocyclales|f__Rhodocyclaceae|g__Thauera|s__Thauera_phenylacetica|t__GCF_000310225  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Bdellovibrionales  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Bdellovibrionales|f__Bacteriovoracaceae  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Bdellovibrionales|f__Bacteriovoracaceae|g__Bacteriovorax  k__Bacteria|p__Proteobacteria|c__Deltaproteobacteria|o__Bdellovibrionales|f__Bacteriovoracaceae|g__Bacteriovorax|s__Bacteriovorax_unclassified  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_upsaliensis  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Campylobacteraceae|g__Campylobacter|s__Campylobacter_upsaliensis|t__Campylobacter_upsaliensis_unclassified  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_bilis  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_bilis|t__Helicobacter_bilis_unclassified  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_canis  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_canis|t__GCF_000507865  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas|s__Aeromonas_media  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas|s__Aeromonas_media|t__GCF_000287215  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas|s__Aeromonas_salmonicida  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Aeromonadales|f__Aeromonadaceae|g__Aeromonas|s__Aeromonas_salmonicida|t__Aeromonas_salmonicida_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Alteromonadaceae|g__Alishewanella|s__Alishewanella_agri  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Alteromonadaceae|g__Alishewanella|s__Alishewanella_agri|t__GCF_000272005  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Alteromonadaceae|g__Marinobacter  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Alteromonadaceae|g__Marinobacter|s__Marinobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella|s__Shewanella_decolorationis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella|s__Shewanella_decolorationis|t__GCF_000485795  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella|s__Shewanella_oneidensis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Shewanellaceae|g__Shewanella|s__Shewanella_oneidensis|t__GCF_000146165  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Chromatiales|f__Chromatiaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Chromatiales|f__Chromatiaceae|g__Rheinheimera  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Chromatiales|f__Chromatiaceae|g__Rheinheimera|s__Rheinheimera_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Dickeya  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Dickeya|s__Dickeya_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Erwinia  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Erwinia|s__Erwinia_billingiae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Erwinia|s__Erwinia_billingiae|t__GCF_000196615  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Legionellales  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Legionellales|f__Coxiellaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Legionellales|f__Coxiellaceae|g__Rickettsiella  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Legionellales|f__Coxiellaceae|g__Rickettsiella|s__Rickettsiella_grylli  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Legionellales|f__Coxiellaceae|g__Rickettsiella|s__Rickettsiella_grylli|t__GCF_000168295  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Legionellales|f__Legionellaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Legionellales|f__Legionellaceae|g__Legionellaceae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Oceanospirillales|f__Halomonadaceae|g__Halomonas|s__Halomonas_stevensii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Oceanospirillales|f__Halomonadaceae|g__Halomonas|s__Halomonas_stevensii|t__GCF_000275725  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Pasteurella|s__Pasteurella_dagmatis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Pasteurella|s__Pasteurella_dagmatis|t__GCF_000163475  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Pasteurella|s__Pasteurella_multocida  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pasteurellales|f__Pasteurellaceae|g__Pasteurella|s__Pasteurella_multocida|t__Pasteurella_multocida_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_beijerinckii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_beijerinckii|t__Acinetobacter_beijerinckii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_radioresistens|t__GCF_000368885  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_soli  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_soli|t__Acinetobacter_soli_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_sp_CIP_A162  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Acinetobacter|s__Acinetobacter_sp_CIP_A162|t__GCF_000367905  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Psychrobacter  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Psychrobacter|s__Psychrobacter_aquaticus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Psychrobacter|s__Psychrobacter_aquaticus|t__GCF_000471625  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Psychrobacter|s__Psychrobacter_arcticus  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Psychrobacter|s__Psychrobacter_arcticus|t__GCF_000012305  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Psychrobacter|s__Psychrobacter_cryohalolentis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Psychrobacter|s__Psychrobacter_cryohalolentis|t__GCF_000013905  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Psychrobacter|s__Psychrobacter_sp_1501_2011  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Moraxellaceae|g__Psychrobacter|s__Psychrobacter_sp_1501_2011|t__GCF_000213615  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Cellvibrio  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Cellvibrio|s__Cellvibrio_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_alcaliphila  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_alcaliphila|t__GCF_000319815  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_avellanae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_avellanae|t__GCF_000302915  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_chloritidismutans  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_chloritidismutans|t__GCF_000495915  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_entomophila  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_entomophila|t__GCF_000026105  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_fluorescens  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_fluorescens|t__GCF_000263675  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_fragi|t__GCF_000250615  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_fuscovaginae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_fuscovaginae|t__Pseudomonas_fuscovaginae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_gingeri  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_gingeri|t__GCF_000280765  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_luteola  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_luteola|t__GCF_000282775  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_monteilii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_monteilii|t__GCF_000262005  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_poae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_poae|t__GCF_000336465  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_protegens  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_protegens|t__Pseudomonas_protegens_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_psychrophila  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_psychrophila|t__GCF_000282975  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_sp_CF149  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_sp_CF149|t__GCF_000416155  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_synxantha  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_synxantha|t__GCF_000263715  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_syringae_group_genomosp_3  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_syringae_group_genomosp_3|t__Pseudomonas_syringae_group_genomosp_3_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_syringae|t__Pseudomonas_syringae_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_taiwanensis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_taiwanensis|t__GCF_000500605  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_veronii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_veronii|t__GCF_000350565  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_viridiflava  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Pseudomonadales|f__Pseudomonadaceae|g__Pseudomonas|s__Pseudomonas_viridiflava|t__GCF_000307715  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Sinobacteraceae|g__Hydrocarboniphaga  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Sinobacteraceae|g__Hydrocarboniphaga|s__Hydrocarboniphaga_effusa  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Sinobacteraceae|g__Hydrocarboniphaga|s__Hydrocarboniphaga_effusa|t__GCF_000271305  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Rhodanobacter  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Rhodanobacter|s__Rhodanobacter_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonadaceae_noname  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonadaceae_noname|s__Pseudomonas_geniculata  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonadaceae_noname|s__Pseudomonas_geniculata|t__GCF_000258575  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonas  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonas|s__Xanthomonas_citri  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonas|s__Xanthomonas_citri|t__Xanthomonas_citri_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonas|s__Xanthomonas_translucens  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonas|s__Xanthomonas_translucens|t__Xanthomonas_translucens_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonas|s__Xanthomonas_vasicola  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonas|s__Xanthomonas_vasicola|t__Xanthomonas_vasicola_unclassified  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Mycoplasma|s__Mycoplasma_canis  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Mycoplasma|s__Mycoplasma_canis|t__Mycoplasma_canis_unclassified  k__Eukaryota|p__Apicomplexa|c__Aconoidasida|o__Haemosporida|f__Haemosporida_noname|g__Plasmodium|s__Plasmodium_falciparum  k__Eukaryota|p__Apicomplexa|c__Aconoidasida|o__Haemosporida|f__Haemosporida_noname|g__Plasmodium|s__Plasmodium_falciparum|t__GCA_000002765  k__Eukaryota|p__Ascomycota|c__Dothideomycetes  k__Eukaryota|p__Ascomycota|c__Dothideomycetes|o__Pleosporales  k__Eukaryota|p__Ascomycota|c__Dothideomycetes|o__Pleosporales|f__Pleosporaceae  k__Eukaryota|p__Ascomycota|c__Dothideomycetes|o__Pleosporales|f__Pleosporaceae|g__Pyrenophora  k__Eukaryota|p__Ascomycota|c__Dothideomycetes|o__Pleosporales|f__Pleosporaceae|g__Pyrenophora|s__Pyrenophora_tritici_repentis  k__Eukaryota|p__Ascomycota|c__Dothideomycetes|o__Pleosporales|f__Pleosporaceae|g__Pyrenophora|s__Pyrenophora_tritici_repentis|t__GCA_000149985  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Eurotiales|f__Aspergillaceae|g__Aspergillus|s__Aspergillus_niger  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Eurotiales|f__Aspergillaceae|g__Aspergillus|s__Aspergillus_niger|t__GCA_000002855  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Arthrodermataceae  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Arthrodermataceae|g__Arthroderma  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Arthrodermataceae|g__Arthrodermataceae_unclassified  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Arthrodermataceae|g__Arthroderma|s__Arthroderma_benhamiae  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Arthrodermataceae|g__Arthroderma|s__Arthroderma_benhamiae|t__GCA_000151125  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Arthrodermataceae|g__Trichophyton  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Arthrodermataceae|g__Trichophyton|s__Trichophyton_verrucosum  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Arthrodermataceae|g__Trichophyton|s__Trichophyton_verrucosum|t__GCA_000151505  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Onygenales_noname  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Onygenales_noname|g__Coccidioides  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Onygenales_noname|g__Coccidioides|s__Coccidioides_immitis  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Onygenales_noname|g__Coccidioides|s__Coccidioides_immitis|t__GCA_000149335  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Onygenales_noname|g__Coccidioides|s__Coccidioides_posadasii  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Onygenales_noname|g__Coccidioides|s__Coccidioides_posadasii|t__GCA_000151335  k__Eukaryota|p__Ascomycota|c__Eurotiomycetes|o__Onygenales|f__Onygenales_noname|g__Onygenales_noname_unclassified  k__Eukaryota|p__Ascomycota|c__Leotiomycetes  k__Eukaryota|p__Ascomycota|c__Leotiomycetes|o__Helotiales  k__Eukaryota|p__Ascomycota|c__Leotiomycetes|o__Helotiales|f__Sclerotiniaceae  k__Eukaryota|p__Ascomycota|c__Leotiomycetes|o__Helotiales|f__Sclerotiniaceae|g__Botryotinia  k__Eukaryota|p__Ascomycota|c__Leotiomycetes|o__Helotiales|f__Sclerotiniaceae|g__Botryotinia|s__Botryotinia_fuckeliana  k__Eukaryota|p__Ascomycota|c__Leotiomycetes|o__Helotiales|f__Sclerotiniaceae|g__Botryotinia|s__Botryotinia_fuckeliana|t__GCA_000143535  k__Eukaryota|p__Ascomycota|c__Leotiomycetes|o__Helotiales|f__Sclerotiniaceae|g__Sclerotiniaceae_unclassified  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Debaryomyces  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Debaryomyces|s__Debaryomyces_hansenii  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Debaryomyces|s__Debaryomyces_hansenii|t__GCA_000006445  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Lodderomyces  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Lodderomyces|s__Lodderomyces_elongisporus  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Lodderomyces|s__Lodderomyces_elongisporus|t__GCA_000149685  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Meyerozyma  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Meyerozyma|s__Meyerozyma_guilliermondii  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Debaryomycetaceae|g__Meyerozyma|s__Meyerozyma_guilliermondii|t__GCA_000149425  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Dipodascaceae  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Dipodascaceae|g__Yarrowia  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Dipodascaceae|g__Yarrowia|s__Yarrowia_lipolytica  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Dipodascaceae|g__Yarrowia|s__Yarrowia_lipolytica|t__GCA_000002525  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Metschnikowiaceae  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Metschnikowiaceae|g__Clavispora  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Metschnikowiaceae|g__Clavispora|s__Clavispora_lusitaniae  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Metschnikowiaceae|g__Clavispora|s__Clavispora_lusitaniae|t__GCA_000003835  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Eremothecium  k__Eukaryota|p__Ascomycota|c__Saccharomycetes|o__Saccharomycetales|f__Saccharomycetaceae|g__Eremothecium|s__Eremothecium_unclassified  k__Eukaryota|p__Ascomycota|c__Sordariomycetes  k__Eukaryota|p__Ascomycota|c__Sordariomycetes|o__Hypocreales  k__Eukaryota|p__Ascomycota|c__Sordariomycetes|o__Hypocreales|f__Nectriaceae  k__Eukaryota|p__Ascomycota|c__Sordariomycetes|o__Hypocreales|f__Nectriaceae|g__Fusarium  k__Eukaryota|p__Ascomycota|c__Sordariomycetes|o__Hypocreales|f__Nectriaceae|g__Fusarium|s__Fusarium_unclassified  k__Eukaryota|p__Ascomycota|c__Sordariomycetes|o__Sordariales  k__Eukaryota|p__Ascomycota|c__Sordariomycetes|o__Sordariales|f__Chaetomiaceae  k__Eukaryota|p__Ascomycota|c__Sordariomycetes|o__Sordariales|f__Chaetomiaceae|g__Chaetomium  k__Eukaryota|p__Ascomycota|c__Sordariomycetes|o__Sordariales|f__Chaetomiaceae|g__Chaetomium|s__Chaetomium_globosum  k__Eukaryota|p__Ascomycota|c__Sordariomycetes|o__Sordariales|f__Chaetomiaceae|g__Chaetomium|s__Chaetomium_globosum|t__GCA_000143365  k__Eukaryota|p__Basidiomycota|c__Tremellomycetes  k__Eukaryota|p__Basidiomycota|c__Tremellomycetes|o__Tremellales  k__Eukaryota|p__Basidiomycota|c__Tremellomycetes|o__Tremellales|f__Tremellaceae  k__Eukaryota|p__Basidiomycota|c__Tremellomycetes|o__Tremellales|f__Tremellaceae|g__Filobasidiella  k__Eukaryota|p__Basidiomycota|c__Tremellomycetes|o__Tremellales|f__Tremellaceae|g__Filobasidiella|s__Cryptococcus_neoformans  k__Eukaryota|p__Basidiomycota|c__Tremellomycetes|o__Tremellales|f__Tremellaceae|g__Filobasidiella|s__Cryptococcus_neoformans|t__Cryptococcus_neoformans_unclassified  k__Eukaryota|p__Basidiomycota|c__Ustilaginomycetes  k__Eukaryota|p__Basidiomycota|c__Ustilaginomycetes|o__Ustilaginales  k__Eukaryota|p__Basidiomycota|c__Ustilaginomycetes|o__Ustilaginales|f__Ustilaginaceae  k__Eukaryota|p__Basidiomycota|c__Ustilaginomycetes|o__Ustilaginales|f__Ustilaginaceae|g__Ustilago  k__Eukaryota|p__Basidiomycota|c__Ustilaginomycetes|o__Ustilaginales|f__Ustilaginaceae|g__Ustilago|s__Ustilago_maydis  k__Eukaryota|p__Basidiomycota|c__Ustilaginomycetes|o__Ustilaginales|f__Ustilaginaceae|g__Ustilago|s__Ustilago_maydis|t__GCA_000328475  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Lachnospiraceae|g__Dorea|s__Dorea_formicigenerans|t__GCF_000169235  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_cinaedi  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_cinaedi|t__Helicobacter_cinaedi_unclassified  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_fennelliae  k__Bacteria|p__Proteobacteria|c__Epsilonproteobacteria|o__Campylobacterales|f__Helicobacteraceae|g__Helicobacter|s__Helicobacter_fennelliae|t__GCF_000509365  k__Archaea|p__Euryarchaeota|c__Thermococci  k__Archaea|p__Euryarchaeota|c__Thermococci|o__Thermococcales  k__Archaea|p__Euryarchaeota|c__Thermococci|o__Thermococcales|f__Thermococcaceae  k__Archaea|p__Euryarchaeota|c__Thermococci|o__Thermococcales|f__Thermococcaceae|g__Pyrococcus  k__Archaea|p__Euryarchaeota|c__Thermococci|o__Thermococcales|f__Thermococcaceae|g__Pyrococcus|s__Pyrococcus_yayanosii  k__Archaea|p__Euryarchaeota|c__Thermococci|o__Thermococcales|f__Thermococcaceae|g__Pyrococcus|s__Pyrococcus_yayanosii|t__GCF_000215995  k__Archaea|p__Euryarchaeota|c__Thermococci|o__Thermococcales|f__Thermococcaceae|g__Thermococcus  k__Archaea|p__Euryarchaeota|c__Thermococci|o__Thermococcales|f__Thermococcaceae|g__Thermococcus|s__Thermococcus_unclassified  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Microlunatus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Microlunatus|s__Microlunatus_phosphovorus  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Actinomycetales|f__Propionibacteriaceae|g__Microlunatus|s__Microlunatus_phosphovorus|t__GCF_000270245  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Olsenella|s__Olsenella_sp_oral_taxon_809  k__Bacteria|p__Actinobacteria|c__Actinobacteria|o__Coriobacteriales|f__Coriobacteriaceae|g__Olsenella|s__Olsenella_sp_oral_taxon_809|t__GCF_000233535  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_xylanisolvens|t__GCF_000273315  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Thermales|f__Thermaceae|g__Meiothermus  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Thermales|f__Thermaceae|g__Meiothermus|s__Meiothermus_silvanus  k__Bacteria|p__Deinococcus_Thermus|c__Deinococci|o__Thermales|f__Thermaceae|g__Meiothermus|s__Meiothermus_silvanus|t__GCF_000092125  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Alicyclobacillaceae|g__Alicyclobacillus|s__Alicyclobacillus_pohliae  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Alicyclobacillaceae|g__Alicyclobacillus|s__Alicyclobacillus_pohliae|t__GCF_000376225  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Paenibacillaceae|g__Brevibacillus|s__Brevibacillus_borstelensis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Paenibacillaceae|g__Brevibacillus|s__Brevibacillus_borstelensis|t__GCF_000353565  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_antri  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_antri|t__GCF_000160835  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_farciminis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_farciminis|t__GCF_000184535  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_fermentum|t__GCF_000466785  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_phytofermentans  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_phytofermentans|t__GCF_000018685  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_MSTE9  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiaceae|g__Clostridium|s__Clostridium_sp_MSTE9|t__GCF_000277625  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_sp_oral_taxon_836  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Clostridiales_Family_XI_Incertae_Sedis|g__Peptoniphilus|s__Peptoniphilus_sp_oral_taxon_836|t__GCF_000179335  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Eubacteriaceae|g__Eubacterium|s__Eubacterium_rectale|t__GCF_000209955  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhizobiaceae|g__Shinella  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhizobiaceae|g__Shinella|s__Shinella_zoogloeoides  k__Bacteria|p__Proteobacteria|c__Alphaproteobacteria|o__Rhizobiales|f__Rhizobiaceae|g__Shinella|s__Shinella_zoogloeoides|t__GCF_000496935  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Pseudoalteromonadaceae|g__Pseudoalteromonas  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Pseudoalteromonadaceae|g__Pseudoalteromonas|s__Pseudoalteromonas_haloplanktis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Pseudoalteromonadaceae|g__Pseudoalteromonas|s__Pseudoalteromonas_haloplanktis|t__Pseudoalteromonas_haloplanktis_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Pseudoalteromonadaceae|g__Pseudoalteromonas|s__Pseudoalteromonas_undina  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Alteromonadales|f__Pseudoalteromonadaceae|g__Pseudoalteromonas|s__Pseudoalteromonas_undina|t__GCF_000238275  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Providencia|s__Providencia_stuartii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Enterobacteriales|f__Enterobacteriaceae|g__Providencia|s__Providencia_stuartii|t__Providencia_stuartii_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Oceanospirillales|f__Halomonadaceae|g__Halomonas|s__Halomonas_boliviensis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Oceanospirillales|f__Halomonadaceae|g__Halomonas|s__Halomonas_boliviensis|t__GCF_000236035  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Vibrionales  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Vibrionales|f__Vibrionaceae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Vibrionales|f__Vibrionaceae|g__Vibrio  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Vibrionales|f__Vibrionaceae|g__Vibrio|s__Vibrio_kanaloae  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Vibrionales|f__Vibrionaceae|g__Vibrio|s__Vibrio_kanaloae|t__GCF_000272165  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonas|s__Xanthomonas_axonopodis  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonas|s__Xanthomonas_axonopodis|t__Xanthomonas_axonopodis_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonas|s__Xanthomonas_fuscans  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Xanthomonadales|f__Xanthomonadaceae|g__Xanthomonas|s__Xanthomonas_fuscans|t__Xanthomonas_fuscans_unclassified  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Mycoplasma|s__Mycoplasma_bovis  k__Bacteria|p__Tenericutes|c__Mollicutes|o__Mycoplasmatales|f__Mycoplasmataceae|g__Mycoplasma|s__Mycoplasma_bovis|t__Mycoplasma_bovis_unclassified  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Zunongwangia  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Zunongwangia|s__Zunongwangia_profunda  k__Bacteria|p__Bacteroidetes|c__Flavobacteriia|o__Flavobacteriales|f__Flavobacteriaceae|g__Zunongwangia|s__Zunongwangia_profunda|t__GCF_000023465  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_faecium|t__GCF_000294895  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_pallens  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_pallens|t__Enterococcus_pallens_unclassified  k__Bacteria|p__Planctomycetes  k__Bacteria|p__Planctomycetes|c__Planctomycetia  k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales  k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Planctomycetaceae  k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Planctomycetaceae|g__Rhodopirellula  k__Bacteria|p__Planctomycetes|c__Planctomycetia|o__Planctomycetales|f__Planctomycetaceae|g__Rhodopirellula|s__Rhodopirellula_unclassified  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Vibrionales|f__Vibrionaceae|g__Vibrio|s__Vibrio_furnissii  k__Bacteria|p__Proteobacteria|c__Gammaproteobacteria|o__Vibrionales|f__Vibrionaceae|g__Vibrio|s__Vibrio_furnissii|t__Vibrio_furnissii_unclassified  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Porphyromonadaceae|g__Parabacteroides|s__Parabacteroides_merdae|t__GCF_000307495  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_2_2_4  k__Bacteria|p__Bacteroidetes|c__Bacteroidia|o__Bacteroidales|f__Bacteroidaceae|g__Bacteroides|s__Bacteroides_sp_2_2_4|t__GCF_000157055  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Lysinibacillus|s__Lysinibacillus_fusiformis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Lysinibacillus|s__Lysinibacillus_fusiformis|t__Lysinibacillus_fusiformis_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Lysinibacillus|s__Lysinibacillus_sphaericus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Lysinibacillus|s__Lysinibacillus_sphaericus|t__Lysinibacillus_sphaericus_unclassified  k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobacterium  k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae|g__Methanobacterium|s__Methanobacterium_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Lysinibacillus|s__Lysinibacillus_boronitolerans  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Bacillaceae|g__Lysinibacillus|s__Lysinibacillus_boronitolerans|t__GCF_000286375  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_vitulinus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Bacillales|f__Staphylococcaceae|g__Staphylococcus|s__Staphylococcus_vitulinus|t__GCF_000286335  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Bavariicoccus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Bavariicoccus|s__Bavariicoccus_seileri  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Bavariicoccus|s__Bavariicoccus_seileri|t__GCF_000421665  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis  k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085  k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1  k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
Candela_Africa    H1         h1         stool                    n        43   female  tanzania  Illumina               25981789  dedauko  nd                      nd           nd           nd             nd                       nd                      nd           nd                                          nd                    nd     nd                nd                   nd                   nd            nd             nd                      nd      nd                 nd                      nd              nd                      nd                        nd                       nd         nd        nd       nd            nd       nd     nd       nd     nd                    nd                  nd             nd                nd           nd          nd                         nd               nd      nd                     nd                      nd                  nd                           nd                     nd                           nd     nd              nd                              nd           nd      nd           nd        nd    nd      nd        nd       nd       nd            nd          nd            nd                    nd                nd        nd                    nd              nd            nd         nd        nd     nd      nd            nd              nd   nd          nd                nd             nd        nd             nd              nd         nd          nd                     nd   nd            nd                                                          nd            nd                                nd         nd           nd              nd              nd                   nd               nd                     nd              nd               nd                  nd                     nd         nd                     nd                nd             nd               nd               nd    nd                                    nd              nd    nd   nd                 nd         nd    nd                nd       nd         nd           nd               nd                    nd   nd    nd   nd  nd  nd       nd  nd   nd    nd         nd         nd                        nd         nd             nd                   nd      nd                   nd                   nd                            nd                     nd                       nd                                               nd                                                       nd                                       nd                    nd                  nd                 nd                                                      nd          nd         nd        nd                  nd              nd      nd      nd      nd      nd        nd    nd   nd   nd    nd   nd     nd    nd    nd    nd    nd   nd            nd            nd              nd              nd   nd  nd           nd             nd          nd    nd               nd               nd     nd           nd      nd     nd      nd     nd         nd    nd    nd     nd       nd       nd                             nd               nd         nd          nd            nd    nd                           nd     1.17419     1.17419                      1.17419                                         1.17419                                                               1.17419                                                                                      1.17419                                                                                                            0.92002                                                                                                                                          0.92002                                                                                                                                                                                     0.25417                                                                                                                                               0.0                                                                                                            0.0                                                                                                                                         0.0                                                                                                                                                          98.82581     0.0                           0.0                                             0.0                                                                 0.0                                                                                      0.0                                                                                                                        0.02366                        0.02366                                          0.00000                                                             0.00000                                                                                 0.00000                                                                                                0.0                                                                                                                                0.0                                                                                                                                                                         0.0000                                                                                                                              0.0000                                                                                                                                                                        0.0                                                                                                                              0.0                                                                                                                                               0.0                                                                                                    0.0                                                                                                                              0.0                                                                                                                                               0.00000                                                                               0.00000                                                                                         0.00000                                                                                                                0.00000                                                                                                                                                    0.0                                                                                                                    0.00000                                                               0.00000                                                                                     0.00000                                                                                                        0.0                                                                                                                                            0.0                                                                                                                                                                                         0.0                                                                                                                                         0.0                                                                                                                                                          0.0                                                                                                                                       0.0                                                                                                                                                                               0.00000                                                                                                                                       0.00000                                                                                                                                                        0.00000                                                                                                                                  0.00000                                                                                                                                                                         0.0                                                                                                                                                 0.0                                                                                                                                                                  0.00000                                                                                                    0.00000                                                                                                                             0.00000                                                                                                                                                                   0.02366                                                              0.02366                                                                                   0.00000                                                                                                    0.00000                                                                                                                                   0.00000                                                                                                                                                    0.0                                                                                                    0.0                                                                                                                          0.0                                                                                                                                           0.0                                                                                                                       0.0                                                                                                                                        0.02366                                                                                                  0.02366                                                                                                                             0.02366                                                                                                                                              0.0                                                                                                                                  0.0                                                                                                                   0.0                                                                                                                                                      0.0                                                                                                                                                                       0.00000                                                                                                  0.0                                                                                                                           0.0                                                                                                                                            0.00000                                                                                                                              0.0                                                                                                        0.0                                                                                                                                   0.0                                                                                                                                                    0.0                                                                                                    0.0                                                                                                                              0.0                                                                                                  0.0                                                                                                                        0.0                                                                                                                                         30.61710                      30.61710                                     30.61710                                                      0.26035                                                                         0.26035                                                                                        0.0                                                                                                                     0.0                                                                                                                                      0.00000                                                                                                              0.00000                                                                                                                                                 0.00000                                                                                                                        0.00000                                                                                                                                                                     0.0                                                                                                                  0.0                                                                                                                                   0.000                                                                                                                   0.000                                                                                                                                    0.00000                                                                                                                   0.00000                                                                                                                                    0.00000                                                                                                             0.00000                                                                                                                                               0.00000                                                                                                                 0.00000                                                                                                                                                       0.0000                                                                                                               0.0000                                                                                                                                0.0000                                                                                                                   0.0000                                                                                                                                                          0.21494                                                                                                                0.21494                                                                                                                                                     0.04541                                                                                                                    0.04541                                                                                                                                     0.00000                                                                                                                    0.00000                                                                                                                                                             0.00000                                                                                                              0.00000                                                                                                                               0.00000                                                                                                              0.00000                                                                                                                                                 0.00000                                                                                                                0.00000                                                                                                                                 0.00000                                                                                                                  0.00000                                                                                                                                                         0.0                                                                                                                        0.0                                                                                                                                         0.00000                                                                                                                 0.00000                                                                                                                                                       0.00000                                                                                                                        0.00000                                                                                                                                                                     0.00000                                                                                                                 0.00000                                                                                                                                                       0.00000                                                                                                                                  0.00000                                                                                                                0.00000                                                                                                                                                     0.00000                                                                                                                     0.00000                                                                                                                                                               0.00000                                                                               0.00000                                                                                                       0.00000                                                                                                                                      0.00000                                                                                                                                                       0.81440                                                                             0.00000                                                                                            0.00000                                                                                                                            0.00000                                                                                                                                             0.0                                                                                                0.0                                                                                                                           0.0                                                                                                                                            0.04674                                                                                            0.00000                                                                                                                        0.00000                                                                                                                                         0.04674                                                                                                                        0.76765                                                                                                0.00000                                                                                                                              0.00000                                                                                                                                                                         0.00000                                                                                                                               0.00000                                                                                                                                                                           0.00000                                                                                                                          0.00000                                                                                                                                                                 0.76765                                                                                                                                0.00000                                                                                              0.0000                                                                                                                                0.0000                                                                                                                                                                              0.00000                                                                                                                        0.00000                                                                                                                                         0.0                                                                                                                           0.0                                                                                                                                            0.0                                                                                                                           0.0                                                                                                                                            29.54236                                                                        0.00000                                                                                           0.00000                                                                                                                          0.0                                                                                               0.0                                                                                                                       0.0                                                                                                                                        0.0                                                                                                                              0.0                                                                                                                             0.0                                                                                                                                              29.54236                                                                                      0.0                                                                                                               0.0                                                                                                                                                28.04685                                                                                                          28.04685                                                                                                                           0.0                                                                                                                 0.0                                                                                                                                                    1.49551                                                                                                               1.49551                                                                                                                                0.0                                                                                                                    0.0                                                                                                                                     0.00000                                                                        0.00000                                                                                     0.00000                                                                                                             0.00000                                                                                                                              0.00000                                                                                                               0.00000                                                                                                                                0.00000                                                                                                              0.00000                                                                                                                               0.00000                                                                                                             0.00000                                                                                                                              0.00000                                                                                                               0.00000                                                                                                                                0.00000                                                                                                         0.00000                                                                                                                          0.0                                                                                                              0.0                                                                                                                               0.00000                                                                                                               0.0                           0.0                                                   0.0                                                                      0.0                                                                                                0.0                                                                                                               0.0                                                                                                                                           54.29779                   0.15387                               0.15387                                                  0.00000                                                                       0.00000                                                                                         0.00000                                                                                                                        0.0                                                                         0.0                                                                                         0.0                                                                                                                 0.0                                                                                                                                                      0.00000                                                                      0.00000                                                                                       0.0                                                                                                                     0.0                                                                                                                                      0.0                                                                                                                        0.0                                                                                                                                                                  0.0                                                                                                                      0.0                                                                                                                                                              0.00000                                                                                                                0.00000                                                                                                                                 0.0                                                                                                                    0.0                                                                                                                                                          0.0                                                                                                                  0.0                                                                                                                                                      0.0                                                                          0.0                                                                                         0.0                                                                                                               0.0                                                                                                                                                  0.0                                                                                                                            0.0                                                                                                                                                                            0.0                                                                                       0.0                                                                                                                 0.15387                                                                      0.00000                                                                                     0.00000                                                                                                           0.00000                                                                                                                                              0.15387                                                                                       0.00000                                                                                                                  0.00000                                                                                                                                                          0.00000                                                                                                                  0.00000                                                                                                                                                          0.00000                                                                                                                 0.00000                                                                                                                                  0.00000                                                                                                                    0.00000                                                                                                                                                              0.00000                                                                                                                 0.00000                                                                                                                                                        0.00000                                                                                                                    0.00000                                                                                                                                     0.00000                                                                                                                                0.00000                                                                                                                                                                                      0.00000                                                                                                                      0.00000                                                                                                                                                                  0.15387                                                                                                                   0.15387                                                                                                                                                            0.0                                                                                                                         0.0                                                                                                                                                                    0.00000                                                                                                                     0.00000                                                                                                                                                                35.57205                                 35.57205                                                  0.00000                                                                     0.00000                                                                                    0.0000                                                                                                                  0.0000                                                                                                                                   0.0000                                                                                                            0.0000                                                                                                                                                0.0                                                                                                                 0.0                                                                                                                                  0.00000                                                                                                                   0.00000                                                                                                                                                               0.00000                                                                                                             0.00000                                                                                                                                                   0.0000                                                                                                           0.0000                                                                                                                            0.0                                                                                                                      0.0                                                                                                                                       0.0                                                                                                              0.0                                                                                                                               0.0                                                                                                                   0.0                                                                                                                                                           0.0                                                                                                                0.0                                                                                                                                 0.00000                                                                                                             0.00000                                                                                                                                                   0.00000                                                                                             0.00000                                                                                                             0.0                                                                                                                                           0.0                                                                                                                                                            0.0                                                                                                               0.0                                                                                                                                          0.00000                                                                                                              0.0                                                                                                                                             0.0                                                                                                                                                              0.0                                                                                                                                              0.0                                                                                                                                                                                       0.00000                                                                           0.0                                                                                                       0.0                                                                                                                                    0.0                                                                                                                                                     0.0                                                                                                                                            0.0                                                                                                                                                             0.0                                                                                                                                       0.0                                                                                                                                                        0.00000                                                                                             0.00000                                                                                                                       0.00000                                                                                                                                        0.00000                                                                                                   0.00000                                                                                                                                      0.00000                                                                                                                                                       17.70826                                                                    17.70826                                                                                   0.0                                                                                                              0.0                                                                                                                               0.00000                                                                                                           0.00000                                                                                                                            0.09787                                                                                                          0.09787                                                                                                                           0.08875                                                                                                           0.08875                                                                                                                            3.73913                                                                                                           3.73913                                                                                                                                               13.77530                                                                                                          13.77530                                                                                                                                              0.00721                                                                                                              0.00721                                                                                                                               2.95188                                                                      0.00000                                                                                      0.00000                                                                                                             0.00000                                                                                                                              0.14299                                                                                 0.0                                                                                                                  0.0                                                                                                                                   0.00000                                                                                                        0.00000                                                                                                                                            0.14299                                                                                                       0.14299                                                                                                                                          0.00000                                                                                                         0.00000                                                                                                                                              0.10538                                                                                      0.10538                                                                                                                0.10538                                                                                                                                 0.0                                                                                                                       0.50616                                                                                     0.43441                                                                                                          0.43441                                                                                                                           0.07175                                                                                                          0.07175                                                                                                                           0.0                                                                                                                 0.0                                                                                                                                  0.00000                                                                                                               0.00000                                                                                                                                0.46044                                                                               0.06254                                                                                                        0.06254                                                                                                                                              0.00000                                                                                                    0.00000                                                                                                                     0.39790                                                                                                     0.00000                                                                                                0.00000                                                                                                                                       0.00000                                                                                                                                                        0.0                                                                                                                                           0.0                                                                                                                                                            0.00000                                                                                                                                       0.00000                                                                                                                                                        0.00000                                                                                                                                       0.00000                                                                                                                                                        0.0                                                                                                                                               0.0                                                                                                                                                                0.0                                                                                                                                           0.0                                                                                                                                                            0.00000                                                                                                                                       0.00000                                                                                                                                                        0.00000                                                                                                                                       0.00000                                                                                                                                                        0.0                                                                                                                                           0.0                                                                                                                                                            0.00000                                                                                                                                        0.00000                                                                                                                                                         1.73691                                                                                   0.01718                                                                                                        0.01718                                                                                                                         0.00683                                                                                                             0.00683                                                                                                                                                    0.42378                                                                                                              0.42378                                                                                                                               1.28912                                                                                                             0.00628                                                                       0.00628                                                                                        0.00628                                                                                                                      0.11238                                                                            0.11238                                                                                                            0.11238                                                                                                                                      0.11238                                                                                                                                                       0.0                                                                                                                                                             0.00000                                                                                                  0.00000                                                                                                                                     14.79326                                                                     0.00000                                                                                       0.0                                                                                                                        0.0                                                                                                                                         0.00000                                                                                                                     7.41074                                                                                          7.41074                                                                                                                          7.41074                                                                                                                                                                       0.00000                                                                                                                                           0.00000                                                                                                                                           0.0                                                                                                    0.0                                                                                                                                     0.0                                                                                                                                                      3.04795                                                                                      0.0                                                                                                                0.0                                                                                                                                                   0.21424                                                                                                             0.21424                                                                                                                              0.00000                                                                                                               0.00000                                                                                                                                2.82416                                                                                                                      2.82416                                                                                                                                       0.00955                                                                                                                   0.00955                                                                                                                                                             0.00000                                                                                                               0.00000                                                                                                                                                     0.00000                                                                                                                    0.00000                                                                                                                                     4.33457                                                                                         4.33457                                                                                                                         0.00000                                                                                                                      0.00000                                                                                                                                       0.47182                                        0.47182                                                              0.47182                                                                                     0.37902                                                                                                        0.37902                                                                                                                                     0.37902                                                                                                                                                      0.0                                                                                                          0.0                                                                                                                                   0.0                                                                                                                                                    0.0                                                                                                                                 0.0                                                                                                                                                  0.09280                                                                                                                   0.00000                                                                                                                                           0.00000                                                                                                                                                            0.0                                                                                                                                                                0.0                                                                                                                                                                                 0.00000                                                                                                                                                           0.00000                                                                                                                                                                            0.0928                                                                                                                                           0.0928                                                                                                                                                            0.0                                                                                                                                                   0.0                                                                                                                                                                    0.00000                                                                                                   0.00000                                                                                                                            0.00000                                                                                                                                             0.0                                                                                                          0.0                                                                                                                                  0.0                                                                                                                                                   0.0                                                                                                         0.0                                                                                                                                   0.0                                                                                                                                                    0.0                                                                                                                                      18.10005                                    18.10005                                                       17.12619                                                                             0.0                                                                                                                     0.0                                                                                                     0.0                                                                                                                                   0.0                                                                                                                                                    0.0                                                                                                                                  0.0                                                                                                                                                   0.0                                                                                                                               0.0                                                                                                                                                0.0                                                                                                                                     17.12619                                                                                                      17.12619                                                                                                                                             17.12619                                                                                                                                                              0.97386                                                                           0.00000                                                                                        0.00000                                                                                                             0.00000                                                                                                                              0.0                                                                                                                        0.0                                                                                                                                                                 0.0                                                                                                                         0.0                                                                                                                                          0.00000                                                                                          0.00000                                                                                                                      0.05471                                                                                          0.0325                                                                                                                    0.0325                                                                                                                                     0.02221                                                                                                                      0.91915                                                                                          0.00000                                                                                                                 0.00000                                                                                                                                                     0.00000                                                                                                                0.00000                                                                                                                                 0.61584                                                                                                                 0.61584                                                                                                                                                     0.30330                                                                                                                      0.00000                      0.00000                                       0.00000                                                          0.0000                                                                               0.0000                                                                                                0.0                                                                                                                                   0.0                                                                                                                                                                                0.000                                                                                                                            0.000                                                                                                                                                                    0.00000                                                                              0.00000                                                                                                               10.10337                       0.09621                                              0.09621                                                                 0.00000                                                                                           0.00000                                                                                                                     0.00000                                                                                                                                                         0.00000                                                                                                                                                                          0.09621                                                                                     0.09621                                                                                                    0.09621                                                                                                                              0.0                                                                                                                                                   0.09621                                                                                                                                                                     0.00000                                                                                   0.00000                                                                                                     0.00000                                                                                                                                         0.00000                                                                                                                                                          0.00000                                                                                                 0.00000                                                                                                                  0.00000                                                                                                                              0.0                                                                                                                                                   0.00000                                                                                                                                                                        0.00000                                                              0.00000                                                                               0.00000                                                                                            0.0                                                                                                                        0.0                                                                                                                                                             0.00000                                                                                                                      0.00000                                               0.00000                                                                     0.00000                                                                                            0.00000                                                                                                         0.00000                                                                                                                                   0.00000                                                                                                                                  0.00000                                                                                                                                                   0.00000                                                                                                             0.00000                                                                                                                                            0.00000                                                                                                                                                                                        0.0                                                                                                                                        0.0                                                                                                                                                         0.00000                                                 0.00000                                                                      0.00000                                                                                            0.00000                                                                                                             0.0                                                                                                                                         0.0                                                                                                                                                                              0.0                                                                                               0.0                                                                                                               0.0                                                                                                                                      0.0                                                                                                                                                                          10.00717                                              4.93831                                                                0.0                                                                                      0.0                                                                                                   0.0                                                                                                                             4.93831                                                                                       4.93831                                                                                                                           2.64557                                                                    2.64557                                                                                          0.0                                                                                                             0.0                                                                                                                                     0.0                                                                                                                                                                          0.0                                                                                                                                         0.00000                                                                                                          0.0                                                                                                                                        0.0                                                                                                                                                                               0.00000                                                                                                                                  0.00000                                                                                                                                                                       2.16426                                                                                                         2.16426                                                                                                                             2.16426                                                                                                                                                              0.00000                                                                                                                                     0.48131                                                                                                        0.48131                                                                                                                                 0.48131                                                                                                                                                                       0.0                                                                                                                                       0.0                                                                                                             0.0                                                                                                                                          0.0                                                                                                                                                                                    2.42328                                                                 2.42328                                                                                    0.00000                                                                                                       0.00000                                                                                                                                       2.42328                                                                                                   1.71525                                                                                                                                 1.71525                                                                                                                                                                            0.70803                                                                                                                             0.70803                                                                                                                                              3.78389                      3.78389                                      3.78389                                                        0.04284                                                                           0.04284                                                                                          0.0                                                                                                                        0.0                                                                                                                                                               0.04284                                                                                                                      3.74104                                                                           3.74104                                                                                        3.74104                                                                                                                    3.74104                                                                                                                                     0.0                         0.0                                       0.0                                                          0.0                                                                              0.0                                                                                            0.0                                                                                                                  0.0                                                                                                                                                     0.00000                         0.00000                                             0.00000                                                                   0.00000                                                                                          0.00000                                                                                                         0.00000                                                                                                                                    0.00000                                                                                                                                                     0.00000       0.0                               0.0                                                   0.0                                                                       0.0                                                                                           0.0                                                                                                        0.0                                                                                                                            0.0                                                                                                                                             0.0                            0.0                                                    0.0                                                                            0.0                                                                                                  0.0                                                                                                                    0.0                                                                                                                                               0.0                                                                                                                                                                0.0                                          0.0                                                             0.0                                                                                 0.0                                                                                                                  0.0                                          0.0                                                             0.0                                                                                      0.0                                                                                                                            0.0                                                                                                     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                                                                  0.00000                                                                                                                                                    0.00000                                                                                     0.00000                                                                                                                          0.00000                                                                                                          0.0                                                                                                                                                  0.0                                                                                                                                                                   0.0                                                                                                          0.0                                                                                                                                      0.0                                                                                                                                                                               0.0                                                                                                                                        0.0                                                                                                                                                                                 0.0                                                                                                                                     0.0                                                                                                                                                                           0.0                                                                            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                                                                                           0.0                                                                                                                                                  0.0                                                                                                                  0.0                                                                                                                                   0.0                                                                                                                    0.0                                                                                                                                     0.00000                                                                                                                    0.00000                                                                                                                             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                  SRS016944  159450072  l_retroauricular_crease  n        nd   male    usa       Illumina               22699609  nd       nd                      nd           nd           nd             nd                       nd                      nd           nd                                          nd                    nd     nd                nd                   Metaphlan2_Analysis  nd            nd             nd                      nd      nd                 nd                      nd              nd                      nd                        nd                       nd         nd        nd       nd            nd       nd     nd       nd     nd                    nd                  nd             nd                nd           nd          nd                         nd               nd      nd                     nd                      nd                  nd                           nd                     nd                           nd     nd              nd                              nd           nd      nd           nd        nd    nd      nd        nd       nd       nd            nd          nd            nd                    nd                nd        nd                    nd              1             700033377  1         nd     nd      nd            nd              nd   nd          nd                nd             nd        nd             nd              nd         nd          nd                     nd   nd            nd                                                          nd            nd                                nd         nd           nd              nd              nd                   nd               nd                     nd              nd               nd                  nd                     nd         nd                     nd                nd             nd               nd               nd    nd                                    nd              nd    nd   nd                 nd         nd    nd                nd       nd         nd           nd               nd                    nd   nd    nd   nd  nd  nd       nd  nd   nd    nd         nd         nd                        nd         nd             nd                   nd      nd                   nd                   nd                            nd                     nd                       nd                                               nd                                                       nd                                       nd                    nd                  nd                 nd                                                      nd          nd         nd        nd                  nd              nd      nd      nd      nd      nd        nd    nd   nd   nd    nd   nd     nd    nd    nd    nd    nd   nd            nd            nd              nd              nd   nd  nd           nd             nd          nd    nd               nd               nd     nd           nd      nd     nd      nd     nd         nd    nd  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                  MET0184    hv07       skin                     n        nd   male    usa       Illumina               25279917  nd       nd                      nd           nd           nd             nd                       nd                      nd           nd                                          nd                    nd     nd                nd                   Metaphlan2_Analysis  nd            nd             nd                      nd      nd                 nd                      nd              nd                      nd                        nd                       nd         nd        nd       nd            nd       nd     nd       nd     nd                    nd                  nd             nd                nd           nd          nd                         nd               nd      nd                     nd                      nd                  nd                           nd                     nd                           nd     nd              nd      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nd       nd         nd           nd               nd                    nd   nd    nd   nd  nd  nd       nd  nd   nd    nd         nd         hv07_ch_r_u_ss_sebaceous  20s        ch_r           u                    ss      sebaceous            90877494             219                           5559642                67935068                 12353946                                         59074                                                    138428                                   4671080               160256              4831336            0.934024255                                             nd          nd         nd        nd                  nd              nd      nd      nd      nd      nd        nd    nd   nd   nd    nd   nd     nd    nd    nd    nd    nd   nd            nd            nd              nd              nd   nd  nd           nd             nd          nd    nd               nd               nd     nd           nd      nd     nd      nd     nd         nd    nd  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                  MET0185    hv07       skin                     n        nd   male    usa       Illumina               25279917  nd       nd                      nd           nd           nd             nd                       nd                      nd           nd                                          nd                    nd     nd                nd                   Metaphlan2_Analysis  nd            nd             nd                      nd      nd                 nd                      nd              nd                      nd                        nd                       nd         nd        nd       nd            nd       nd     nd       nd     nd                    nd                  nd             nd                nd           nd          nd                         nd               nd      nd                     nd                      nd                  nd                           nd                     nd                           nd     nd              nd      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nd       nd         nd           nd               nd                    nd   nd    nd   nd  nd  nd       nd  nd   nd    nd         nd         hv07_al_r_u_ss_sebaceous  20s        al_r           u                    ss      sebaceous            84871092             200                           4972452                61950752                 14334951                                         47948                                                    113639                                   3310462               140888              3451350            0.737773636                                             nd          nd         nd        nd                  nd              nd      nd      nd      nd      nd        nd    nd   nd   nd    nd   nd     nd    nd    nd    nd    nd   nd            nd            nd              nd              nd   nd  nd           nd             nd          nd    nd               nd               nd     nd           nd      nd     nd      nd     nd         nd    nd  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                  MET0186    hv07       skin                     n        nd   male    usa       Illumina               25279917  nd       nd                      nd           nd           nd             nd                       nd                      nd           nd                                          nd                    nd     nd                nd                   Metaphlan2_Analysis  nd            nd             nd                      nd      nd                 nd                      nd              nd                      nd                        nd                       nd         nd        nd       nd            nd       nd     nd       nd     nd                    nd                  nd             nd                nd           nd          nd                         nd               nd      nd                     nd                      nd                  nd                           nd                     nd                           nd     nd              nd      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                                              1
t2dmeta_short     NOM029     nom029     stool                    n        14   male    china     Illumina               23023125  nd       nd                      nd           nd           nd             nd                       nd                      nd           nd                                          nd                    32.58  nd                nd                   Metaphlan2_Analysis  nd            nd             nd                      nd      nd                 nd                      nd              nd                      nd                        nd                       nd         nd        nd       nd            nd       nd     nd       nd     nd                    nd                  nd             nd                nd           nd          nd                         nd               nd      nd                     nd                      nd                  nd                           nd                     nd                           nd     nd              nd                              nd           nd      nd           nd        nd    nd      nd        nd       nd       nd            nd          nd            nd                    nd                nd        nd                    nd              nd            nd         nd        nd     nd      nd            nd              nd   nd          nd                nd             nd        nd             nd              nd         nd          nd                     nd   nd            nd                                                          nd            nd                                nd         nd           nd              nd              nd                   nd               nd                     nd              nd               nd                  nd                     nd         nd                     nd                nd             nd               nd               nd    nd                                    nd              nd    nd   nd                 nd         nd    nd                stage_i  nd         nd           nd               nd                    nd   nd    nd   nd  nd  nd       nd  nd   nd    nd         nd         nd                        nd         nd             nd                   nd      nd                   nd                   nd                            nd                     nd                       nd                                               nd                                                       nd                                       nd                    nd                  nd                 nd                                                      nd          nd         nd        nd                  nd              nd      nd      176.5   101.5   n         5.81  110  70   15.3  -    5.8    1.34  6.05  1.25  4.21  nd   nd            nd            nd              nd              nd   nd  nd           nd             nd          nd    nd               nd               nd     nd           nd      nd     nd      nd     nd         nd    nd    nd     nd       nd       nd                             nd               nd         nd          nd            nd    nd                           nd     0.00000     0.00000                      0.00000                                         0.00000                                                               0.00000                                                                                      0.00000                                                                                                            0.00000                                                                                                                                          0.00000                                                                                                                                                                                     0.00000                                                                                                                                            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                                                                                                                              24.96927                                                                                                               24.96927                                                                                                                                                    0.00000                                                                                                                    0.00000                                                                                                                                     0.07372                                                                                                                    0.07372                                                                                                                                                             0.00877                                           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                                                                                 0.0                                                                                                                                                                       0.0                                                                                                         0.0                                                                                                                                         0.0                                                                                                                                                                                      0.0                                                                                                                                        0.0                                                                                                                                            0.0                                                                                                                                                                                        0.0                                                                                        0.0                                                                                                         0.0                                                                                                                               0.0                                                                                                                                                                  0.0                                                                                                                                       0.0                                                                                                   0.0                                                                                                                                 0.0                                                                                       0.0                                                                                                       0.0                                                                                                                                   0.0                                                                                                                                                    0.0                                                                                                       0.0                                                                                                                         0.0                                                                                                                                     0.0                                                                                                                                                      0.0                                                                                                                0.0                                                                                                                                              0.0                                                                                                                                                                                         0.0                                                                                                                                         0.0                                                                                                                                                          0.0                                                                                                         0.0                                                                                                                                    0.0                                                                                                                                                                            0.0                                                                                                           0.0                                                                                                                                        0.0                                                                                                         0.0                                                                                                                                  0.0                                                                                                                                                   0.0                                                                                                                0.0                                                                                                                                                  0.0                                                                                                            0.0                                                                                                                                       0.0                                                                                                                                                        0.0                                                                                                                                          0.0                                                                                                                                  0.0                                                                                                                                                   0.0                                                                                                                             0.0                                                                                                                                              0.0                                                                                                            0.0                                                                                                                                      0.0                                                                                                                                                                             0.0                                                                                                                                         0.0                                                                                                             0.0                                                                                                                                        0.0                                                                                                                                                         0.0                                                                    0.0                                                                                      0.0                                                                                                    0.0                                                                                                                        0.0                                                                                                                                         0.0                                                                                                                          0.0                                                                                                                                           0.0                                                                                             0.0                                                                                                                                0.0                                                                                                           0.0                                                                                                                                       0.0                                                                                                              0.0                                                                                                                                             0.0                                                                                                                                      0.0                                                                                                                                                                                 0.0                                                                                                    0.0                                                                                                                              0.0                                                                                                                                                                     0.0                                                                                                      0.0                                                                                                                                  0.0                                                                                                                            0.0                                                                                                                                0.0                                                                                                                                                                       0.0                                                                                                              0.0                                                                                                                                            0.0                                                                                                                                                             0.0                                                                                                                           0.0                                                                                                                                            0.0                                                                                                                                               0.0                                                                                                                             0.0                                                                                                                                                                  0.0                                                                                                      0.0                                                                                                                                0.0                                                                                                                                                 0.0                                                                                                                                         0.0                                                                                                                                                                                    0.0                                                                                                                                           0.0                                                                                                                                                            0.0                                                                       0.0                                                                                             0.0                                                                                                             0.0                                                                                                                                           0.0                                                                                                                                                                                      0.0                                                                     0.0                                                                                         0.0                                                                                                          0.0                                                                                                                                        0.0                                                                                                          0.0                                                                                                                                        0.0                                                                                                                                      0.0                                                                                                                                                                               0.0                                                                                                                        0.0                                                                                                                                         0.0                                                                                                                         0.0                                                                                                                                          0.0                                                                                                                     0.0                                                                                                                                                       0.0                                                                      0.0                                                                                           0.0                                                                                                           0.0                                                                                                                                       0.0                                                                                                                                                        0.0                                                                                                                                        0.0                                                                   0.0                                                                                     0.0                                                                                                 0.0                                                                                                                    0.0                                                                                                                                     0.0                                                                                                          0.0                                                                                                                                            0.0                                                                                                0.0                                                                                                                         0.0                                                                                                                                          0.0                                                                        0.0                                                                                              0.0                                                                                                               0.0                                                                                                                                             0.0                                                                                                                                              0.0                                                                                                                                                                                        0.0                                                                                                                                     0.0                                                                                                                                                                        0.0                                                                                                                                     0.0                                                                                                                                                      0.0                                                                                                                      0.0                                                                                                                                       0.0                                                                                                                            0.0                                                                                                                                                                  0.0                                                                                                                                 0.0                                                                                                                                                  0.0                                                                                                          0.0                                                                                                                                       0.0                                                                                                                                   0.0                                                                                                                                                    0.0                                                                                                                               0.0                                                                                                                                                0.0                                                                                    0.0                                                                                                    0.0                                                                                                                                 0.0                                                                                                         0.0                                                                                                                                 0.0                                                                                                         0.0                                                                                                                               0.0                                                                                                                                                0.0                                                                    0.0                                                                                    0.0                                                                                                     0.0                                                                                                                             0.0                                                                                                                                              0.0                                                                                      0.0                                                                                                                     0.0                                                                                                                              0.0                                                                                                                                               0.0                                                                                                                               0.0                                                                                                                                                0.0                                                                                                                                0.0                                                                                                                                                                      0.0                                                                                                                                      0.0                                                                                                                                                                                 0.0                                                                                                                                                         0.0                                                                                                                              0.0                                                                                                                                                                 0.0                                                                                                                                     0.0                                                                                                                                                      0.0                                                                                                        0.0                                                                                                                                   0.0                                                                                                                                                    0.0                                                                                                                                  0.0                                                                                                                                                   0.0                                                                                                                                        0.0                                                                                                                                                         0.0                                                                                                                                      0.0                                                                                                                                                       0.0                                                                                                        0.0                                                                                                                                   0.0                                                                                                                                    0.0                                                                                                                                                     0.0                                                                                                                                  0.0                                                                                                                                                   0.0                                                                                                                                          0.0                                                                                                                                                           0.0                                                                                                                                    0.0                                                                                                                                                     0.0                                                                                                                                    0.0                                                                                                                                                     0.0                                                                                                                                               0.0                                                                                                                                     0.0                                                                                                                                                                              0.0                                                                                                                                0.0                                                                                                                                                 0.0                                                                                                                                0.0                                                                                                                                                 0.0                                                                                                                                  0.0                                                                                                                                                   0.0                                                                                                                             0.0                                                                                                                                              0.0                                                                                                                                  0.0                                                                                                                                                                        0.0                                                                                                                                     0.0                                                                                                                                                      0.0                                                                                                                                 0.0                                                                                                                                                  0.0                                                                                                                                  0.0                                                                                                                                                   0.0                                                                                                                                                  0.0                                                                                                                                                                                                        0.0                                                                                                                                                                      0.0                                                                                                                                    0.0                                                                                                                                                     0.0                                                                                                                                0.0                                                                                                                                                 0.0                                                                                                                                    0.0                                                                                                                                                     0.0                                                                                                              0.0                                                                                                                                          0.0                                                                                                                                                           0.0                                                                                                           0.0                                                                                                                                         0.0                                                                                                                     0.0                                                                                                                                               0.0                                                                                                                                                                0.0                                                                                                         0.0                                                                                                                              0.0                                                                                                                                                                0.0                                                                                                                                    0.0                                                                                                                                                                            0.0                                                                                                                                 0.0                                                                                                                                                                      0.0                                                                                                                0.0                                                                                                                                                 0.0                                                                                                                        0.0                                                                                                                                         0.0                                            0.0                                                            0.0                                                                             0.0                                                                                            0.0                                                                                                                            0.0                                                                                                                                             0.0                                                                                                               0.0                                                                                                                                0.0                                                         0.0                                                                              0.0                                                                                             0.0                                                                                                                0.0                                                                                                                      0.0                                                                                                                                       0.0                                                                                              0.0                                                                                                                         0.0                                                                                                                                          0.0                                                                              0.0                                                                                              0.0                                                                                                                      0.0                                                                                                                                       0.0                                                                                                                        0.0                                                                                                                                         0.0                                                                                                                0.0                                          0.0                                                        0.0                                                                           0.0                                                                                          0.0                                                                                                                    0.0                                                                                                                                     0.0                                                                                                           0.0                                                                                                      0.0                                                                                                                               0.0                                                                                                                                                0.0                                                                                                      0.0                                                                                                                                   0.0                                                                                                                                                    0.0                                                                                                    0.0                                                                                                                                 0.0                                                                                                                                                  0.0                                                                                  0.0                                                                                              0.0                                                                                                                     0.0                                                                                                                                      0.0                                                                                      0.0                                                                                                    0.0                                                                                                                             0.0                                                                                                                                              0.0                                                                                                       0.0                                                                                                                                    0.0                                            0.0                                                           0.0                                                                          0.0                                                                                      0.0                                                                                                               0.0                                                           0.0                                                                            0.0                                                                                          0.0                                                                                                                 0.0                                                                                                                                  0.0                                               0.0                                                              0.0                                                                              0.0                                                                                                0.0                                                                                                                           0.0                                                                                                                                                                   0.0                                                 0.0                                                                  0.0                                                                                    0.0                                                                                                0.0                                                                                                                   0.0                                                                                                                                    0.0                                                                                                                             0.0                                                                                                                                       0.0                                                                                                                                                                            0.0                                                                                                                                          0.0                                                                                                                                                           0.0                                         0.0                                                           0.0                                                                              0.0                                                                                            0.0                                                                                                                    0.0                                                                                                                                     0.0                                                                                              0.0                                                                                                                           0.0                                                                                                         0.0                                                                                                                                      0.0                                                                                                                                                       0.0                                                                                                                                   0.0                                                                                                                                                    0.0                                                                                                                                          0.0                                                                                         0.0                                                                                                                 0.0                                                                                                                                  0.0                                                                                                                        0.0                                                                                                                                         0.0                                                                                                                    0.0                                                                                                                                     0.0                                                                                                                  0.0                                                                                                                                   0.0                                                                                                                       0.0                                                                                                                                        0.0                                                                                                                                       0.0                                                                                                                       0.0                                                                                                                                        0.0                                                                                                                0.0                                                                                                                                 0.0                                                                                                                                                     0.0                                                                                                                                                                      0.0                                                                                                                                0.0                                                                                              0.0                                                                                                                       0.0                                                                                                                                        0.0                                                                                                                     0.0                                                                                                                                                       0.0                                                                                                                                                                                                      0.0                                                                                                                                                 0.0                                                                                                                                                                  0.0                                                                                                                                     0.0                                                                                                                                                                          0.0                                                                                                                                0.0                                                                                                                                                 0.0                                                                  0.0                                                                                  0.0                                                                                            0.0                                                                                                               0.0                                                                                                                                0.0                                                                                                                                   0.0                                                                                                                                                                          0.0                                                                                                                                0.0                                                                                                                                                                    0.0                                                                                                                0.0                                                                                                                                                 0.0                                                                                                      0.0                                                                                                                               0.0                                                                                                                                                0.0                                                                                                                                  0.0                                                                                                                 0.0                                                                                                                                                      0.0                            0.0                                              0.0                                                                  0.0                                                                                       0.0                                                                                                         0.0                                                                                                                                        0.0                                                                                                                0.0                                                                                                                                                 0.0                                                                                                                                               0.0                                                                                                                    0.0                                                                                                                                     0.0                                                                                                               0.0                                                                                                                                                         0.0                                                                                                               0.0                                                                                                                                                         0.0                                                                                                              0.0                                                                                                                                               0.0                                                                                                                   0.0                                                                                                                                    0.0                                                                                                                    0.0                                                                                                                                     0.0                                                                                          0.0                                                                                                                   0.0                                                                                                                                    0.0                                                                                                                0.0                                                                                                                                                    0.0                                                                                                                       0.0                                                                                                                                        0.0                                                                         0.0                                                                                             0.0                                                                                                                         0.0                                                                                                                                          0.0                                                                                                                                               0.0                                                                                                                         0.0                                                                                                                                            1
Name: count, Length: 3610, dtype: int64
In [55]:
data["sequencing_technology"]
Out[55]:
0       Illumina
1       Illumina
2       Illumina
3       Illumina
4       Illumina
          ...   
3605    Illumina
3606    Illumina
3607    Illumina
3608    Illumina
3609    Illumina
Name: sequencing_technology, Length: 3610, dtype: object
In [57]:
data.sequencing_technology
Out[57]:
0       Illumina
1       Illumina
2       Illumina
3       Illumina
4       Illumina
          ...   
3605    Illumina
3606    Illumina
3607    Illumina
3608    Illumina
3609    Illumina
Name: sequencing_technology, Length: 3610, dtype: object
In [85]:
data["pubmedid"]
Out[85]:
0       25981789
1       25981789
2       25981789
3       25981789
4       25981789
          ...   
3605    25432777
3606    25432777
3607    25432777
3608    25432777
3609    25432777
Name: pubmedid, Length: 3610, dtype: object
In [86]:
data["pubmedid"].value_counts()
Out[86]:
pubmedid
22699609    731
nd          545
25279917    291
24997787    252
22699609    250
23023125    242
23985870    218
25079328    190
23719380    145
24997787    130
23023125    121
20203603    110
25432777    108
23985870     60
25807110     58
23571589     53
25079328     42
25981789     38
25432777     26
Name: count, dtype: int64
In [87]:
data.pubmedid
Out[87]:
0       25981789
1       25981789
2       25981789
3       25981789
4       25981789
          ...   
3605    25432777
3606    25432777
3607    25432777
3608    25432777
3609    25432777
Name: pubmedid, Length: 3610, dtype: object
In [88]:
pubmedid = pd.DataFrame({
    'TechnologyName': ["25981789"],
    'Throughput': [1000],
    'Accuracy': [0.95]
})
In [89]:
sorted_pubmedid = pubmedid.sort_values(by='Throughput', ascending=False)
In [90]:
print(sorted_pubmedid)

  TechnologyName  Throughput  Accuracy
0       25981789        1000      0.95
In [92]:
data["pubmedid"] = data["pubmedid"].astype(str)
data.sort_values(by="pubmedid", inplace=True)
In [93]:
data.sort_values(by="pubmedid")
Out[93]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1866 metahit MH0074 mh0074 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1842 metahit MH0050 mh0050 stool n 49 male denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1841 metahit MH0049 mh0049 stool n 44 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1818 metahit MH0024 mh0024 stool n 59 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1819 metahit MH0025 mh0025 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
2358 Psoriasis_2014 Steph_b2_64 19 gomito_dx y 32 male italy Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2357 Psoriasis_2014 Steph_b2_63 19 gomito_sx y 32 male italy Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2356 Psoriasis_2014 Steph_b2_62 19 solco_retroauricolare_dx n 32 male italy Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2362 Psoriasis_2014 Steph_b2_68 20 gomito_dx y 49 male italy Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
581 doyle_bt2 G46978 10151 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3513 columns

Method Chaining in Pandas¶

In [94]:
data["pubmedid"]
Out[94]:
1866    20203603
1895    20203603
1894    20203603
1893    20203603
1892    20203603
          ...   
622           nd
621           nd
620           nd
626           nd
581           nd
Name: pubmedid, Length: 3610, dtype: object
In [95]:
data["pubmedid"].value_counts()
Out[95]:
pubmedid
22699609    981
nd          545
24997787    382
23023125    363
25279917    291
23985870    278
25079328    232
23719380    145
25432777    134
20203603    110
25807110     58
23571589     53
25981789     38
Name: count, dtype: int64
In [96]:
data["pubmedid"].value_counts().sort_index()
Out[96]:
pubmedid
20203603    110
22699609    981
23023125    363
23571589     53
23719380    145
23985870    278
24997787    382
25079328    232
25279917    291
25432777    134
25807110     58
25981789     38
nd          545
Name: count, dtype: int64
In [97]:
data["pubmedid"].sort_index()
Out[97]:
0       25981789
1       25981789
2       25981789
3       25981789
4       25981789
          ...   
3605    25432777
3606    25432777
3607    25432777
3608    25432777
3609    25432777
Name: pubmedid, Length: 3610, dtype: object
In [98]:
data["pubmedid"].sort_index().value_counts()
Out[98]:
pubmedid
22699609    981
nd          545
24997787    382
23023125    363
25279917    291
23985870    278
25079328    232
23719380    145
25432777    134
20203603    110
25807110     58
23571589     53
25981789     38
Name: count, dtype: int64
In [99]:
data["pubmedid"].value_counts().sort_index().plot.bar()
Out[99]:
<Axes: xlabel='pubmedid'>
No description has been provided for this image

loc[ ] and iloc [ ]¶

In [100]:
data
Out[100]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1866 metahit MH0074 mh0074 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1895 metahit V1_CD_12 v1_cd_12 stool ibd_crohn_disease 41 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1894 metahit V1_CD_11 v1_cd_11 stool n 62 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1893 metahit O2_UC_4 o2_uc_4 stool ibd_ulcerative_colitis 57 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1892 metahit O2_UC_24 o2_uc_24 stool ibd_ulcerative_colitis 55 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
622 doyle_bt2 G51224 12311 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
621 doyle_bt2 G51223 12271 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
620 doyle_bt2 G51222 12221 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
626 doyle_bt2 G51228 12351 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
581 doyle_bt2 G46978 10151 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3513 columns

In [101]:
data.iloc[4]
Out[101]:
dataset_name                                                                                                                                                       metahit
sampleID                                                                                                                                                          O2_UC_24
subjectID                                                                                                                                                         o2_uc_24
bodysite                                                                                                                                                             stool
disease                                                                                                                                             ibd_ulcerative_colitis
                                                                                                                                                             ...          
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis                                             0.0
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085                            0.0
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855                       0.0
k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1                                             0.0
k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965                            0.0
Name: 1892, Length: 3513, dtype: object
In [102]:
data.iloc[:5]
Out[102]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1866 metahit MH0074 mh0074 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1895 metahit V1_CD_12 v1_cd_12 stool ibd_crohn_disease 41 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1894 metahit V1_CD_11 v1_cd_11 stool n 62 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1893 metahit O2_UC_4 o2_uc_4 stool ibd_ulcerative_colitis 57 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1892 metahit O2_UC_24 o2_uc_24 stool ibd_ulcerative_colitis 55 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

5 rows × 3513 columns

In [103]:
#[start:stop:step]
data.iloc[1:10]
Out[103]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1895 metahit V1_CD_12 v1_cd_12 stool ibd_crohn_disease 41 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1894 metahit V1_CD_11 v1_cd_11 stool n 62 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1893 metahit O2_UC_4 o2_uc_4 stool ibd_ulcerative_colitis 57 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1892 metahit O2_UC_24 o2_uc_24 stool ibd_ulcerative_colitis 55 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1891 metahit O2_UC_23 o2_uc_23 stool ibd_ulcerative_colitis 44 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1890 metahit O2_UC_22 o2_uc_22 stool ibd_ulcerative_colitis 44 male spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1889 metahit O2_UC_21 o2_uc_21 stool ibd_ulcerative_colitis 49 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1888 metahit O2_UC_20 o2_uc_20 stool ibd_ulcerative_colitis 51 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1887 metahit O2_UC_1 o2_uc_1 stool ibd_ulcerative_colitis 37 male spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

9 rows × 3513 columns

In [104]:
data.iloc[1:10:2]
Out[104]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1895 metahit V1_CD_12 v1_cd_12 stool ibd_crohn_disease 41 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1893 metahit O2_UC_4 o2_uc_4 stool ibd_ulcerative_colitis 57 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1891 metahit O2_UC_23 o2_uc_23 stool ibd_ulcerative_colitis 44 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1889 metahit O2_UC_21 o2_uc_21 stool ibd_ulcerative_colitis 49 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1887 metahit O2_UC_1 o2_uc_1 stool ibd_ulcerative_colitis 37 male spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

5 rows × 3513 columns

In [105]:
data.iloc[1:10:3]
Out[105]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1895 metahit V1_CD_12 v1_cd_12 stool ibd_crohn_disease 41 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1892 metahit O2_UC_24 o2_uc_24 stool ibd_ulcerative_colitis 55 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1889 metahit O2_UC_21 o2_uc_21 stool ibd_ulcerative_colitis 49 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3 rows × 3513 columns

In [106]:
data.iloc[1:]
Out[106]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1895 metahit V1_CD_12 v1_cd_12 stool ibd_crohn_disease 41 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1894 metahit V1_CD_11 v1_cd_11 stool n 62 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1893 metahit O2_UC_4 o2_uc_4 stool ibd_ulcerative_colitis 57 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1892 metahit O2_UC_24 o2_uc_24 stool ibd_ulcerative_colitis 55 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1891 metahit O2_UC_23 o2_uc_23 stool ibd_ulcerative_colitis 44 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
622 doyle_bt2 G51224 12311 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
621 doyle_bt2 G51223 12271 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
620 doyle_bt2 G51222 12221 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
626 doyle_bt2 G51228 12351 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
581 doyle_bt2 G46978 10151 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3609 rows × 3513 columns

In [107]:
data.iloc[-10:]
Out[107]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
550 doyle_bt2 G46934 10581 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
627 doyle_bt2 G51229 12351 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
625 doyle_bt2 G51227 12321 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
624 doyle_bt2 G51226 12511 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
623 doyle_bt2 G51225 12431 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
622 doyle_bt2 G51224 12311 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
621 doyle_bt2 G51223 12271 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
620 doyle_bt2 G51222 12221 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
626 doyle_bt2 G51228 12351 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
581 doyle_bt2 G46978 10151 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

10 rows × 3513 columns

In [108]:
#[start:stop:step]
data.iloc[:,2:6]
Out[108]:
subjectID bodysite disease age
1866 mh0074 stool n 49
1895 v1_cd_12 stool ibd_crohn_disease 41
1894 v1_cd_11 stool n 62
1893 o2_uc_4 stool ibd_ulcerative_colitis 57
1892 o2_uc_24 stool ibd_ulcerative_colitis 55
... ... ... ... ...
622 12311 nd nd nd
621 12271 nd nd nd
620 12221 nd nd nd
626 12351 nd nd nd
581 10151 nd nd nd

3610 rows × 4 columns

In [109]:
data.iloc[3:10,5:-2]
Out[109]:
age gender country sequencing_technology pubmedid camp paired_end_insert_size read_length total_reads matched_reads ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Bavariicoccus|s__Bavariicoccus_seileri|t__GCF_000421665 k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855
1893 57 female spain Illumina 20203603 nd nd nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1892 55 female spain Illumina 20203603 nd nd nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1891 44 female spain Illumina 20203603 nd nd nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1890 44 male spain Illumina 20203603 nd nd nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1889 49 female spain Illumina 20203603 nd nd nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1888 51 female spain Illumina 20203603 nd nd nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1887 37 male spain Illumina 20203603 nd nd nd nd nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

7 rows × 3506 columns

In [110]:
data.iloc[:1000]
Out[110]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1866 metahit MH0074 mh0074 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1895 metahit V1_CD_12 v1_cd_12 stool ibd_crohn_disease 41 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1894 metahit V1_CD_11 v1_cd_11 stool n 62 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1893 metahit O2_UC_4 o2_uc_4 stool ibd_ulcerative_colitis 57 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1892 metahit O2_UC_24 o2_uc_24 stool ibd_ulcerative_colitis 55 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
1512 hmp SRS064774 764062976 tongue_dorsum n nd female usa Illumina 22699609 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1511 hmp SRS064704 809635352 posterior_fornix n nd female usa Illumina 22699609 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1510 hmp SRS064645 686765762 stool n nd male usa Illumina 22699609 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1509 hmp SRS064557 764042746 stool n nd female usa Illumina 22699609 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1519 hmp SRS065310 764042746 supragingival_plaque n nd female usa Illumina 22699609 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

1000 rows × 3513 columns

In [111]:
data.loc[:1000, "subjectID"]
Out[111]:
1866       mh0074
1895     v1_cd_12
1894     v1_cd_11
1893      o2_uc_4
1892     o2_uc_24
          ...    
996     159632143
997     159632143
998     159672603
999     159753524
1000    159753524
Name: subjectID, Length: 544, dtype: object
In [112]:
data.loc[:100,["subjectID", "sampleID", "country"]]
Out[112]:
subjectID sampleID country
1866 mh0074 MH0074 denmark
1895 v1_cd_12 V1_CD_12 spain
1894 v1_cd_11 V1_CD_11 spain
1893 o2_uc_4 O2_UC_4 spain
1892 o2_uc_24 O2_UC_24 spain
... ... ... ...
104 mh0082 MH0082 denmark
103 mh0081 MH0081 denmark
102 mh0080 MH0080 denmark
101 mh0079 MH0079 denmark
100 mh0078 MH0078 denmark

1808 rows × 3 columns

In [113]:
data.loc[100,"sampleID"]
Out[113]:
'MH0078'
In [114]:
# Change/ update a value in a dataframe
data.loc[100,"sampleID"]=3.83
In [115]:
data.loc[100,"sampleID"]
Out[115]:
3.83

Filter with conditional logic using loc [ ]¶

In [128]:
for i in data [["subjectID", "sampleID", "country","pubmedid","age","bodysite","subjectID","sampleID"]]:
    print(i.upper())
    print(data[i].unique())
    print()

SUBJECTID
['mh0074' 'v1_cd_12' 'v1_cd_11' ... 12021 10581 10151]

SAMPLEID
['MH0074' 'V1_CD_12' 'V1_CD_11' ... 'G51222' 'G51228' 'G46978']

COUNTRY
['denmark' 'spain' 'usa' 'nd' 'china' ' -' 'germany' 'sweden' 'france'
 'yugoslavia' 'norway' 'hungary' 'estonia' 'finland' 'iceland' 'slovakia'
 'peru' 'italy' 'tanzania']

PUBMEDID
['20203603' '22699609' '23023125' '23571589' '23719380' '23985870'
 '24997787' '25079328' '25279917' '25432777' '25807110' '25981789' 'nd']

AGE
['49' '41' '62' '57' '55' '44' '51' '37' '42' '48' '56' '47' '31' '68'
 '43' '34' '59' '64' '54' '25' '69' '0' '32' '22' '19' '38' '53' '45' '36'
 '46' '18' '63' '67' '58' 'nd' '61' '60' '52' '50' '35' '27' '29' '21'
 '39' '28' '40' '26' ' -' '70' '74' '75' '79' '65' '71' '30' '72' '81'
 '13' '80' '33' '23' '14' '24' '73' '66' '83' '86' '71.1' '70.07' '70.02'
 '69.27' '69.48' '70.01' '69.89' '70.15' '70.05' '69.49' '69.79' '69.53'
 '70.24' '70.34' '68.98' '69.42' '70.7' '69.92' '69.7' '71.65' '71.63'
 '69.15' '71.26' '71.84' '71.53' '69.74' '71.44' '71.25' '70.47' '71.4'
 '71.45' '69.67' '70.33' '71.17' '70.06' '70.21' '70.85' '70.25' '71.12'
 '70.16' '70.57' '70.46' '70.91' '70.56' '70.67' '69.32' '70.96' '69.54'
 '70.27' '69.78' '69.91' '69.18' '69.03' '69.43' '69.87' '69.36' '70.43'
 '70.03' '69.98' '70.31' '71.28' '69.41' '71.71' '70.11' '71.01' '70.55'
 '71.11' '68.96' '70.42' '71.02' '70.97' '70.14' '70.39' '69.02' '70.72'
 '70.2' '71.24' '69.06' '71.16' '70.22' '69.47' '70.12' '71.21' '69.97'
 '71.36' '71.38' '70.9' '70.52' '71.31' '70.78' '70.59' '71.47' '70.68'
 '69.88' '71.03' '71.29' '70.86' '70.63' '70.71' '70.23' '70.08' '71.49'
 '71.39' '69.08' '71.57' '71.58' '71.04' '70.45' '70.19' '69.58' '70.35'
 '70.84' 'na' '20' 48 62 64 51 55 38 59 61 36 60 53 44 66 56 54 46 45 41
 47 43 73 70 32 35 49 27 30 34 52 37 58 39 18 74 72 69 42 '78' '76' 29 71
 50 40 33 57 63 25 31 26 23 '77' 65 78 84 79 85 68 '87' '89' '10' '5' '4'
 '3' '9' '2' '7' '6' '12' '1' '8' '16' '17' '15' 67]

BODYSITE
['stool' 'tongue_dorsum' 'posterior_fornix' 'supragingival_plaque'
 'buccal_mucosa' 'mid_vagina' 'vaginal_introitus' 'subgingival_plaque'
 'throat' 'palatine_tonsils' 'saliva' 'anterior_nares'
 'keratinized_gingiva' 'r_retroauricular_crease' 'l_retroauricular_crease'
 'hard_palate' 'skin' 'gomito_sx' 'nd' 'gomito_dx'
 'solco_retroauricolare_sx' 'solco_retroauricolare_dx' 'milk'
 'infant_faeces' 'mother_faeces']

SUBJECTID
['mh0074' 'v1_cd_12' 'v1_cd_11' ... 12021 10581 10151]

SAMPLEID
['MH0074' 'V1_CD_12' 'V1_CD_11' ... 'G51222' 'G51228' 'G46978']
In [129]:
print(data.columns)

Index(['dataset_name', 'sampleID', 'subjectID', 'bodysite', 'disease', 'age',
       'gender', 'country', 'sequencing_technology', 'pubmedid',
       ...
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified',
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis',
       'k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085',
       'k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855',
       'k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1',
       'k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965'],
      dtype='object', length=3513)
In [132]:
MH0074 = data["sampleID"] == "MH0074"
In [133]:
MH0074
Out[133]:
1866     True
1895    False
1894    False
1893    False
1892    False
        ...  
622     False
621     False
620     False
626     False
581     False
Name: sampleID, Length: 3610, dtype: bool
In [134]:
MH0074.value_counts()
Out[134]:
sampleID
False    3607
True        3
Name: count, dtype: int64
In [135]:
data.loc[MH0074]
Out[135]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1866 metahit MH0074 mh0074 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
96 Chatelier_gut_obesity MH0074 mh0074 stool leaness nd - denmark Illumina 23985870 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1976 Neilsen_genome_assembly MH0074 mh0074 stool n 49 female denmark Illumina 24997787 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3 rows × 3513 columns

In [137]:
data.loc[data["sampleID"] == "G51222"]
Out[137]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
620 doyle_bt2 G51222 12221 nd nd nd nd usa Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

1 rows × 3513 columns

In [141]:
data["sampleID"] = pd.to_numeric(data["sampleID"], errors="coerce").fillna(-1)
data["subjectID"] = pd.to_numeric(data["subjectID"], errors="coerce").fillna(-1)
result = data.loc[data["sampleID"] > data["subjectID"]]
In [142]:
result
Out[142]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
100 Chatelier_gut_obesity 3.83 -1.0 stool obesity nd - denmark Illumina 23985870 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

1 rows × 3513 columns

In [145]:
data.loc[data["sampleID"] >data["subjectID"],"dataset_name"]
Out[145]:
100    Chatelier_gut_obesity
Name: dataset_name, dtype: object
In [149]:
data.loc[(data["pubmedid"] == "20203603") & (data["age"] == "49")]
Out[149]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1866 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1889 metahit -1.0 -1.0 stool ibd_ulcerative_colitis 49 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1873 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1900 metahit -1.0 -1.0 stool n 49 male spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1869 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1834 metahit -1.0 -1.0 stool n 49 male denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1827 metahit -1.0 -1.0 stool n 49 male denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1820 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1819 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1842 metahit -1.0 -1.0 stool n 49 male denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1844 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1815 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1862 metahit -1.0 -1.0 stool n 49 male denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1870 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1854 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1846 metahit -1.0 -1.0 stool n 49 male denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1845 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1817 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

18 rows × 3513 columns

In [150]:
# Both statement need to evaluate to true
data.loc[(data["pubmedid"] == "20203603") & (data["age"] == "49")].sort_values(by= "gender", ascending=False)
Out[150]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1842 metahit -1.0 -1.0 stool n 49 male denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1900 metahit -1.0 -1.0 stool n 49 male spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1846 metahit -1.0 -1.0 stool n 49 male denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1834 metahit -1.0 -1.0 stool n 49 male denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1827 metahit -1.0 -1.0 stool n 49 male denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1862 metahit -1.0 -1.0 stool n 49 male denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1815 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1845 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1854 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1870 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1866 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1844 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1889 metahit -1.0 -1.0 stool ibd_ulcerative_colitis 49 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1819 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1820 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1869 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1873 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1817 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

18 rows × 3513 columns

In [151]:
rpg = data["age"] == "49"
In [152]:
data.loc[20203603 & rpg]
Out[152]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1866 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1889 metahit -1.0 -1.0 stool ibd_ulcerative_colitis 49 female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1873 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1900 metahit -1.0 -1.0 stool n 49 male spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1869 metahit -1.0 -1.0 stool n 49 female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
2042 Neilsen_genome_assembly -1.0 -1.0 stool n 49 female denmark Illumina 24997787 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2044 Neilsen_genome_assembly -1.0 -1.0 stool n 49 female denmark Illumina 24997787 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2590 Quin_gut_liver_cirrhosis -1.0 -1.0 stool cirrhosis 49 female china Illumina 25079328 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3583 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma 49 male france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3564 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n 49 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

62 rows × 3513 columns

In [154]:
mask = data["age"] == "49"
In [155]:
filtered_data = data[mask]
In [158]:
filtered_data = data[data["age"] == "49"]
In [159]:
data["age"] = "49"
In [161]:
condition = data["age"].isin(["49", "57"])
filtered_data = data[condition]
In [162]:
data.loc[condition, "age"] = "NewValue"
In [163]:
# isin()
top_3_country = data.country.isin(["denmark", "france","spain"])
In [164]:
data.loc[top_3_country]
Out[164]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1866 metahit -1.0 -1.0 stool n NewValue female denmark Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1895 metahit -1.0 -1.0 stool ibd_crohn_disease NewValue female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1894 metahit -1.0 -1.0 stool n NewValue female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1893 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NewValue female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1892 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NewValue female spain Illumina 20203603 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3536 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NewValue female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3521 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NewValue male france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3561 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NewValue female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NewValue female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NewValue male france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

907 rows × 3513 columns

In [166]:
data["pubmedid"] = pd.to_numeric(data["pubmedid"], errors="coerce")
countr_2M = data[(data["country"].isin(["spain", "denmark", "france"])) & (data["pubmedid"] >= 2)]
In [179]:
country = data.country.isin(["denmark", "spain", "france"])
country_2M = data["pubmedid"] >= 2
In [181]:
data.loc[country & top_3_country & country_2M]
Out[181]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1866 metahit -1.0 -1.0 stool n NewValue female denmark Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1895 metahit -1.0 -1.0 stool ibd_crohn_disease NewValue female spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1894 metahit -1.0 -1.0 stool n NewValue female spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1893 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NewValue female spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1892 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NewValue female spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3536 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NewValue female france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3521 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NewValue male france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3561 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NewValue female france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NewValue female france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NewValue male france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

907 rows × 3513 columns

In [190]:
data.loc[-data["country"].isin(["denmark", "spain", "france"])]
Out[190]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
841 hmp -1.0 763435843.0 tongue_dorsum n NaN NaN usa Illumina 22699609.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
916 hmp -1.0 764143897.0 tongue_dorsum n NaN NaN usa Illumina 22699609.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
915 hmp -1.0 763759525.0 stool n NaN NaN usa Illumina 22699609.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
914 hmp -1.0 763759525.0 tongue_dorsum n NaN NaN usa Illumina 22699609.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
913 hmp -1.0 763759525.0 posterior_fornix n NaN NaN usa Illumina 22699609.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
622 doyle_bt2 -1.0 12311.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
621 doyle_bt2 -1.0 12271.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
620 doyle_bt2 -1.0 12221.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
626 doyle_bt2 -1.0 12351.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
581 doyle_bt2 -1.0 10151.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

2703 rows × 3513 columns

Most Useful Methods for Data Analysis¶

In [193]:
# query()

data.query("sampleID < subjectID")
Out[193]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
841 hmp -1.0 763435843.0 tongue_dorsum n NaN NaN usa Illumina 22699609.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
916 hmp -1.0 764143897.0 tongue_dorsum n NaN NaN usa Illumina 22699609.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
915 hmp -1.0 763759525.0 stool n NaN NaN usa Illumina 22699609.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
914 hmp -1.0 763759525.0 tongue_dorsum n NaN NaN usa Illumina 22699609.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
913 hmp -1.0 763759525.0 posterior_fornix n NaN NaN usa Illumina 22699609.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
622 doyle_bt2 -1.0 12311.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
621 doyle_bt2 -1.0 12271.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
620 doyle_bt2 -1.0 12221.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
626 doyle_bt2 -1.0 12351.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
581 doyle_bt2 -1.0 10151.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

1509 rows × 3513 columns

In [194]:
data.query("country == 'france' and age > 49")
Out[194]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965

0 rows × 3513 columns

In [195]:
france = data.query("country == 'france'")
In [196]:
france
Out[196]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
3343 WT2D -1.0 -1.0 stool n NaN NaN france Illumina 23719380.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3484 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3483 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3482 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3481 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3536 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3521 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3561 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

135 rows × 3513 columns

In [197]:
# unique() and nunique()

data.country.unique()
Out[197]:
array(['denmark', 'spain', 'usa', 'nd', 'china', ' -', 'germany',
       'sweden', 'france', 'yugoslavia', 'norway', 'hungary', 'estonia',
       'finland', 'iceland', 'slovakia', 'peru', 'italy', 'tanzania'],
      dtype=object)
In [198]:
data.country.nunique()
Out[198]:
19
In [199]:
data.nunique()
Out[199]:
dataset_name                                                                                                                                         18
sampleID                                                                                                                                              2
subjectID                                                                                                                                           322
bodysite                                                                                                                                             25
disease                                                                                                                                              20
                                                                                                                                                   ... 
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis                            2
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085           2
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855      2
k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1                            2
k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965           2
Length: 3513, dtype: int64
In [200]:
data["pubmedid"].nunique()
Out[200]:
12
In [201]:
for i in data.select_dtypes("object"):
    print(data[i].unique())

['metahit' 'hmp' 'hmpii' 't2dmeta_long' 't2dmeta_short'
 'Loman2013_EcoliOutbreak_DNA_HiSeq' 'Loman2013_EcoliOutbreak_DNA_MiSeq'
 'WT2D' 'Chatelier_gut_obesity' 'Neilsen_genome_assembly'
 'Quin_gut_liver_cirrhosis' 'Segre_Human_Skin'
 'Zeller_fecal_colorectal_cancer' 'Tito_subsistence_gut' 'Candela_Africa'
 'Psoriasis_2014' 'doyle_bt2' 'VerticalTransmissionPilot']
['stool' 'tongue_dorsum' 'posterior_fornix' 'supragingival_plaque'
 'buccal_mucosa' 'mid_vagina' 'vaginal_introitus' 'subgingival_plaque'
 'throat' 'palatine_tonsils' 'saliva' 'anterior_nares'
 'keratinized_gingiva' 'r_retroauricular_crease' 'l_retroauricular_crease'
 'hard_palate' 'skin' 'gomito_sx' 'nd' 'gomito_dx'
 'solco_retroauricolare_sx' 'solco_retroauricolare_dx' 'milk'
 'infant_faeces' 'mother_faeces']
['n' 'ibd_crohn_disease' 'ibd_ulcerative_colitis' ' -' 't2d'
 'stec2-positive' 'impaired_glucose_tolerance' 'obesity' 'leaness'
 'n_relative' 'cirrhosis' 'small_adenoma' 'cancer' 'large_adenoma'
 'overweight' 'obese' '-' 'underweight' 'y' 'nd']
['denmark' 'spain' 'usa' 'nd' 'china' ' -' 'germany' 'sweden' 'france'
 'yugoslavia' 'norway' 'hungary' 'estonia' 'finland' 'iceland' 'slovakia'
 'peru' 'italy' 'tanzania']
['Illumina']
['nd' 'bologna' 'dedauko' 'sengele']
['nd' '350' '358' '352' '397' '387' '346' '359' '351' '356' '360' '341'
 '331' '349' '321' '325' '339' '348' '361' '357' '336' '329' '344' '338'
 '347' '335' '353' '342' '355' '345' '328' '327' '332' '137/388' '137/363'
 '152/430' '145/366' '135/369' '147/429' '144/420' '147/435' '142/375'
 '144/357' '134/362' '142/367' '136/370' '145/369' '140/379' '135/368'
 '141/371' '137/412' '139/373' '136/382' '337' '343' '354' '146/432'
 '136/379' '142/394' '140/365' '134/359' '128/365' '140/376' '135/360'
 '146/373' '135/377' '134/409' '133/378' '333' '137/401' '141/367'
 '142/354' '138/368' '156/398' '146/356' '124/353' '134/354' '148/375'
 '136/381' '131/374' '134/378' '146/368' '233' '139/370' '143/357'
 '141/390' '137/416' '142/370' '147/373' '143/374' '141/339' '143/349'
 '136/378' '140/372' '130/380' '139/383' '148/377' '143/366' '141/364'
 '136/373' '144/370' '144/372' '145/377' '142/368' '138/355' '141/416'
 '340' '134/343']
['nd' '90' '75' '44/75']
['nd' '88973624' '103705384' '89250392' '73553162' '97854620' '77164104'
 '92940546' '117873014' '92747932' '75873186' '100321828' '92188930'
 '117066734' '107338874' '104778334' '100315068' '117735108' '86385716'
 '89611704' '72051324' '88723696' '107825622' '87272504' '94435574'
 '76108014' '107367954' '93420656' '115683988' '93178044' '95313804'
 '95332652' '75367948' '102848186' '103827288' '90882994' '76670250'
 '56533614' '55141002' '58240556' '52914788' '60425092' '71831300'
 '70427028' '70759866' '67012594' '67997802' '70338286' '66595596'
 '57592966' '62261122' '64804260' '58869090' '67588262' '59204228'
 '59979754' '61160430' '59978710' '59394708' '59954722' '63363190'
 '59291100' '59372568' '62436508' '55119888' '61669500' '60898546'
 '55011540' '61291372' '58109206' '55503418' '60358690' '56779510'
 '52676404' '61219810' '55066474' '61923532' '99289284' '61157996'
 '59466402' '66357610' '59658146' '69823068' '74372028' '76565854'
 '67762098' '73808044' '74388704' '67283592' '71018904' '76050120'
 '83663740' '88854390' '95619960' '93076782' '96817078' '106852124'
 '64217132' '54546370' '61901204' '65331138' '59688950' '58429724'
 '59409144' '58836624' '56395546' '66564212' '68547286' '61347790'
 '59646896' '63093720' '55584816' '58559028' '59111322' '61639412'
 '69993022' '66181294' '66887276' '65626772' '63102046' '63513832'
 '75586080' '88148550' '46234872' '47913662' '69711626' '43864016'
 '44483444' '36112910' '44573964' '49276126' '44727782' '36512292'
 '44444004' '41109952' '41014368' '49812516' '43046732' '49134840'
 '45957518' '47108026' '47228584' '47063604' '62462910' '55336872'
 '58781294' '63915880' '63207452' '55430592' '49432344' '46028996'
 '53561048' '48342310' '47850158' '46584102' '27414950' '26012006'
 '49649746' '30642366' '47902174' '83848974' '42258418' '28572586'
 '51598890' '55147450' '37481422' '55597758' '54906872' '26254116'
 '45794576' '55512226' '54391486' '186050798' '58492736' '58446132'
 '161145974' '46564054' '71564400' '50381662' '56295656' '43280824'
 '50094084' '37399690' '25954644' '47789610' '26967604' '26929148'
 '35794106' '49429392' '44861872' '44993368' '49336750' '44369418'
 '44247598' '42715114' '45459094' '42030812' '47700842' '49255994'
 '43406328' '58782054' '30653092' '55253594' '101560248' '85828048'
 '88583124' '79482320' '82395456' '79036038' '92673880' '91294522'
 '92421696' '99861330' '64860322' '64825116' '89069102' '91767488'
 '84668092' '88543770' '91695516' '80011728' '77472300' '88681082'
 '90135120' '89840238' '68315370' '80140744' '87625872' '80453800'
 '94429580' '85952788' '93457578' '96057212' '84908988' '81239906'
 '93478090' '87068936' '80848150' '92775624' '106319324' '98884974'
 '98666990' '87603926' '104533724' '66082082' '65783028' '65205682'
 '81706032' '63784510' '77929132' '63505154' '58830590' '58483976'
 '71308972' '102315606' '59039162' '75593728' '57085690' '66517084'
 '95130010' '88114284' '80721308' '98098766' '96794646' '96413258'
 '90292896' '98897552' '98712780' '92037010' '117074346' '97466924'
 '90147200' '91964818' '85941302' '99801936' '86737890' '89107084'
 '109244906' '98064204']
['nd' '52432339' '65212399' '58839326' '44089240' '56843466' '49445375'
 '50892149' '84170799' '55062536' '44048200' '64298940' '57914571'
 '77400974' '49726108' '71804169' '66108121' '77709043' '56559431'
 '57105029' '46588501' '54470599' '71487929' '53471468' '59977572'
 '44413592' '59357170' '51631056' '76245014' '57148029' '49982378'
 '51721476' '44882489' '64127856' '65064475' '54484742' '42593480'
 '37590772' '33748128' '39156750' '33345239' '35449545' '51547549'
 '46515712' '44007575' '42785899' '34420391' '44283514' '36722581'
 '38879451' '41547960' '43986716' '27958806' '45242994' '39406098'
 '33353629' '33365790' '35775667' '35958087' '33509448' '40159479'
 '30647501' '33184980' '39213229' '35062338' '43562678' '30068196'
 '32312099' '41674669' '37733823' '30986368' '36729432' '26641788'
 '33604537' '38532869' '32252547' '38429502' '55890959' '33230044'
 '36357417' '38982359' '38136732' '34274419' '51205937' '50708060'
 '47648901' '51623325' '55122506' '41610581' '30738070' '47209171'
 '54301752' '56327283' '58520427' '49165231' '56806507' '71858868'
 '40992850' '33927581' '40061053' '32692022' '37062082' '29193199'
 '32562341' '29799052' '34018647' '41344400' '48878791' '29385959'
 '32722943' '38671734' '37146994' '36773299' '34668973' '41181077'
 '47452117' '36500770' '39108531' '38039657' '38851157' '32960034'
 '49834758' '59137011' '26698327' '29953272' '37744542' '30740858'
 '29921009' '21013732' '25901730' '30777404' '28747521' '22534140'
 '28436493' '24793213' '25152129' '30728060' '24947987' '20866306'
 '27080758' '28590673' '30887479' '30077861' '40701355' '30918814'
 '38113339' '35612836' '45334212' '36197604' '33196196' '30321935'
 '32034853' '31632240' '30898703' '30041718' '16300813' '16202446'
 '30428969' '20595823' '31214554' '53616239' '27105569' '16989834'
 '29166431' '32647916' '22774128' '31537806' '31221414' '17500129'
 '31549175' '29428703' '37727519' '122587818' '34218208' '34215593'
 '112203684' '28295708' '46371198' '31800850' '36760744' '25774779'
 '28885674' '20377498' '15610387' '29652469' '15801670' '14251095'
 '20444601' '33427397' '29481746' '27637761' '30568749' '29385709'
 '26951462' '26393304' '24842010' '23788617' '29878062' '31343379'
 '23888156' '37304900' '20662163' '34279893' '60044211' '57784005'
 '54276809' '47957299' '52994193' '52363942' '63932024' '59975144'
 '51850506' '54496803' '40201548' '35019882' '53033356' '60772235'
 '41710612' '56659201' '57182866' '39722236' '46329169' '46155324'
 '58798961' '58195818' '44848705' '43431617' '56652040' '44452953'
 '58829645' '52527315' '46993970' '61035324' '51986995' '53861434'
 '59373727' '55134025' '48534087' '55548888' '69119952' '59452178'
 '51919111' '60142020' '73942853' '44307304' '44544721' '42128879'
 '51611411' '36769988' '43165516' '39057853' '31199814' '27210363'
 '39163930' '64251915' '35722715' '44565107' '30112376' '33660719'
 '57825995' '58735223' '40894387' '68842439' '60136911' '53965795'
 '57107867' '61196766' '70431783' '55853903' '75411313' '61126473'
 '50269176' '55983812' '54651461' '67760550' '55281686' '51106127'
 '61234890' '56731302']
['nd' '45828198' '56615141' '50196282' '37333987' '49967494' '43092102'
 '44419492' '72378244' '48283984' '37926925' '55224425' '50182788'
 '67091404' '43383936' '62030110' '56518270' '66041458' '48685931'
 '49614895' '41138218' '47038583' '62229076' '46488161' '51652635'
 '38923022' '56974304' '46365044' '66947488' '49397275' '42748794'
 '45292210' '39018017' '56169607' '56683463' '46614045' '36997720'
 '31776855' '29408789' '33478568' '28824598' '31065774' '44433088'
 '40568364' '38619056' '36315879' '30591055' '39085611' '31896071'
 '33318870' '36009344' '38033139' '24479092' '39683471' '33018712'
 '29403879' '28857168' '31114293' '30662961' '29534229' '35004961'
 '26250624' '28920359' '33602170' '30122540' '37228649' '26403412'
 '27869931' '34767111' '32187942' '27761464' '32009122' '23603534'
 '28517414' '32527445' '27599188' '32964423' '48370376' '28406424'
 '31202456' '33807620' '32585873' '29964704' '44003948' '44314037'
 '40471077' '43800394' '47834985' '36395107' '27697659' '41250736'
 '46843592' '48876356' '50660935' '42408962' '49228807' '61536401'
 '34868818' '28980479' '34104792' '28492589' '30309536' '25119065'
 '27327380' '25444928' '28631502' '35582290' '41857320' '25237179'
 '27863213' '33594819' '30957765' '31694553' '30135015' '36070657'
 '39677045' '31035302' '33799423' '33119412' '33386519' '29055598'
 '42835026' '51183487' '23136364' '26283084' '31726688' '26264696'
 '25541804' '18185581' '23035540' '25588362' '24835463' '19457596'
 '24365536' '21703868' '21621641' '26323558' '21922272' '17758318'
 '23917992' '25254301' '26427789' '26224098' '34537334' '27013536'
 '32250509' '30411583' '38588817' '31549556' '28376454' '26450519'
 '27660655' '27755895' '26702800' '26139531' '14778034' '14199918'
 '26688087' '17891795' '26657777' '45750047' '23737989' '14967821'
 '25196192' '27897938' '19798789' '27492739' '26253935' '15200802'
 '27244684' '25972786' '32595745' '108713556' '30484116' '30507066'
 '99218724' '23974143' '41149892' '27582905' '31885101' '23003355'
 '24590249' '17527947' '13460391' '26061924' '13712108' '13112580'
 '17849246' '28396629' '25209434' '23644368' '26078891' '24909166'
 '23457656' '22535712' '21657959' '20409065' '25738280' '27187057'
 '20446948' '32789014' '18015665' '29885812' '53352009' '49770144'
 '48357710' '42459761' '47160739' '45559355' '55631128' '53343808'
 '46882165' '48527502' '35382737' '31219087' '45880739' '53195354'
 '36217315' '49493067' '48969354' '35156706' '40243008' '41122863'
 '52006670' '51048153' '37965126' '38621442' '49351927' '38982136'
 '51393026' '46432787' '42084716' '53180351' '45692619' '46050821'
 '51354369' '47417929' '42727633' '48556603' '60159437' '52266255'
 '45895949' '52542721' '63815750' '37059631' '37220382' '37321086'
 '44550801' '31739015' '36792867' '33644540' '26885315' '23233239'
 '34152854' '56459110' '30599678' '38347897' '26451023' '29922557'
 '51188317' '50556354' '35677742' '60593602' '53050539' '47720074'
 '49276802' '53493790' '60964681' '48719728' '65226412' '52623395'
 '44947869' '49125640' '47527630' '58986707' '47843458' '44877981'
 '53728245' '50436861']
['nd' '25858914' '33677737' '30056165' '22240355' '29871482' '25901324'
 '26079239' '42642251' '28421126' '22763406' '33085180' '28902310'
 '39877023' '26255363' '36848225' '33376805' '39527642' '29326427'
 '29232133' '24634216' '27498780' '35966262' '27876765' '30964413'
 '22698869' '34725892' '27963226' '39377962' '29250353' '25459692'
 '26122680' '23134301' '34091648' '33803714' '27475846' '21844207'
 '19611626' '17754134' '20231098' '16858439' '18229402' '27548307'
 '25429666' '24319754' '23532564' '19072163' '24620972' '19935188'
 '19786427' '22145632' '23810277' '14920972' '23956285' '19824282'
 '17803461' '17580324' '18816415' '18542177' '17838164' '20814161'
 '15844275' '18084834' '20416084' '18288268' '22595983' '15906969'
 '17117725' '21138425' '19893865' '17420435' '19313751' '14827487'
 '17028678' '19334275' '17129209' '20225742' '29105764' '17155538'
 '18268238' '20221875' '19786723' '18570713' '26318280' '26951438'
 '24711525' '26882846' '27996106' '21583873' '16485594' '24482321'
 '27953759' '28477786' '30146048' '25306557' '29731250' '36637912'
 '21005346' '17749156' '20572995' '17485730' '17849886' '15092163'
 '16021203' '15238603' '16810551' '21522008' '25570915' '15511559'
 '16604228' '20143799' '18566021' '18881086' '18262980' '22342466'
 '23861206' '18287782' '20498832' '20357378' '20488520' '18035601'
 '25393462' '30248605' '13247207' '14818404' '16488426' '14645324'
 '14182524' '9870200' '13438793' '14520494' '13802542' '10862101'
 '13453294' '12456555' '12065976' '14696204' '12820867' '9798045'
 '13198644' '14504212' '14835164' '14689578' '20409531' '16284040'
 '19356091' '18600233' '22888932' '18592680' '15823476' '14607974'
 '14831508' '15781701' '15116643' '14442562' '7996506' '7740478'
 '15332182' '9744069' '14991142' '27187768' '13454696' '7969903'
 '14203329' '15576190' '10834493' '15519832' '14437793' '8271214'
 '15484015' '14532565' '18284879' '60517895' '16995232' '16749104'
 '54304562' '12972195' '24378103' '15003980' '17827599' '13396918'
 '13699043' '10132927' '7044202' '14305268' '7199178' '7066768' '10155513'
 '15940091' '14472362' '13636246' '14813855' '14029437' '13309573'
 '12820667' '12239365' '11819168' '14436374' '15362523' '12012475'
 '19627599' '9468158' '18205859' '32291953' '30240823' '28497441'
 '25748746' '28001602' '27033300' '33093196' '31718297' '27024859'
 '29287024' '20917883' '18983040' '27666765' '31712049' '21882262'
 '29110862' '29187442' '21546674' '23552028' '25310866' '30083018'
 '29579447' '23355893' '22660038' '30184176' '22969349' '30972033'
 '27515570' '26003392' '32267652' '27452882' '27755673' '30887349'
 '28258994' '25252429' '29211789' '35440543' '31165059' '27966048'
 '31798351' '38051361' '22252031' '22396003' '21597542' '26314485'
 '19040718' '22274764' '19893078' '16826033' '14376719' '20790349'
 '32933908' '18598718' '23290247' '16346730' '18432153' '31092055'
 '30694750' '21787882' '36117754' '31976663' '29108512' '29719005'
 '32496125' '35844301' '29423031' '39080308' '32203483' '27229218'
 '30096049' '28867144' '35513360' '28814733' '27369684' '32464153'
 '31141010']
['nd' '677932' '361677' '411311' '309479' '803006' '519133' '847001'
 '459666' '844192' '787553' '474504' '559368' '561158' '818382' '637308'
 '650437' '496880' '648687' '813335' '439079' '430316' '604951' '832731'
 '565468' '749087' '91032' '900079' '688891' '775640' '768088' '782835'
 '820124' '908389' '856424' '532870' '845180' '529014' '724932' '634798'
 '664411' '499218' '651920' '738302' '745359' '663306' '885370' '872659'
 '832896' '420484' '754221' '652684' '539916' '554931' '490931' '865469'
 '606439' '718571' '390473' '788274' '589896' '738476' '878725' '790676'
 '831639' '397497' '657470' '807848' '445412' '719300' '893556' '783029'
 '945756' '431883' '392123' '780177' '676932' '714911' '678593' '465258'
 '316885' '537543' '786212' '453976' '864264' '730486' '664624' '420689'
 '690632' '706845' '784168' '655011' '824985' '855605' '812994' '758352'
 '574144' '409967' '680605' '645149' '656595' '282283' '743149' '657068'
 '586255' '616334' '594440' '642381' '738006' '685716' '609961' '404060'
 '537041' '829313' '745969' '721393' '673068' '814315' '744246' '761890'
 '692616' '396380' '800676' '652032' '829615' '749178' '454496' '473909'
 '611978' '813402' '492096' '620447' '544919' '376818' '732739' '760979'
 '795737' '479400' '781121' '744235' '687041' '539771' '744756' '757977'
 '866068' '603190' '468526' '214507' '669467' '535544' '353998' '477800'
 '759911' '750269' '606868' '517819' '456720' '832707' '666877' '668012'
 '705894' '609302' '645093' '730390' '605805' '468319' '784379' '654048'
 '609389' '362958' '857631' '568570' '936548' '781709' '812474' '1005488'
 '618161' '720183' '534870' '708225' '774428' '634375' '472197' '514847'
 '747599' '602258' '381783' '632708' '532104' '635862' '741160' '681887'
 '562581' '686313' '657937' '638746' '540575' '683991' '748062' '812910'
 '446522' '359302' '662985' '733950' '369402' '960863' '774761' '757689'
 '552520' '626302' '776419' '590280' '941430' '782892' '898930' '727885'
 '473754' '646340' '788797' '791267' '950204' '615282' '895258' '797465'
 '742431' '728209' '296494' '699664' '679848' '927088' '764087' '924184'
 '896073' '783465' '544288' '751813' '856817' '878314' '664306' '730064'
 '914471' '863816' '550335' '471079' '386740' '376727' '386505' '628426'
 '593181' '666494' '753819' '746661' '549651' '846754' '862107' '688377'
 '812345' '682195' '767167' '951871' '596729' '745077' '593859' '768000'
 '932416' '714081' '955673' '288975' '832427' '735920' '691006' '980722'
 '830476' '859132' '742392' '671352' '894145' '989525' '876380']
['nd' '525299' '298009' '332697' '268453' '657376' '437859' '681657'
 '336527' '691070' '664511' '380585' '444211' '431511' '671587' '493549'
 '505588' '381917' '522523' '647954' '368619' '335388' '463100' '670516'
 '463945' '629273' '59147' '726126' '493957' '630729' '642896' '628958'
 '701899' '715020' '668146' '448844' '727745' '461276' '646595' '547427'
 '601717' '416578' '514407' '601988' '607516' '556799' '769701' '714830'
 '727700' '367402' '654071' '556303' '503407' '473971' '421454' '760179'
 '549457' '607357' '346712' '689330' '496300' '676337' '785647' '675475'
 '735048' '332813' '589340' '722009' '386034' '624537' '788515' '678673'
 '878816' '391033' '348371' '699675' '589888' '600303' '610003' '410999'
 '271339' '465289' '691869' '367954' '701264' '603147' '545845' '327804'
 '583473' '630774' '656672' '538422' '648976' '689402' '665594' '613065'
 '452625' '352914' '601896' '560728' '582097' '254215' '688346' '592524'
 '541868' '557476' '520521' '544978' '677863' '619337' '502474' '357595'
 '464121' '730280' '635131' '596422' '596744' '697133' '638435' '655704'
 '599909' '339385' '636690' '622602' '768462' '678888' '424584' '444871'
 '611978' '772559' '460938' '582567' '544919' '358285' '709318' '742948'
 '741880' '458982' '781121' '705885' '639306' '500163' '689903' '654150'
 '781139' '533037' '419245' '185219' '602429' '483865' '334204' '433735'
 '690089' '693092' '567062' '517819' '456720' '763578' '666877' '618930'
 '570851' '578870' '645093' '679682' '558694' '468319' '719907' '605877'
 '609389' '338477' '789225' '502582' '644049' '706129' '725264' '726453'
 '595769' '587431' '499739' '629964' '735143' '592958' '472197' '514847'
 '696505' '602258' '381783' '632708' '492202' '588785' '701543' '635182'
 '530584' '655670' '632514' '619733' '530882' '633390' '681578' '794254'
 '382578' '359302' '580891' '527028' '304339' '743489' '639241' '596738'
 '460528' '490541' '595195' '434991' '739388' '665847' '788701' '590920'
 '384186' '559973' '630560' '644605' '809928' '492972' '738860' '586582'
 '572616' '604420' '265137' '564183' '571710' '737426' '599966' '752462'
 '710633' '628059' '444562' '596905' '696299' '727533' '540718' '556426'
 '719250' '706895' '453544' '372971' '321867' '315764' '330022' '494823'
 '507626' '571667' '646347' '678146' '515876' '726901' '657987' '607116'
 '679447' '612710' '660926' '769603' '473976' '632111' '443101' '595602'
 '747153' '583753' '766061' '223138' '675839' '579315' '543164' '792013'
 '692158' '694327' '598588' '531150' '746228' '795144' '686401']
['nd' '1235' '961' '934' '865' '1420' '1140' '1277' '1009' '1339' '1319'
 '1042' '1115' '1170' '1264' '1171' '1068' '1073' '1248' '1398' '1174'
 '1128' '1169' '1292' '1364' '524' '1378' '1229' '1207' '1282' '1159'
 '1305' '1374' '1340' '1086' '1452' '1167' '1348' '1019' '1003' '1187'
 '1280' '1101' '903' '1426' '1313' '1372' '1209' '1369' '1271' '1275'
 '1044' '1352' '1246' '1251' '1556' '1523' '1650' '1531' '1326' '1317'
 '1033' '1324' '1393' '1059' '1308' '1454' '1213' '1208' '1022' '1303'
 '1243' '1236' '970' '1041' '1351' '1164' '1214' '1037' '1223' '1212'
 '1219' '1290' '1464' '1347' '1286' '1096' '1287' '1158' '1333' '926'
 '1258' '1259' '1173' '1166' '1134' '1102' '1306' '1095' '969' '1195'
 '1322' '1316' '1227' '1331' '1439' '1401' '1268' '1410' '1035' '1470'
 '1519' '1387' '1056' '1074' '1283' '1048' '1403' '915' '1413' '1498'
 '1448' '1263' '1596' '1404' '1337' '1276' '1465' '1153' '1027' '712'
 '1392' '911' '1197' '1419' '1249' '1471' '1505' '1310' '1262' '1253'
 '1300' '1459' '1184' '1368' '1395' '1432' '1358' '1332' '1302' '1366'
 '1550' '1234' '1421' '1296' '1182' '1438' '1495' '1233' '955' '1388'
 '1559' '1554' '1178' '1265' '1321' '1242' '1221' '1315' '1370' '1521'
 '1461' '1353' '1250' '1350' '1476' '1481' '1021' '1114' '1430' '1336'
 '1434' '1381' '1344' '1045' '1196' '1148' '1288' '1480' '1408' '1087'
 '1359' '1391' '1245' '1346' '1239' '938' '1354' '1230' '1225' '1365'
 '1360' '1051' '1412' '1460' '1204' '1082' '972' '995' '1081' '1211'
 '1440' '1301' '1355' '1453' '1405' '1428' '1218' '1175' '1185' '1231'
 '789' '1137' '1429' '1206' '1466' '1417']
['20.46' '20.2' '35.46' '28.53' '28.76' '28.16' '25.39' '30.46' '24.03'
 '31.02' '24.15' '25.72' '21.87' '26.42' '32.65' '23.38' '21.6' '18.68'
 '21.59' '36.46' '31.67' '30.59' '22.56' '37.95' '25.69' '23.12' '19'
 '17.93' '33.19' '22.38' '29.04' '22.31' '32.1' '38.49' '30.37' '25.4'
 '23.05' '23.18' '25.21' '18.59' '21.19' '24.46' '22.77' '20.25' '28.51'
 '27.31' '27.55' '29.38' '18.52' '29.69' '21.51' '27.76' '28.67' '27.28'
 '19.97' '24.92' '19.4' '30.4' '23.74' '25.11' '24.48' '23.72' '23.17'
 '20.87' '23.07' '21.97' '24.02' '30.74' '22.66' '39.97' '31.95' '35.28'
 '22.34' '35.21' '22.7' '37.32' '34.2' '22.72' '35.52' '25.08' '23.15'
 '33.18' '34.78' '30.55' '30.5' '32.49' '40.21' '25.37' '22.69' '36.71'
 '28.97' '21.07' '20.79' '36.9' '28.23' '30.23' '37.54' '30.12' '23.52'
 '33.27' '22.04' '32.98' '25.35' '30.29' '20.31' '32.7' '25.42' '33.23'
 'nd' '16.65' '23.73' '22.06' '23.81' '21.08' '24.34' '22.22' '17.4'
 '19.48' '21.33' '19.23' '24.97' '24.84' '21.56' '18.31' '24.86' '23.03'
 '24.44' '22.94' '21.21' '22.48' '22.6' '24.17' '21.64' '24.06' '24.14'
 '23.92' '23.83' '20.69' '20.81' '18.75' '26.67' '17.69' '26.3' '19.05'
 '25.07' '26' '25.64' '29.64' '27.99' '25.3' '29.03' '28.19' '26.35'
 '26.99' '26.83' '31.4' '17.26' '16.87' '27.64' ' -' '26.78' '26.9'
 '29.27' '25.56' '25.6' '26.77' '17.29' '24.77' '23.43' '19.84' '18.21'
 '20.62' '20.08' '18.83' '20.9' '21.11' '18.37' '20.57' '19.03' '20.24'
 '19.98' '19.63' '19.47' '20.42' '29.17' '25.31' '25.5' '27.58' '26.82'
 '25.75' '25.16' '25.26' '25.84' '26.04' '26.71' '18.49' '21.55' '23.88'
 '22.68' '15.57' '20.76' '24.68' '22.81' '23.59' '24.61' '24.22' '20.02'
 '22.49' '19.72' '21.34' '23.36' '24.62' '20.45' '23.28' '20.07' '26.73'
 '24.74' '23.67' '22.23' '19.83' '17.58' '19.78' '18.43' '16' '19.69'
 '19.29' '17.73' '20.8' '20.05' '19.59' '22.86' '17.41' '23.44' '20.55'
 '21.89' '20.7' '24.16' '24.8' '23.51' '22.91' '25.78' '22.13' '24.39'
 '22.64' '20.52' '23.68' '27.06' '19.16' '19.38' '25.51' '26.56' '26.13'
 '24.89' '25.24' '25.48' '25.59' '29.06' '23.66' '26.57' '25.71' '26.22'
 '25' '27.12' '32.58' '27.43' '18.07' '19.57' '27.15' '25.97' '29.79'
 '27.72' '25.65' '27.78' '17.97' '19.33' '17.8' '18.99' '20.17' '18.67'
 '19.14' '19.49' '19.13' '17.94' '24.78' '18.25' '22.41' '23.94' '27.24'
 '25.47' '27.22' '26.44' '32.02' '27.53' '29.07' '25.28' '26.64' '25.2'
 '25.45' '25.1' '25.18' '18.03' '19.53' '18.2' '19.15' '18.72' '19.35'
 '19.92' '19.96' '28.33' '19.36' '19.44' '25.81' '26.45' '28.3' '20.66'
 '25.73' '22.07' '16.97' '24.88' '21.48' '17.63' '18.26' '23.63' '22.89'
 '28.73' '23.46' '18.73' '27.38' '33.24' '27.04' '37.5' '26.12' '29.41'
 '33.63' '27.44' '27.81' '25.61' '27.34' '24.7' '29.7' '18.6' '26.6'
 '26.5' '41.8' '23.2' '28.8' '24' '21.5' '31.2' '23.6' '24.9' '21.1' '30'
 '28.9' '27.9' '20.6' '23.1' '21.8' '25.8' '27.4' '31.9' '27.1' '33.2'
 '27.5' '22.4' '24.6' '24.2' '21.9' '25.9' '29.2' '29.6' '30.9' '26.7'
 '22.3' '26.1' '22' '23.8' '23' '33.9' '29.1' '28.4' '25.7' '36.4' '32.8'
 '31.3' '33' '23.7' '20.4' '31.7' '31' '31.8' '27.8' '35.1' '44.6' '27.2'
 '33.7' '33.3' '29.9' '19.9' '21.2' '23.4' '36.6' '28.5' '30.2' '29.4'
 '29.5' '21.3' '27.6' '24.3' '22.9' '28.1' '29' '30.6' '21.4' '39.7' '28'
 '32.9' '28.2' '32.3' '19.6' '34.4' '34.3' '31.6' '32.4' '32' '37.2'
 '33.4' '23.5' '22.5' '24.1' '41.2' '19.5' '24.5' '20.3' '24.4' '30.7'
 '33.8' '23.3' '31.1' '28.7' '35.9' '42' '42.9' '31.5' '34' '23.9' '34.6'
 '22.1' '36.5' '22.8' '30.1' '37.7' '41.3' '34.8' '36.7' '43.5' '46.6'
 '35.4' '45.7' '36.1' '38.6' '33.5' '41.9' '32.6' '36.2' '37' '40.2'
 '30.3' '32.5' '20.5' '38' '20' '35.5' '35.2' '37.3' '27.3' '38.5' '35.3'
 '40' '34.5' '38.7' '34.9' '18.1' '20.1' '38.3' '34.7' '39.1' '40.7' 'na'
 '17.9' '26.2' '16.9' '19.8' '17.3' '19.1' '18' '21.7' '26.8' '18.9'
 '29.3' '17.6' '18.8' '35.6' '35' '26.4' '17.7' '19.3' '22.2' '17.1'
 '18.5' '28.6' '18.7' '24.54' '25.88' '25.63' '21.26' '24.98' '30.86'
 '25.46' '25.62' '28.65' '19.2' '25.06' '22.39' '21.28' '21.78' '21.88'
 '25.19' '25.95' '20.98' '19.76' '20.68' '20.91' '23.33' '20.94' '22.96'
 '24.27' '19.43' '20.93' '21.01' '19.68' '23.53' '28.03' '24.49' '21.63'
 '31.14' '21.45' '26.89' '23.31' '20.83' '21.16' '21.72' '24.24' '20.72'
 '27.77' '23.45' '35.16' '22.58' '25.14' '22.84' '20.28' '21.22' '15.94'
 '21.61' '29.02' '22.65' '19.56' '21.47' '19.81' '20.13' '19.54' '25.53'
 '23.89' '20.32' '19.58' '25.91' '19.71' '21.29' '19.95' '22.55' '19.94'
 '20.03' '22.79' '19.22' '23.62' '20.09' '22.46' '22.63' '24.04' '17.86'
 '22.95' '21.62' '22.76' '21.99' '22.73' '24.51' '19.24' '20.18' '20.58'
 '17.85' '21.75' '21' '27' '39' '36' 25 30 20 21 24 28 31 23 29 17 22 27
 26 '15' '25.92' '14.97' '20.34' '28.62' '23.93' '26.58' '23.77' '20.01'
 '23.49' '22.19' '23.37' '31.53' '20.36' '29.52' '27.01' '18.77' '19.67'
 '14.05' '21.69' '21.53' '15.15' '17.31' '16.73' '28.93' '15.62' '16.45'
 '22.14' '27.86' '26.53' '23.95' '30.22' '15.78' '21.27' '15.66' '15.77']
['nd' 'hgc' 'lgc']
['nd' 'hpc' 'lpc']
['Metaphlan2_Analysis' 'nd']
['nd' 'g39517' 'g39518' 'g39521' 'g39528' 'g39531' 'g39492' 'g39497'
 'g39505' 'g39507' 'g39515' 'g39511' 'g39607' 'g39609' 'g39611' 'g39612'
 'g39614' 'g39616' 'g39618' 'g39621' 'g39622' 'g39626' 'g39628' 'g39457'
 'g39512' 'g39467' 'g39468' 'g39469' 'g39473' 'g39476' 'g39479' 'g39487'
 'g39488' 'g39489' 'g39491' 'g39510' 'g39462' 'g39606' 'g39624' 'g39464'
 'g39471' 'g39474' 'g39478' 'g39623' 'g39483' 'g39484' 'g39485' 'g39486'
 'g39522' 'g39524' 'g39525' 'g39532' 'g39495' 'g39496' 'g39482' 'g39620'
 'g39558' 'g39581' 'g39595' 'g39603' 'g39613' 'g39556' 'g39602' 'g39600'
 'g39599' 'g38882' 'g38877' 'g38912' 'g38875' 'g38915' 'g38887' 'g38880'
 'g38883' 'g38913' 'g38876' 'g38879' 'g39542' 'g39545' 'g39549' 'g39550'
 'g39551' 'g39552' 'g39554' 'g39555' 'g39557' 'g39536' 'g39574' 'g39575'
 'g39577' 'g39579' 'g39582' 'g39583' 'g39588' 'g39590' 'g39592' 'g39597'
 'g39598' 'g39566' 'g38906' 'g38892' 'g38888' 'g38899' 'g38890' 'g38898'
 'g38886' 'g38878' 'g38910' 'g38896' 'g38893' 'g38904' 'g38905' 'g38894'
 'g38911' 'g38907' 'g38891' 'g39500' 'g38895' 'g39501' 'g50285' 'g50300'
 'g50354' 'g50350' 'g50345' 'g50348' 'g50346' 'g50339' 'g50336' 'g50347'
 'g50334' 'g50333' 'g49773' 'g50299' 'g49777' 'g49781' 'g49782' 'g49784'
 'g49785' 'g49787' 'g49788' 'g49789' 'g49791' 'g49792' 'g49793' 'g49795'
 'g49796' 'g49800' 'g49801' 'g49780' 'g49802' 'g50284' 'g50293' 'g50325'
 'g50315' 'g50330' 'g50308' 'g50314' 'g50318' 'g50313' 'g50320' 'g50324'
 'g50312' 'g50322' 'g50317' 'g50295' 'g50289' 'g50276' 'g50278' 'g50287'
 'g50279' 'g50286' 'g50280' 'g50291' 'g50283' 'g50281' 'g50297' 'g50290'
 'g50282' 'g50298' 'g50321' 'g49803' 'g49807' 'g53172' 'g49804' 'g53168'
 'g49808' 'g49809' 'g49810' 'g49813' 'g49814' 'g49815' 'g49816' 'g53167'
 'g50306' 'g50316' 'g39560' 'g39561' 'g39565' 'g39585' 'g39493' 'g50355'
 'g50358' 'g50359' 'g50381' 'g50382' 'g50379' 'g50384' 'g50386' 'g39537'
 'g39573' 'g39596' 'g39506' 'g50385' 'g50387' 'g50388' 'g50426' 'g50425'
 'g50369' 'g50372' 'g50373' 'g50374' 'g50376' 'g50377' 'g50360' 'g50365'
 'g50367' 'g50368' 'g50288' 'g50307' 'g50327' 'g50329' 'g50331' 'g50328'
 'g50326' 'g50332' 'g50319' 'g50302' 'g50304' 'g50309' 'g50303' 'g50305'
 'g50310' 'g50294' 'g50415' 'g50416' 'g50428' 'g50389' 'g50390' 'g50392'
 'g50393' 'g50394' 'g50395' 'g50397' 'g50399' 'g50401' 'g50402' 'g50396'
 'g50403' 'g50404' 'g50407' 'g50406' 'g50408' 'g50427' 'g50424' 'g50418'
 'g50423' 'g50422' 'g50414' 'g50412' 'g50421' 'g50420' 'g50411' 'g50410'
 'g50405' 'g50413']
['nd' 'male' 'female']
['nd' '26' '28' '24' '23' '27' '25' 28 25 27 26 23 24 '38' '40' '39' '41'
 'na' 40 38 39 41 29 32 31]
['nd' '23-27_weeks' '28-32_weeks' '37-42_weeks']
['nd' 'yes' 'no']
['nd' '10' '12' '8' '5' '11' '14' '7' '9' '6' '13' '15' '4' '21' '20' '22'
 '3' '118' '64' '19' '24' '189' '418' '117' '386' '84' '168' '344' '17'
 '100' '206' '159' '380' '116' '153' '98' '194' '372' '401' '162' '16'
 '345' '169' '352' '76' '336' '157' '210' '377' '181' '70' '351' '208'
 '68' '83']
['nd' 'week02' 'week01' 'week0' 'week03' '2-3_months' '11-12_months'
 '5-6_months']
['nd' '11-14_days' '5-8_days' '18-21_days' '2-3_months' '5-6_months'
 '11-12_months']
['nd' '11232_st_11_1' '11112_st_14_1' '11151_st_08_1' '11191_st_05_1'
 '11351_st_11_1' '11041_st_14_1' '11351_st_05_1' '11151_st_14_1'
 '11202_st_11_1' '11291_st_08_1' '11231_st_08_1' '10561_st_11_1'
 '10051-st-11' '10181-st-11' '11291_st_11_1' '10181-st-8' '10231-st-11'
 '10071-st-8' '10402-st-5' '10161-st-11' '10891-st-11' '10891-st-5'
 '10451-st-11' '10471-st-11' '10601-st-11' '10472-st-11' '10591-st-5'
 '10541-st-11' '10301-st-11' '10542-st-11' '10072-st-8' '10542-st-8'
 '11231_st_11_1' '11081_st_14_1' '11921_st_11_1' '12121_sn_05_1'
 '12121_sn_11_1' '12211_sn_11_1' '12251_st_11_1' '12261_st_11_1'
 '12281_st_05_1' '12251_st_08_1' '12271_sn_11_1' '12311_st_08_1'
 '12431_st_08_1a' '12421_sn_11_1' '12491_st_08_1' '12321_st_08_1'
 '11292_st_11_1' '12491_st_11_1' '12331_st_11_1' '12351_sn_11_1'
 '12521_st_08_1' '12521_sn_11_1' '12361_sn_11_1' '12392_st_11_1'
 '12671_st_11_1' '12541_st_14_1' '12391_st_08_1' '12361_st_08_1'
 '12631_st_11_1' '12621_sn_11_1' '12651_sn_11_1' '11241_st_11_1'
 '12321_st_11_1' '12021_st_11_1' '10521-st-11' '10501-st-5'
 '12311_st_11_1' '12431_st_11_1' '12512_st_08_1' '12511_st_11_1'
 '12512_st_11_1' '12511_st_08_1' '12331_sn_05_1' '12351_sn_05_1'
 '12571_st_05_1' '12601_sn_11_1' '12391_st_11_1' '12641_st_14_1'
 '12621_sn_05_1' '12631_sn_05_1' '12312_st_08_1' '12611_sn_11_1'
 '12701_sn_11_1' '12641_st_08_1' '12651_sn_05_1' '12671_sn_05_1'
 '11111_st_11_1' '11111_st_08_1' '11091_st_05_1' '11192_st_11_1'
 '11141_st_11_1' '11121_st_11_1' '11141_st_05_1' '10441_st_11_1'
 '11091_st_11_1' '11201_st_11_1' '12701_st_08_1' '10501-st-11'
 '12271_sn_05_1' '12221_st_11_1' '10131-sn-8' '10701-st-14' '10551-st-14'
 '10102-st-8' '10101-st-11' '10811-st-5' '10361-st-11' '10581-st-11'
 '10371-st-11' '10451-st-8' '10671-st-5' '10351-st-11' '10351-st-8'
 '10691-st-14' '12151_st_11_1' '10151-st-11' '11541_st_08_1'
 '11621_sn_11_1' '11341_st_14_1' '11792_st_11_1' '11862_st_11_1'
 '11871_st_05_1' '11911_st_05_1' '11961_sn_05_1' '11912_st_05_1'
 '11981_sn_11_1' '12021_st_08_1' '12072_st_05_1' '12211_st_08_1'
 '12261_sn_05_1' '11542_st_05_1' '11912_st_14_1' '11962_sn_11_1'
 '11961_sn_11_1' '10541-st-21' '10141-st-11' '10521-st-14' '10301-st-14'
 '10701-st-21' '10541-st-14' '10741-st-11' '10542-st-14' '10741-st-14'
 '10811-st-11' '10741-st-8' '30061_st_11_1' '30071_st_05_1'
 '30081_st_05_1' '30081_st_11_1' '30101_st_05_1' '30091_st_05_1'
 '30091_st_11_1' '30101_st_11_1' '30121_st_05_1' '30131_st_05_1'
 '30121_st_11_1' '30131_st_11_1' '30141_st_05_1' '30161_st_05_1'
 '10141-st-21' '30151_st_05_1' '30141_st_11_1' '30151_st_11_1'
 '30161_st_11_1' '11401_st_11_1' '11311_sn_11_1' '11401_st_08_1'
 '11402_st_08_1' '11402_sn_11_1' '11412_st_08_1' '11161_sn_11_1'
 '11181_st_11_1' '11361_st_11_1' '11462_st_05_1' '11461_st_08_1'
 '11501_sn_11_1' '11501_st_08_1' '11531_st_08_1' '11412_st_11_1'
 '11531_st_11_1' '11632_sn_11_1' '11681_st_14_1' '11691_st_14_1'
 '11701_st_14_1' '11381_sn_11_1' '11781_sn_11_1' '11721_st_05_1'
 '11721_st_08_1' '11821_st_11_1' '11821_sn_05_1' '11861_st_11_1'
 '11891_sn_05_1' '11891_st_11_1' '11911_sn_11_1' '11632_st_05_1'
 '10101-st-8' '10261-st-11' '30171_st_05_1' '30171_st_11_1'
 '30191_st_05_1' '30181_st_05_1' '30191_st_11_1' '30181_st_11_1'
 '30201_st_05_1' '30201_st_11_1' '30252_st_05_1' '30251_st_05_1'
 '30251_st_11_1' '30252_st_11_1' '30211_st_05_1' '30221_st_05_1'
 '30031_st_05_1' '30011_st_08_1' '30031_st_11_1' '10071-st-11'
 '10271-st-5' '10291-st-5' '10291-st-11' '10261-st-8' '10311-st-5'
 '11191_st_11_1' '10301-st-8' '30021_sn_05_1' '30011_st_05_1'
 '30051_st_11_1' '30221_st_11_1' '30061_st_05_1' '30051_st_05_1'
 '10271-st-11' '11292_st_05_1' '10871-st-5' '12431_st_21_1'
 '12431_st_2m_3' '13001_sn_10_1' '12801_sn_10_1' '20201_st_11_1'
 '20201_st_21_1' '20221_st_05_1' '20221_st_11_1' '20221_st_21_1'
 '20561_st_21_1' '20241_st_14_1' '21461_st_08_1' '21461_st_11_1'
 '11141.st.21.1' '12121_st_2m_3' '11401.st.21.1' '11081.st.21.1'
 '12221.st.21.1' '12251.st.21.1' '12261.st.21.1' '12311.st.21.1'
 '12321.st.21.1' '12351.st.21.1' '12521.st.21.1' '12601.st.21.1'
 '12651.st.21.1' '12641.st.21.1' '12701.st.21.1' '11381.st.21.1'
 '11421.sn.21.1' '11412.st.21.1' '11421.st.21.1' '12121_st_21_1'
 '11962_st_5m_6' '30101_sn_1y_1' '30101_st_2m_3' '30141_sn_1y_1'
 '30141_st_21_1' '30141_st_2m_3' '30141_st_5m_6' '30181_st_21_1'
 '30181_st_2m_3' '30191_sn_1y_1' '30191_st_21_1' '30191_st_2m_3'
 '30191_st_5m_6' '11161_sn_21_1' '11161_sn_5m_1' '12121_sn_1y_1'
 '11161_st_21_1' '11341_st_21_1' '11341_st_2m_1' '11341_st_5m_6'
 '11721_st_21_1' '11721_st_2m_3' '11891_sg_5m_6' '11891_st_21_1'
 '11961_sn_1y_1' '11961_sn_21_1' '11961_st_21_1' '11961_st_2m_3'
 '11962_st_1y_1' '11962_st_21_1' '11962_st_2m_3' '11341_st_1y_1'
 '30081_st_5m_6' '11461.st.21.1' '11541.st.21.1' '11862.st.21.1'
 '11501.st.21.1' '11632.st.21.1' '12211.st.21.1' '11631.st.21.1'
 '11681.st.21.1' '11691.st.21.1' '11911.st.21.1' '11912.st.21.1'
 '11921.st.21.1' '11981.st.21.1' '11441_st_08_1' '11311_st_14_1'
 '11621_st_14_1' '11632_st_14_1' '11862_st_14_1a' '12211_st_14_1'
 '12331_st_08_1' '11681.sn.21.1' '12331_st_14_1' '12621_st_14_1'
 '11002_st_14_1' '11002_st_08_1' '11241_st_14_1' '11111_st_14_1'
 '11301_st_1y_1' '11301_st_2m_1' '11301_st_5m' '12621_sn_1y_1'
 '12621_st_21_1' '12151_st_21_1' '20011_st_11_1' '20011_st_21_1'
 '11402.st.21.1' '12392_st_14_1' '30081_st_2m_3' '30081_st_21_1'
 '30081_st_1y_1' '11361_st_05_1' '11441_sn_11_1' '11541_st_14_1'
 '11621_st_05_1' '11631_st_05_1' '11731_st_14_1' '11861_st_05_1'
 '11862_st_05_1' '11871_sn_11_1' '10102-st-11' '10111-sn-8' '10141-sn-5'
 '10161-st-5' '11341_st_05_1' '10311-st-14' '10371-st-5' '10471-st-5'
 '10472-st-5' '11211_st_11_1' '11401_st_14_1' '11161_st_08_1'
 '11161_st_14_1' '11361_st_14_1' '11531_st_14_1' '11631_st_08_1'
 '11631_st_14_1' '11341_st_08_1' '11381_st_14_1' '11711_sn_05_1'
 '10361-st-8' '11711_st_08_1' '11241_st_08_1' '11211_st_05_1'
 '11161_st_05_1' '11631_sn_11_1' '11691_sn_05_1' '11731_st_08_1'
 '11232_st_05_1' '11962_st_05_1' '12031_st_05_1' '12312_st_11_1'
 '12601_st_08_1' '10552_st_11_1' '11081_st_05_1' '11171_sn_11_1'
 '11171_st_05_1' '11202_st_05_1' '11711_sn_11_1' '11721_sn_11_1'
 '11721_st_14_1' '12671_st_14_1' '12651_st_14_1' '11191_st_08_1'
 '11292_st_14_1' '11232_st_08_1' '11081_st_08_1' '11141_st_14_1'
 '11091_st_14_1' '11091_st_08_1' '11211_st_14_1' '11232_st_14_1'
 '11292_st_08_1' '11291_st_14_1' '11891_st_2m_3' '12401_st_08_1'
 '30101_st_21_1' '12121_st_5m_1' '30101_st_5m_1' '11161_st_1y_1'
 '11961_st_5m_1' '12431_st_5m_6' '30011_sn_2m_3' '30011_st_1y_1'
 '30011_st_21_1' '30011_st_2m_3' '30011_st_5m_6' '30031_sn_2m_3'
 '30031_st_21_1' '30031_st_2m_3' '30031_st_5m_6' '11161_st_2m_1'
 '12391_st_14_1' '12401_sn_11_1' '12811_sn_11_1' '11821_st_05_1'
 '11821_st_08_1' '11861_st_14_1' '11821_st_14_1' '11891_st_08_1'
 '11891_st_14_1' '11911_st_14_1' '11961_st_14_1' '11962_st_14_1'
 '11981_st_14_1' '12021_st_14_1' '11921_st_14_1' '12121_st_08_1'
 '12121_st_14_1' '12261_st_08_1' '12251_st_14_1' '12261_st_14_1'
 '12811_st_08_1' '12701_st_14_1' '12631_st_14_1' '12401_st_14_1'
 '12601_st_14_1' '12521_st_14_1' '10581-st-5' '12351_st_14_1'
 '12321_st_14_1' '12511_st_14_1' '12431_st_14_1' '12311_st_14_1'
 '12271_st_14_1' '12221_st_14_1' '12351_st_08_1' '10151-st-5']
['nd' '11232.st.11.1' '11112.st.14.1' '11151.st.08.1' '11191.st.05.1'
 '11351.st.11.1' '11041.st.14.1' '11351.st.05.1' '11151.st.14.1'
 '11202.st.11.1' '11291.st.08.1' '11231.st.08.1' '10561.st.11.1'
 '10051.st.11' '10181.st.11' '11291.st.11.1' '10181.st.08' '10231.st.11'
 '10071.st.08' '10402.st.05' '10161.st.11' '10891.st.11' '10891.st.05'
 '10451.st.11' '10471.st.11' '10601.st.11' '10472.st.11' '10591.st.05'
 '10541.st.11' '10301.st.11' '10542.st.11' '10072.st.08' '10542.st.08'
 '11231.st.11.1' '11081.st.14.1' '11921.st.11.1' '12121.sn.05.1'
 '12121.sn.11.1' '12211.sn.11.1' '12251.st.11.1' '12261.st.11.1'
 '12281.st.05.1' '12251.st.08.1' '12271.sn.11.1' '12311.st.08.1'
 '12431.st.08.1a' '12421.sn.11.1' '12491.st.08.1' '12321.st.08.1'
 '11292.st.11.1' '12491.st.11.1' '12331.st.11.1' '12351.sn.11.1'
 '12521.st.08.1' '12521.sn.11.1' '12361.sn.11.1' '12392.st.11.1'
 '12671.st.11.1' '12541.st.14.1' '12391.st.08.1' '12361.st.08.1'
 '12631.st.11.1' '12621.sn.11.1' '12651.sn.11.1' '11241.st.11.1'
 '12321.st.11.1' '12021.st.11.1' '10521.st.11' '10501.st.05'
 '12311.st.11.1' '12431.st.11.1' '12512.st.08.1' '12511.st.11.1'
 '12512.st.11.1' '12511.st.08.1' '12331.sn.05.1' '12351.sn.05.1'
 '12571.st.05.1' '12601.sn.11.1' '12391.st.11.1' '12641.st.14.1'
 '12621.sn.05.1' '12631.sn.05.1' '12312.st.08.1' '12611.sn.11.1'
 '12701.sn.11.1' '12641.st.08.1' '12651.sn.05.1' '12671.sn.05.1'
 '11111.st.11.1' '11111.st.08.1' '11091.st.05.1' '11192.st.11.1'
 '11141.st.11.1' '11121.st.11.1' '11141.st.05.1' '10441.st.11.1'
 '11091.st.11.1' '11201.st.11.1' '12701.st.08.1' '10501.st.11'
 '12271.sn.05.1' '12221.st.11.1' '10131.sn.08' '10701.st.14' '10551.st.14'
 '10102.st.08' '10101.st.11' '10811.st.05' '10361.st.11' '10581.st.11'
 '10371.st.11' '10451.st.08' '10671.st.05' '10351.st.11' '10351.st.08'
 '10691.st.14' '12151.st.11.1' '10151.st.11' '11541.st.08.1'
 '11621.sn.11.1' '11341.st.14.1' '11792.st.11.1' '11862.st.11.1'
 '11871.st.05.1' '11911.st.05.1' '11961.sn.05.1' '11912.st.05.1'
 '11981.sn.11.1' '12021.st.08.1' '12072.st.05.1' '12211.st.08.1'
 '12261.sn.05.1' '11542.st.05.1' '11912.st.14.1' '11962.sn.11.1'
 '11961.sn.11.1' '10541.st.21' '10141.st.11' '10521.st.14' '10301.st.14'
 '10701.st.21' '10541.st.14' '10741.st.11' '10542.st.14' '10741.st.14'
 '10811.st.11' '10741.st.08' '30061.st.11.1' '30071.st.05.1'
 '30081.st.05.1' '30081.st.11.1' '30101.st.05.1' '30091.st.05.1'
 '30091.st.11.1' '30101.st.11.1' '30121.st.05.1' '30131.st.05.1'
 '30121.st.11.1' '30131.st.11.1' '30141.st.05.1' '30161.st.05.1'
 '10141.st.21' '30151.st.05.1' '30141.st.11.1' '30151.st.11.1'
 '30161.st.11.1' '11401.st.11.1' '11311.sn.11.1' '11401.st.08.1'
 '11402.st.08.1' '11402.sn.11.1' '11412.st.08.1' '11161.sn.11.1'
 '11181.st.11.1' '11361.st.11.1' '11462.st.05.1' '11461.st.08.1'
 '11501.sn.11.1' '11501.st.08.1' '11531.st.08.1' '11412.st.11.1'
 '11531.st.11.1' '11632.sn.11.1' '11681.st.14.1' '11691.st.14.1'
 '11701.st.14.1' '11381.sn.11.1' '11781.sn.11.1' '11721.st.05.1'
 '11721.st.08.1' '11821.st.11.1' '11821.sn.05.1' '11861.st.11.1'
 '11891.sn.05.1' '11891.st.11.1' '11911.sn.11.1' '11632.st.05.1'
 '10101.st.08' '10261.st.11' '30171.st.05.1' '30171.st.11.1'
 '30191.st.05.1' '30181.st.05.1' '30191.st.11.1' '30181.st.11.1'
 '30201.st.05.1' '30201.st.11.1' '30252.st.05.1' '30251.st.05.1'
 '30251.st.11.1' '30252.st.11.1' '30211.st.05.1' '30221.st.05.1'
 '30031.st.05.1' '30011.st.08.1' '30031.st.11.1' '10071.st.11'
 '10271.st.05' '10291.st.05' '10291.st.11' '10261.st.08' '10311.st.05'
 '11191.st.11.1' '10301.st.08' '30021.sn.05.1' '30011.st.05.1'
 '30051.st.11.1' '30221.st.11.1' '30061.st.05.1' '30051.st.05.1'
 '10271.st.11' '11292.st.05.1' '10871.st.05' '12431.st.21.1'
 '12431.st.2m.3' '13001.sn.10.1' '12801.sn.10.1' '20201.st.11.1'
 '20201.st.21.1' '20221.st.05.1' '20221.st.11.1' '20221.st.21.1'
 '20561.st.21.1' '20241.st.14.1' '21461.st.08.1' '21461.st.11.1'
 '11141.st.21.1' '12121.st.2m.3' '11401.st.21.1' '11081.st.21.1'
 '12221.st.21.1' '12251.st.21.1' '12261.st.21.1' '12311.st.21.1'
 '12321.st.21.1' '12351.st.21.1' '12521.st.21.1' '12601.st.21.1'
 '12651.st.21.1' '12641.st.21.1' '12701.st.21.1' '11381.st.21.1'
 '11421.sn.21.1' '11412.st.21.1' '11421.st.21.1' '12121.st.21.1'
 '11962.st.05m.6' '30101.sn.1y.1' '30101.st.2m.3' '30141.sn.1y.1'
 '30141.st.21.1' '30141.st.2m.3' '30141.st.05m.6' '30181.st.21.1'
 '30181.st.2m.3' '30191.sn.1y.1' '30191.st.21.1' '30191.st.2m.3'
 '30191.st.05m.6' '11161.sn.21.1' '11161.sn.05m.1' '12121.sn.1y.1'
 '11161.st.21.1' '11341.st.21.1' '11341.st.2m.1' '11341.st.05m.6'
 '11721.st.21.1' '11721.st.2m.3' '11891.sg.05m.6' '11891.st.21.1'
 '11961.sn.1y.1' '11961.sn.21.1' '11961.st.21.1' '11961.st.2m.3'
 '11962.st.1y.1' '11962.st.21.1' '11962.st.2m.3' '11341.st.1y.1'
 '30081.st.05m.6' '11461.st.21.1' '11541.st.21.1' '11862.st.21.1'
 '11501.st.21.1' '11632.st.21.1' '12211.st.21.1' '11631.st.21.1'
 '11681.st.21.1' '11691.st.21.1' '11911.st.21.1' '11912.st.21.1'
 '11921.st.21.1' '11981.st.21.1' '11441.st.08.1' '11311.st.14.1'
 '11621.st.14.1' '11632.st.14.1' '11862.st.14.1a' '12211.st.14.1'
 '12331.st.08.1' '11681.sn.21.1' '12331.st.14.1' '12621.st.14.1'
 '11002.st.14.1' '11002.st.08.1' '11241.st.14.1' '11111.st.14.1'
 '11301.st.1y.1' '11301.st.2m.1' '11301.st.05m' '12621.sn.1y.1'
 '12621.st.21.1' '12151.st.21.1' '20011.st.11.1' '20011.st.21.1'
 '11402.st.21.1' '12392.st.14.1' '30081.st.2m.3' '30081.st.21.1'
 '30081.st.1y.1' '11361.st.05.1' '11441.sn.11.1' '11541.st.14.1'
 '11621.st.05.1' '11631.st.05.1' '11731.st.14.1' '11861.st.05.1'
 '11862.st.05.1' '11871.sn.11.1' '10102.st.11' '10111.sn.08' '10141.sn.05'
 '10161.st.05' '11341.st.05.1' '10311.st.14' '10371.st.05' '10471.st.05'
 '10472.st.05' '11211.st.11.1' '11401.st.14.1' '11161.st.08.1'
 '11161.st.14.1' '11361.st.14.1' '11531.st.14.1' '11631.st.08.1'
 '11631.st.14.1' '11341.st.08.1' '11381.st.14.1' '11711.sn.05.1'
 '10361.st.08' '11711.st.08.1' '11241.st.08.1' '11211.st.05.1'
 '11161.st.05.1' '11631.sn.11.1' '11691.sn.05.1' '11731.st.08.1'
 '11232.st.05.1' '11962.st.05.1' '12031.st.05.1' '12312.st.11.1'
 '12601.st.08.1' '10552.st.11.1' '11081.st.05.1' '11171.sn.11.1'
 '11171.st.05.1' '11202.st.05.1' '11711.sn.11.1' '11721.sn.11.1'
 '11721.st.14.1' '12671.st.14.1' '12651.st.14.1' '11191.st.08.1'
 '11292.st.14.1' '11232.st.08.1' '11081.st.08.1' '11141.st.14.1'
 '11091.st.14.1' '11091.st.08.1' '11211.st.14.1' '11232.st.14.1'
 '11292.st.08.1' '11291.st.14.1' '11891.st.2m.3' '12401.st.08.1'
 '30101.st.21.1' '12121.st.05m.1' '30101.st.05m.1' '11161.st.1y.1'
 '11961.st.05m.1' '12431.st.05m.6' '30011.sn.2m.3' '30011.st.1y.1'
 '30011.st.21.1' '30011.st.2m.3' '30011.st.05m.6' '30031.sn.2m.3'
 '30031.st.21.1' '30031.st.2m.3' '30031.st.05m.6' '11161.st.2m.1'
 '12391.st.14.1' '12401.sn.11.1' '12811.sn.11.1' '11821.st.05.1'
 '11821.st.08.1' '11861.st.14.1' '11821.st.14.1' '11891.st.08.1'
 '11891.st.14.1' '11911.st.14.1' '11961.st.14.1' '11962.st.14.1'
 '11981.st.14.1' '12021.st.14.1' '11921.st.14.1' '12121.st.08.1'
 '12121.st.14.1' '12261.st.08.1' '12251.st.14.1' '12261.st.14.1'
 '12811.st.08.1' '12701.st.14.1' '12631.st.14.1' '12401.st.14.1'
 '12601.st.14.1' '12521.st.14.1' '10581.st.05' '12351.st.14.1'
 '12321.st.14.1' '12511.st.14.1' '12431.st.14.1' '12311.st.14.1'
 '12271.st.14.1' '12221.st.14.1' '12351.st.08.1' '10151.st.05']
['nd' 'g21650' 'g21653' 'g21661' 'g21686' 'g21698' 'g21701' 'g21712'
 'g21750' 'g21763' 'g21800' 'g21804' 'g21811' 'g21826' 'g21865' 'g21638'
 'g21866' 'g21887' 'g21838' 'g21909' 'd2977' 'd3026' 'd3065' 'd3041'
 'g21953' 'd3030' 'd3017' 'd3046' 'd3062' 'd3064' 'd3007' 'g21834' 'd3051'
 'g21635' 'g21632' 'g21412' 'g21427' 'g21431' 'g21432' 'g21438' 'g21440'
 'g21441' 'g21443' 'g21454' 'g21455' 'g21473' 'g21479' 'g21511' 'g21512'
 'g21633' 'g21519' 'g21534' 'g21535' 'g21536' 'g21540' 'g21549' 'g21550'
 'g21554' 'g21571' 'g21601' 'g21602' 'g21611' 'g21612' 'g21616' 'g21629'
 'g21521' 'g21402' 'd3044' 'd3069' 'g21458' 'g21475' 'g21510' 'g21513'
 'g21514' 'g21515' 'g21527' 'g21528' 'g21530' 'g21546' 'g21551' 'g21553'
 'g21558' 'g21562' 'g21456' 'g21576' 'g21585' 'g21594' 'g21595' 'g21600'
 'g21658' 'g21662' 'g21663' 'g21669' 'g21670' 'g21682' 'g21713' 'g21760'
 'g21761' 'g21764' 'g21580' 'd3014' 'g21448' 'g21439' 'g21850' 'd3077'
 'd3067' 'd3076' 'd3053' 'd3018' 'g21964' 'g21945' 'd3070' 'd3050' 'd3081'
 'd3032' 'd3003' 'd3010' 'g21447' 'g21970' 'g21211' 'g21241' 'g21265'
 'g21289' 'g21334' 'g21335' 'g21358' 'g21361' 'g21362' 'g21385' 'g21400'
 'g21426' 'g21430' 'g21437' 'g21207' 'g21380' 'g21378' 'g21376' 'd2935'
 'd2943' 'g21958' 'd2927' 'd2961' 'd2934' 'd2925' 'd2936' 'd2963' 'd2959'
 'd2946' 'g21717' 'g21718' 'g21719' 'g21720' 'g21721' 'g21722' 'g21723'
 'g21724' 'g21725' 'g21726' 'g21727' 'g21728' 'g21730' 'g21731' 'd2937'
 'g21732' 'g21733' 'g21734' 'g21735' 'g21158' 'g21159' 'g21160' 'g21161'
 'g21163' 'g21166' 'g21174' 'g21179' 'g21180' 'g21182' 'g21189' 'g21199'
 'g21200' 'g21210' 'g21150' 'g21219' 'g21255' 'g21263' 'g21268' 'g21270'
 'g21278' 'g21285' 'g21293' 'g21313' 'g21336' 'g21340' 'g21343' 'g21355'
 'g21368' 'g21369' 'g21250' 'g21849' 'g21893' 'g21736' 'g21737' 'g21738'
 'g21739' 'g21740' 'g21741' 'g21742' 'g21743' 'g21744' 'g21745' 'g21746'
 'g21747' 'g21748' 'g21749' 'g21621' 'g21619' 'g21622' 'g21837' 'g21888'
 'g21900' 'g21884' 'g21883' 'g21899' 'g21782' 'g21898' 'g21620' 'g21618'
 'g21617' 'g21613' 'g21624' 'g21623' 'g21880' 'g21790' 'g21951' 'g38407'
 'g38408' 'g38445' 'g38446' 'g38448' 'g38449' 'g38450' 'g38451' 'g38452'
 'g38488' 'g38491' 'g38592' 'g38593' 'g50042' 'g38406' 'g50060' 'g50069'
 'g50078' 'g50083' 'g50084' 'g50088' 'g50090' 'g50093' 'g50101' 'g50103'
 'g50104' 'g50114' 'g50115' 'g50133' 'g50134' 'g50067' 'g50135' 'g38405'
 'g38403' 'g38339' 'g38340' 'g38346' 'g38347' 'g38348' 'g38349' 'g38356'
 'g38357' 'g38358' 'g38359' 'g38360' 'g38361' 'g38377' 'g38378' 'g38404'
 'g38380' 'g38385' 'g38386' 'g38387' 'g38391' 'g38392' 'g38395' 'g38396'
 'g38397' 'g38398' 'g38399' 'g38400' 'g38401' 'g38402' 'g38384' 'g38338'
 'g50139' 'g50150' 'g50182' 'g50146' 'g50161' 'g50077' 'g50159' 'g50164'
 'g50168' 'g50186' 'g50187' 'g50188' 'g50192' 'g21156' 'g21162' 'g21244'
 'g21257' 'g21347' 'g21436' 'g21531' 'g50160' 'g21537' 'g21615' 'g21659'
 'g21679' 'g21702' 'g21705' 'g38381' 'g38382' 'g38383' 'g38411' 'g38412'
 'g38431' 'g38655' 'g38656' 'g50054' 'g21598' 'g38337' 'g38336' 'g38335'
 'g21170' 'g21169' 'g21224' 'g21238' 'g21248' 'g21286' 'g21328' 'g21325'
 'g21348' 'd3097' 'g21855' 'g21852' 'g21858' 'g21259' 'd3101' 'g21901'
 'g21913' 'g21942' 'g21758' 'g21145' 'g21172' 'g21178' 'g21181' 'g21223'
 'g21252' 'g21256' 'g21261' 'g21280' 'g21287' 'g21968' 'g21290' 'g21636'
 'g21671' 'g21153' 'g21254' 'g21266' 'g21282' 'g21639' 'g21364' 'g21401'
 'g21459' 'g21543' 'g21809' 'g21625' 'g21246' 'g21242' 'g21626' 'g21296'
 'g21312' 'g21319' 'g21605' 'g21606' 'g21631' 'g21637' 'g21647' 'g21657'
 'g21660' 'g21689' 'g21696' 'g21753' 'g21792' 'g21796' 'g21806' 'g21603'
 'g38310' 'g38314' 'g38315' 'g38317' 'g38319' 'g38320' 'g38321' 'g38322'
 'g38323' 'g38324' 'g38325' 'g38326' 'g38327' 'g38328' 'g38329' 'g38312'
 'g21597' 'g21596' 'g21593' 'g21326' 'g21330' 'g21346' 'g21353' 'g21365'
 'g21375' 'g21381' 'g21382' 'g21384' 'g21389' 'g21403' 'g21416' 'g21428'
 'g21435' 'g21445' 'g21451' 'g21452' 'g21592' 'g21587' 'g21565' 'g21552'
 'g21548' 'g21541' 'g21917' 'g21539' 'g21526' 'g21520' 'g21480' 'g21463'
 'g21457' 'g21453' 'g21533' 'g21856']
['nd' 'a29bw' 'a2202' 'a28wl' 'a0a3v' 'a1d0txa1dlc' 'a0a3vxa11tc' 'a11tc'
 'a2225' 'a4uet' 'a2dfe' 'a6dl8' 'a1uf9']
['nd' 'comment' 'rna_from_sn_sample']
['nd' 'g36643' 'g36646' 'g36654' 'g36639' 'g36609' 'g36611' 'g36612'
 'g36613' 'g36614' 'g36615' 'g36616' 'g36618' 'g36619' 'g36626' 'g36630'
 'g36631' 'g36632' 'g36633' 'g36624' 'g36608' 'g17954' 'g17953' 'g17956'
 'g17957' 'g17958' 'g17959' 'g36573' 'g17961' 'g17962' 'g17964' 'g26317'
 'g26321' 'g26325' 'g26326' 'g26327' 'g26329' 'g26331' 'g26332' 'g26333'
 'g36575' 'g36577' 'g36578' 'g36579' 'g36580' 'g36574' 'g36593' 'g36595'
 'g36596' 'g36597' 'g36598' 'g36599' 'g36600' 'g36603' 'g36571' 'g26337'
 'g26338' 'g26339' 'g26340' 'g26341' 'g26342' 'g26343' 'g26344' 'g26345'
 'g26346' 'g26350' 'g36567' 'g26357' 'g26356' 'g26355' 'g26353' 'g36563']
['nd' 'eschericha_coli' 'escherichia_coli']
['nd' 'st-420' 'st-95' 'st-144' 'st-69' 'st-349' 'st-73' 'st-10' 'st-2384'
 'st-135' 'st-506' 'st-2200' 'st-127' 'st-131' 'st-48' 'st-751' 'st-1914'
 'st-432' 'st-1099' 'st-5' 'st-648' 'st-3580' 'st-555' 'st-58' 'st-410'
 'st-1611' 'st-1331' 'st-80' 'st-1341' 'st-409']
['nd' 'klebsiella_pneumoniae' 'salmonella_enterica']
['nd' 'st-34' 'st-611' 'st-909' 'st-234' 'st-144' 'st-1714' 'st-429'
 'st-36' 'st-223']
['nd' '3' '2' '1' 3 1]
['nd' 'gsh' 'uh' 'na']
['nd' 'cesarean' 'vaginal']
['nd' 'not_hispanic_or_latino' 'hispanic_or_latino']
['nd' 'white' 'black_or_african_american' 'multiple_races' 'other']
['nd' '2010' '2009' '2011' 2011 2010 2012 2009]
['nd' 'no' 'yes']
['nd' '20' 'na' '10' '27' '7' '39' '34' '13' '12' '17' '30' '25' '19' '35'
 '29' '6' '23' '31' '21' '11' '28' '8' '15' '9']
['nd' 'yes' 'no']
['nd' '970' '1380' '1340' '690' '1246' '630' '880' '1150' '810' '950'
 '750' '830' '620' '900' '680' '1480' '640' '1300' '1350' '890' '920'
 '1100' '925' '860' '1070' '1010' '800' '730' '1210' '790' '1230' '1360'
 '755' '1084' '895' '840' '1130' '1030' '600' '1066' '740' '1049' '1123'
 '1026' 1360 755 1092 559 1030 600 904 601 730 1150 1123 1049 1340 1741
 460 690 680 1460 1210 650 1160 647 830 1230 560 '520' '510' '930' '850'
 '1050' '864' '940' '1020' '540' '820' 800 '760' '814' '1180' '650' '1209'
 '780' '1143' '955' '1060' '1057' '3792' '4173' '3198' '3955' '3341'
 '3820' '3520' '3026' '3287' '2217' '1040' '910' '1080' '415' '959' '980'
 '1170' '973' '1075' '625' '1110' '550' '2897' '4145' '3816' '4060' '2695'
 '3055' '3690' '3475' '3476' '2925' '560' '3936' '3213' 1130 740 580 1040
 820 860 850 770 1350 1070 840 1066 973 1120 1020 955 3955 3026 3816 4145
 1080 814 1075 810 1209 3198 760 1260 950 790 780 1010 910 540 1180 1390
 1100 959 1110 750 1060 1300 980 1679 940 970 724 1395 880 1320 2925 3476
 1998 625 520]
['nd' '34' '38' '40' '31' '38.5' '30.5' '33' '37' '32.5' '28' '32' '30.7'
 '39' '36' '36.5' '34.5' '39.5' '35' '33.5' '35.5' '30' 39.0 32.5 37.5
 30.0 34.0 33.5 36.5 31.0 33.0 36.0 34.5 40.0 42.5 28.0 32.0 39.5 33.7
 '27' '29' 30.5 '31.5' '37.5' 35.0 '54.5' '56' '50.5' '55' '0' '51' '50'
 '49.5' '27.5' '48' '52' '51.5' '53.3' '53' 37.0 35.5 31.5 55.0 50.0 51.5
 52.0 50.5 43.5 41.5 38.0 53.0 45.0]
['nd' 'yes' 'no']
['nd' '1-3_days' '7-14_days' '0_days' '4-6_days']
['nd' 'abx_00-03days' 'abx_04-14days']
['nd' 'yes' 'no']
['nd' 'no' 'yes']
['nd' 'yes' 'no' 'mixed' 'mixed,_yes' 'no,_yes' 'mixed,_no'
 'mixed,_no,_yes']
['nd' '33' '19' '20' '25' '31' '29' '23' '39' '38' '30' '21' '34' '22'
 '24' '32' '35' '27' '37' '28' '26' '18' 28 26 33 34 31 18 19 25 38 29 40
 23 '36' 32 37 '44' 39 21 17 36 30 44 20 22 24 27 35]
['nd' 'bin03_sdhigh' 'bin01_sdlow' 'bin02_sdave']
['nd' '3' '2' '4' '7' '1' '6' '5' 2 1 6 9 7 3 5 4 8]
['nd' 'aa' 'ga' 'gg']
['nd' 'aa' 'ga' 'gg']
['nd' 'no' 'yes']
['nd' 'yes' 'no']
['nd' 'yes' 'no']
['nd' 'yes' 'no' 'unknown']
['nd' '3' '1' '2' '6' '12' '4' '11' '5' '10' '9' '8' 1 3 9 2 11 7 4 8 5
 '7' 6]
['nd' 'no' 'yes']
['nd' 'yes' 'no']
['nd' 'no' 'yes']
['nd' 'no' 'yes']
['nd' 'no' 'yes']
['nd' 'no' 'yes']
['nd' 'na' '0' '3' '2']
['nd' '2' '7' '8' '12' '0' '3' '6' '11' '4' '5' '14' '9' 3 7 0 2 11 4 9 1
 12 10 '1' '10' 5 6 8 14]
['nd' '1' '2' 2 1 '1t' '3' 3]
['nd' '700021131' '700023864' '700023815' '700023807' '700023823'
 '700023813' '700023809' '700023701' '700023728' '700023727' '700023726'
 '700023720' '700023719' '700023718' '700023717' '700023870' '700023716'
 '700023714' '700023712' '700023710' '700023709' '700023706' '700023699'
 '700023695' '700023693' '700023634' '700023551' '700023556' '700023549'
 '700023545' '700023543' '700023715' '700023346' '700023872' '700023919'
 '700024398' '700024410' '700024407' '700024400' '700024296' '700024305'
 '700024301' '700024299' '700024295' '700024201' '700024199' '700024195'
 '700024192' '700024095' '700023880' '700024085' '700024091' '700024089'
 '700024086' '700024042' '700024027' '700024036' '700024033' '700024029'
 '700024024' '700023933' '700023929' '700023927' '700023924' '700021133'
 '700023345' '700023343' '700021304' '700021303' '700021302' '700021301'
 '700021300' '700015863' '700015869' '700015922' '700015940' '700015946'
 '700015958' '700015964' '700015967' '700015976' '700021305' '700016456'
 '700016464' '700016542' '700021297' '700016563' '700016715' '700016764'
 '700016782' '700016788' '700016800' '700016960' '700016978' '700016984'
 '700016996' '700021128' '700016462' '700023344' '700021306' '700021138'
 '700023341' '700023340' '700023338' '700023337' '700023336' '700023245'
 '700023237' '700023232' '700023229' '700023227' '700023121' '700023131'
 '700023130' '700023129' '700021311' '700023128' '700023126' '700023124'
 '700023122' '700023120' '700023119' '700023118' '700023113' '700021901'
 '700021902' '700021677' '700021312' '700021807' '700021685' '700021683'
 '700023127' '700016554' 700114120 '700015857' 700101521 700101523
 700101527 700101515 700101533 700101574 700101359 700101581 700101593
 700101589 700101595 700101840 700101848 700101852 700101587 700101858
 700101355 700101353 700100533 700100540 700100546 700100552 700100600
 700100606 700101347 700100608 700101224 700101230 700101232 700101236
 700101242 700101283 700100612 700100489 700101846 700101855 700103672
 700107048 700102307 700107195 700105215 700107040 700106223 700038587
 700103610 700106284 700106278 700102374 700106602 700105263 700106608
 700101854 700103662 700109242 700101911 700101897 700101903 700101905
 700101909 700101912 700106291 700105358 700106121 700107197 700105739
 700038581 700107396 700105213 700106876 700100483 700100479 700100477
 '700015428' '700015394' '700015245' '700015242' '700015233' '700015215'
 '700015434' '700015203' '700015179' '700014917' '700014913' '700014911'
 '700014832' '700014797' '700015197' '700014791' '700015550' '700015756'
 '700015784' '700015113' '700014445' '700013736' '700013733' '700013727'
 '700015577' '700013723' '700013715' '700033130' '700033042' '700016608'
 '700016136' '700015979' '700013721' '700014785' '700014776' '700014767'
 700100235 700100239 700100245 700100248 700100293 700100299 700100233
 700100301 700100419 700100425 700100431 700100413 700100421 700100471
 700100305 700100227 700099892 700099907 '700014749' '700014737'
 '700014731' '700014718' '700014555' 700099520 700099524 700099745
 700099803 700099811 700099815 700099809 700099886 700099894 700099898
 '700024408' '700024448' '700032243' '700024452' 700037593 700037595
 700037596 700037597 700037598 700037599 700037600 700037601 700037686
 700037690 700037692 700037696 700037689 700037700 700037798 700037800
 700037804 700038072 700038071 700038068 700038062 700038058 700038021
 700037591 700037868 700037860 700037858 700037857 700037814 700037813
 700037810 700037862 700038056 700037590 700037538 700037251 700037239
 700037252 700037438 700037440 700037444 700037447 700037450 700037453
 700037486 700037487 700037490 700037493 700037495 700037496 700037497
 700037498 700037535 700037548 700037544 700037542 700037539 700037587
 700037501 700037500 700037499 700037534 700038126 700038231 700038343
 700097709 700097696 700097706 700097837 700097843 700097845 700097849
 700097858 700097855 700097906 700097912 700097914 700097918 700097927
 700098429 700098435 700098437 700099306 700099288 700098690 700098681
 700098677 700098675 700097700 700098669 700098550 700098548 700098542
 700098554 700098450 700098441 700098560 700097694 700097688 700097183
 700095485 700095479 700095475 700095473 700095234 700095231 700095467
 700095225 700095219 700095213 700038354 700038352 700038346 700038348
 700095221 700037245 700095481 700095647 700097177 700097195 700097189
 700097185 700096361 700096379 700095482 700096373 700096367 700095665
 700095668 700095659 700095655 700095653 700096369 '700024449' 700037241
 700037126 '700024955' '700024960' '700024958' '700024964' '700024966'
 '700032006' '700032012' '700032024' '700032086' '700032222' '700032228'
 '700032230' '700032240' '700032234' '700033559' '700033377' '700032925'
 '700032943' '700032937' '700032931' '700024908' '700032324' '700032337'
 '700032334' '700032328' '700032322' 700109389 '700032316' '700033502'
 '700024857' '700024863' '700024454' '700024458' '700024492' '700024545'
 '700024548' '700024550' '700024554' '700024592' '700024596' '700024602'
 '700024593' '700024640' '700024644' '700024651' '700024638' '700024646'
 '700024859' '700024854' '700024851' '700024740' '700024737' '700024732'
 '700024846' '700024749' '700024743' '700024689' '700024698' '700024694'
 '700024692' '700024688' '700024745' '700033520' '700033526' 700033538
 700034925 700034907 700034921 700034922 700035514 700035521 700035522
 700035527 700035734 700035746 700035728 700035736 700035740 700035785
 700035791 700035793 700035803 700037138 700037132 700037128 700037123
 700037034 700037031 700034919 700037042 700037036 700035860 700035850
 700035848 700035842 700035797 700037040 700034915 700034913 700034778
 700033922 700033850 700033832 700033820 700033814 700033796 700016468
 700033718 700033688 700033682 700033571 700033567 700033565 700033556
 700033700 700037141 700033988 700034172 700034772 700034793 700034790
 700034784 700034780 700034240 700034166 700034238 700034253 700034244
 700034187 700034184 700034178 700034174 700034232 700103671 700106615
 700038583 '700112763' '700016692' '700119042' '700015702' '700119999'
 700102299 '700033136' '700112761' '700119751' '700035943' '700109569'
 '700119583' '700102242' '700099014' '700015131' '700119173' '700119747'
 '700108857' '700102254' '700120060' '700015299' '700108542' '700099745'
 '700109629' '700107375' '700112767' '700123570' '700123568' '700112052'
 '700108169' '700108167' '700112388' '700112384' '700107881' '700111296'
 '700111586' '700119568' '700111044' '700110437' '700110593' '700098878'
 '700123848' '700110830' '700098121' '700122177' '700122173' '700122171'
 '700096053' '700122114' '700108551' '700107885' '700119171' '700102525'
 '700110173' '700095962' '700120753' '700122108' '700109449' '700120055'
 '700014954' '700108536' '700102659' '700098365' '700166775' '700122165'
 '700109621' '700109987' '700096865' '700032132' '700107546' '700119987'
 '700119739' '700119562' '700111222' '700108095' '700109563' '700035937'
 '700109627' '700112508' '700119995' '700033454' '700119993' '700112054'
 '700112498' '700015176' '700109642' '700119745' '700112496' '700097637'
 '700123827' '700122186' '700123562' '700096700' '700102043' '700111505'
 '700097240' '700120759' '700112064' '700119063' '700123959' '700108103'
 '700119165' '700123583' '700166783' '700120768' '700120761' '700122116'
 '700102317' '700110833' '700122180' '700108853' '700166796' '700166793'
 '700166787' '700120771' '700108548' '700123580' '700123576' '700123577'
 '700108116' '700108109' '700108107' '700108101' '700034250' '700034093'
 '700112058' '700108545' '700108179' '700112770' '700112773' '700034850'
 '700122120' '700108847' '700108538' '700123574' '700120765' '700112769'
 '700107207' '700123977' '700123973' '700123971' '700123967' '700123965'
 '700123841' '700123842' '700123835' '700123833' '700122183' '700123980'
 '700108173' '700032933' '700112394' '700119753' '700119754' '700100618'
 '700119580' '700119577' '700119574' '700119570' '700015155' '700015149'
 '700015137' '700016818' '700119183' '700119180' '700119177' '700015287'
 '700015281' '700015269' '700015263' '700035237' '700108851' '700108845'
 '700119179' '700120097' '700120063' '700120066' '700107891' '700107887'
 '700107888' '700120005' '700120001' '700109639' '700109635' '700109636'
 '700109633' '700112504' '700112505' '700112502' '700109581' '700109577'
 '700109575' '700109571' '700119056' '700119057' '700119048' '700107396'
 '700107389' '700107390' '700107383' '700166781' '700112382' '700119050'
 '700096047' 700106446 700106061 700038805 700106440 700102356 700106130
 700106818 700106809 700103608 700038869 700109404 700103620 700105219
 700038863 700109238 700105355 700103446 700038806 700107046 700038397
 700106805 700038445 700106436 700099512 700109391 700102606 700106070
 700105209 700106065 700106652 700106124 700038815 700106437 700102421
 700102368 700106433 700106132 700109395 700038750 700106860 700106656
 700038802 700106229 700038741 700107375 700103617 700106074 700106862
 700038744 700106221 700038759 700106442 700107058 700038437 700103656
 700107052 700106866 700106663 700105580 700038391 700106659 700102364
 700105738 700110427 700103658 700110161 700038594 700110419 700106430
 700107201 700106126 700038859 700103614 700110425 700106175 700105364
 700106808 700102425 700038593 700106280 700102585 700038392 700107189
 700105370 700106176 700038395 700110167 700105268 700110431 700106875
 700102591 700106018 700109236 700106181 '700108839' 700105266 700038870
 700106614 700106068 700038756 700110176 700103439 700109251 700102305
 700114599 700114428 700114063 700111034 700110824 700114601 700114050
 700110833 700111026 700114442 700114440 700113608 700114431 700111997
 700114105 700111038 700114114 700114615 700111991 700114605 700114110
 700114057 700114337 700114614 700110820 700106227 '700112490' '700108530'
 '700112046' '700108161' '700120008' '700112376' '700107879' '700107873'
 '700112755' 700119517 700119502 700119496 700119063 700119050 700119048
 700119042 700112833 700112824 700112820 700112818 700112812 700114055
 700114123 700114438 700099518 700113604 700102419 700038857 700109383
 700103433 700105732 700106650 700038811 700105735 700110163 700106290
 700110155 700106814 700106064 700103621 700038809 700105274 700103668
 700107383 700109230 700102362 700105272 700110818 700106237 700106179
 700106812 700102311 700114441 700114052 700106294 700114109 700114328
 700110812 700114333 700111032 700114429 700113602 700114434 700112003
 700113599 700038401 700102413 700105210 700105726 700038590 700106118
 700105360 700102371 700114066 700038746]
['nd' '1' 1 '2']
['nd' '2840' '2848' '2849' '2878' '3093' '2896' '2971' '3014' '3132'
 '2880' '2828' '2741' '2764' '2758' '2752' '2723' '2668' '2661' '2638'
 '2535' ' -' '3134' '1253' '2772' '3135' '4198' '3303' '1196' '4961'
 '4328' '4096' '1122' '5066' '4508' '4168' '4141' '4112' '3958' '3852'
 '3751' '3646' '3587' '3549' '3185']
['nd' '0' '3' '5' '4' ' -' '1' '2']
['nd' 'watery' 'smooth' 'bloody' 'unknown' ' -' '-']
['nd' '5' '4' '2' '1' '6' '7' '8' '3' ' -' '10' '-' '26' '20' '14' '12'
 '19']
['nd' 'no' 'yes' ' -' '-']
['nd' 'high' 'low' 'moderate' ' -' '-']
['nd' 'positive' 'negative' ' -' '-']
['nd' '11' '10.9' '10.6' '12.6' '30.2' '11.9' '16.8' '19' '27' '11.7' '9'
 '7.5' '10.3' '9.6' '9.4' '38' '24.9' '30.8' '55' ' -' '15.4' '82.4'
 '20.1' '13.3' '11.6' '73.6' '12.5' '13.82' '12.7' '18.74' '17.7' '12.1'
 '17.5' '8' '10.5' '110' '8.7' '8.6' '19.4' '14.5' '21.6' '82.8' '15.2'
 '14.1' '15.3' '14.6' '14.2' '93' '11.81']
['nd' '78' '>99' '31' '35' '69' '40' '19' '99' '15' '32' ' -' '29' '9' '0'
 '6' '67.51' '33.04' '33' '21' '90' '36' '46' '1.86']
['nd' '39' '3' '11' '2' '<1' '22' '19' '5' '17' '4' '9' '29' '619' ' -'
 '7' '-' '16' '6' '1' '10' '8']
['nd' 'yes' 'no' ' -' '-']
['nd' '1' '0.4' 'na' '13' '8' '2' '3' '5' ' -' '-' '0.5']
['nd' 'yes' 'no' ' -' '-']
['nd' 'negative' '0.0009' '0.0014' ' -' '0.0036' 'positive' '0.0006'
 '0.0069' '0.0037' '0.0041' '0.004']
['n' 'y' 'nd']
['nd' '386' '91' '354' '196' '6' '341' '489' '408' '21' '77' '556' '665'
 '658' '76' '644' '920' '555' '895' '899' '615' '793' '539' '872' '495'
 '414' '0' '552' '573' '478' '477' '547' '463' '522' '462' '461' '407'
 '458' '409' '502' '746' '499' '490' '69' '519' '607' '601' '517' '596'
 '505' '587' '747' '890' '677' '739' '725' '651' '645' '624' '600' '231'
 '617' '678' '940' '576' '423' '776' '421' '455' '553' '270' '264' '263'
 '928' '243' '902' '926' '520' '884' '885' '249' '881' '230' '86' '671'
 '320' '779' '313' '223' '476' '311' '325' '673' '643' '272' '954' '861'
 '898' '537' '434' '510' '332' '543' '922' '602' '523' '810' '424' '229'
 '395' '472' '345' '339' '544' '427' '449' 'na' '540' '512' '422' '497'
 '513' '511' '532' '536' '447' '525' '435' '526' '529' '433' '436' '516'
 '430']
['nd' 'na' 'dfmp']
['nd' '39' '196' '87' '80' '183' '35' '164' '152' '240' '159' '117' '125'
 '236' '135' '194' '195' '133' '209' '169' '84' '138' '307' '127' '234'
 '83' '126' '85' '182' '221' '69' '46' '178' '106' '175' '60' '49' '76'
 '167' '64' '148' '179' '217' '128' '122' '105' '118' '172' '119' '137'
 '134' '208' '170' '160' '156' '192' '207' '197' '115' '201' '187' '193'
 '123' '223' '154' '139' '104' '222' '274' '99' '124' '161' '229' '202'
 '58' '184' '168' '162' '190' '158' '165' '141' '101' '220' '215' '136'
 '144' '89' 'na' '237' '232' '199' '153' '107' '166' '218' '146' '62'
 '131' '112' '219' '205' '145' '33' '114' '103' '147' '67' '213' '230'
 '54' '61' '111' '174' '98' '100' '188' '142' '81' '113' '130' '155' '129'
 '216' '102' '173' '227' '82' '50' '151' '224' '163' '211' '185' '235'
 '140' '212' '143' '92' '177' '255' '203' '186' '204' '214' '109' '198'
 '206' '228' '157' '94' '88' '72' '171' '44' '180' '132' '93' '41' '95'
 '264' '176' '191' '242' '149' '150' '181']
['nd' 'na' 'o2_uc60' 'o2_uc55' 'o2_uc9' 'o2_uc58' 'o2_uc59' 'o2_uc56'
 'o2_uc57' 'v1_cd25' 'v1_cd15' 'o2_uc54' 'v1_cd21' 'v1_cd18' 'v1_cd17'
 'o2_uc34' 'o2_uc53' 'o2_uc40' 'o2_uc38' 'o2_uc37' 'o2_uc36' 'o2_uc35'
 'o2_uc3' 'o2_uc32' 'o2_uc31' 'o2_uc30' 'o2_uc4' 'o2_uc41' 'o2_uc5'
 'o2_uc52' 'o2_uc51' 'o2_uc50' 'o2_uc49' 'o2_uc48' 'o2_uc47' 'o2_uc46'
 'o2_uc44' 'o2_uc43' 'v1_uc52' 'v1_cd35' 'v1_uc4' 'v1_uc35' 'v1_uc3'
 'v1_uc49' 'o2_uc29' 'v1_uc55' 'v1_uc5' 'v1_uc53' 'v1_uc51' 'v1_uc31'
 'v1_uc13' 'v1_uc12' 'v1_uc11' 'v1_uc10' 'v1_cd7' 'v1_cd6' 'v1_uc15'
 'v1_uc26' 'v1_uc2' 'v1_uc23' 'v1_uc17' 'o2_uc27' 'o2_uc2' 'o2_uc1'
 'o2_uc12' 'o2_uc11' 'o2_uc13' 'o2_uc14' 'o2_uc26' 'o2_uc24' 'o2_uc23'
 'o2_uc22' 'o2_uc21' 'o2_uc20' 'o2_uc19' 'o2_uc18' 'o2_uc17' 'o2_uc16']
['nd' 'white' 'unknown']
['nd' '9c' '13c' '10d' '10c' '2c' '13d' '15a' '4a' '3c' '22b' '21d' '21c'
 '21b' '3b' '20d' '20c' '20b' '20a' '19d' '19c' '19b' '14c' '19a' '3a'
 '18b' '18a' '17d' '17c' '17b' '17a' '16d' '16c' '16b' '16a' '15d' '15c'
 '15b' '18d' '9d' '10a' '1d' '1c' '1b' '1a' '11ap' '11bp' '11cp' '11dp'
 '4b' '4c' '4d' '5a' '5b' '5c' '6a' '6b' '2a' '6d' '7a' '7b' '7c' '7d'
 '8a' '8b' '8d' '9a' '2b' '9b' '5d' '10b']
['nd' 's504' 's505' 's502' 's508' 's507' 's506' 's501' 's503']
['nd' 'n707' 'n703' 'n712' 'n711' 'n704' 'n709' 'n702' 'n710' 'n706'
 'n708' 'n705' 'n701']
['nd' '9c' '13c' '10d' '10c' '2c' '13d' '15a' '4a' '3c' '22b' '21d' '21c'
 '21b' '3b' '20d' '20c' '20b' '20a' '19d' '19c' '19b' '14c' '19a' '3a'
 '18b' '18a' '17d' '17c' '17b' '17a' '16d' '16c' '16b' '16a' '15d' '15c'
 '15b' '18d' '9d' '10a' '1d' '1c' '1b' '1a' '11ap' '11bp' '11cp' '11dp'
 '4b' '4c' '4d' '5a' '5b' '5c' '6a' '6b' '2a' '6d' '7a' '7b' '7c' '7d'
 '8a' '8b' '8d' '9a' '2b' '9b' '5d' '10b']
['nd' '2,14' '3' '1,98' '2,39' '1,21' '0,447' '1,33' 'tl' '1,94' '2,57'
 '0,253' '0,6' '1,04' '0,386' '1,12' '1,81' '2,27' '1,73' '0,466' '2,5'
 '0,764' '0,575' '0,054' '0,388' '3,36' '0,208' '4,58' '0,688' '2,84'
 '1,7' '1,09' '2,28' '0,059' '2,51' '1,48' '3,02' '2,05' '2,26' '3,67' '2'
 '0,261' '0,131' '0,158' '2,09' '2,32' '3,68' '2,89' '0,141' '1,77' '1,97'
 '2,31' '1,96' '0,282' '1,86' '0,525' '1,71' '0,057' '0,689' '3,09' '3,21'
 '0,709']
['nd' 'steph_b2_31_ctctctac-agagtaga' 'steph_b2_39_aggcagaa-gtaaggag'
 'steph_b2_36_gtagagga-agagtaga' 'steph_b2_35_aagaggca-agagtaga'
 'steph_b2_3_aggcagaa-ctctctat' 'steph_b2_40_tcctgagc-gtaaggag'
 'steph_b2_45_gctacgct-gtaaggag' 'steph_b2_9_gctacgct-ctctctat'
 'steph_b2_7_ctctctac-ctctctat' 'steph_b2_74_cgtactag-ctaagcct'
 'steph_b2_72_gtagagga-aaggagta' 'steph_b2_71_aagaggca-aaggagta'
 'steph_b2_70_cgaggctg-aaggagta' 'steph_b2_6_taggcatg-ctctctat'
 'steph_b2_68_cagagagg-aaggagta' 'steph_b2_67_ctctctac-aaggagta'
 'steph_b2_66_taggcatg-aaggagta' 'steph_b2_65_ggactcct-aaggagta'
 'steph_b2_64_tcctgagc-aaggagta' 'steph_b2_63_aggcagaa-aaggagta'
 'steph_b2_62_cgtactag-aaggagta' 'steph_b2_43_ctctctac-gtaaggag'
 'steph_b2_61_taaggcga-aaggagta' 'steph_b2_5_ggactcct-ctctctat'
 'steph_b2_58_cgaggctg-actgcata' 'steph_b2_57_gctacgct-actgcata'
 'steph_b2_56_cagagagg-actgcata' 'steph_b2_55_ctctctac-actgcata'
 'steph_b2_54_taggcatg-actgcata' 'steph_b2_53_ggactcct-actgcata'
 'steph_b2_52_tcctgagc-actgcata' 'steph_b2_51_aggcagaa-actgcata'
 'steph_b2_50_cgtactag-actgcata' 'steph_b2_49_taaggcga-actgcata'
 'steph_b2_48_gtagagga-gtaaggag' 'steph_b2_47_aagaggca-gtaaggag'
 'steph_b2_46_cgaggctg-gtaaggag' 'steph_b2_60_gtagagga-actgcata'
 'steph_b2_32_cagagagg-agagtaga' 'steph_b2_33_gctacgct-agagtaga'
 'steph_1_aggcagaa-tagatcgc_l006' 'steph_2_tcctgagc-tagatcgc_l006'
 'steph_3_ggactcct-tagatcgc_l006' 'steph_4_taggcatg-tagatcgc_l006'
 'steph_5_ctctctac-tagatcgc_l006' 'steph_6_cagagagg-tagatcgc_l006'
 'steph_7_taaggcga-ctctctat_l006' 'steph_8_cgtactag-ctctctat_l006'
 'steph_b2_10_cgaggctg-ctctctat' 'steph_b2_11_aagaggca-ctctctat'
 'steph_b2_12_gtagagga-ctctctat' 'steph_b2_13_taaggcga-tatcctct'
 'steph_b2_14_cgtactag-tatcctct' 'steph_b2_15_aggcagaa-tatcctct'
 'steph_b2_17_ggactcct-tatcctct' 'steph_b2_18_taggcatg-tatcctct'
 'steph_b2_1_taaggcga-ctctctat' 'steph_b2_20_cagagagg-tatcctct'
 'steph_b2_21_gctacgct-tatcctct' 'steph_b2_22_cgaggctg-tatcctct'
 'steph_b2_23_aagaggca-tatcctct' 'steph_b2_24_gtagagga-tatcctct'
 'steph_b2_25_taaggcga-agagtaga' 'steph_b2_26_cgtactag-agagtaga'
 'steph_b2_28_tcctgagc-agagtaga' 'steph_b2_29_ggactcct-agagtaga'
 'steph_b2_2_cgtactag-ctctctat' 'steph_b2_30_taggcatg-agagtaga'
 'steph_b2_16_tcctgagc-tatcctct' 'steph_b2_34_cgaggctg-agagtaga']
['nd' '14760038' '17583790' '18596616' '16941790' '13544362' '19706278'
 '15546056' '15301044' '12002488' '13845606' '20615142' '16446126'
 '13497488' '15895492' '18795564' '13655680' '21731568' '20654972'
 '17672600' '14114066' '17483726' '13087612' '20618408' '7525294'
 '23526606' '18941816' '7843972' '18660256' '14665822' '10296084'
 '18571760' '22732860' '21256020' '11999718' '15925386' '10969440'
 '15031934' '19793078' '19638664' '15430266' '29119636' '25988980'
 '26799156' '27486984' '25653734' '16751638' '27726714' '26217324'
 '16214048' '15312740' '17633996' '16554232' '18577818' '21948934'
 '20049520' '14183612' '12231074' '13597260' '15336646' '15863898'
 '25371790' '19145756' '21280240' '15960492' '19155042' '13276938'
 '22121046' '14371040' '20381680' '19327782']
['nd' '13582386' '16735482' '17294128' '15770716' '12698760' '18520686'
 '14682962' '14386960' '11339538' '12755480' '19237980' '15312008'
 '12672174' '14777134' '17757960' '12905462' '20046102' '19485238'
 '16764020' '13206284' '16466688' '12151700' '19551712' '6990074'
 '21428454' '17218246' '7353516' '17155074' '13739830' '9737570'
 '16051058' '21317968' '20114124' '11416510' '14962622' '10271598'
 '14053498' '18578454' '18278412' '14495850' '27207474' '24822000'
 '25258266' '25812790' '23435278' '15343480' '25992462' '24585888'
 '15230508' '14112620' '14994126' '15358614' '17446796' '20660252'
 '18437344' '12781342' '11632286' '12612020' '14537758' '14996658'
 '23618768' '17684918' '19789250' '14842178' '17713544' '11927320'
 '20823344' '13298112' '18880874' '17965282']
['nd' '50115' '140215' '86209' '423799' '20548' '1102055' '422757'
 '3636180' '17344' '106485' '594316' '85713' '2643403' '134909' '38564'
 '482224' '9437730' '202642' '206109' '3161095' '4584566' '48865'
 '6386760' '76946' '20660516' '14696479' '173849' '4344065' '80664'
 '2199691' '10322010' '57586' '8140379' '2857153' '1222010' '1131117'
 '700158' '662963' '81880' '7568839' '97206' '97001' '1203448' '322827'
 '21789990' '13486694' '90911' '79001' '2016820' '541206' '7950063'
 '4413343' '320716' '36240' '104956' '9909075' '480108' '4264446' '909262'
 '4558560' '50549' '94196' '169440' '124172' '85246' '7462031' '5293360'
 '3225039' '54772' '616534']
['nd' '50113' '140212' '86208' '423797' '20543' '1102055' '422757'
 '3636180' '17343' '106476' '594312' '85711' '2643402' '134906' '38562'
 '482223' '9437726' '202640' '206109' '3161094' '4584564' '48859'
 '6386760' '76943' '20660504' '14696475' '173848' '4344062' '80663'
 '2199691' '10322007' '57584' '8140376' '2857152' '1222007' '1131117'
 '700157' '662960' '81880' '7568839' '97206' '97001' '1203446' '322826'
 '21789989' '13486694' '90911' '79000' '2016819' '541202' '7950037'
 '4413343' '320712' '36240' '104953' '9909073' '480107' '4264445' '909261'
 '4558556' '50547' '94191' '169440' '124171' '85246' '7462021' '5293360'
 '3225039' '54765' '616534']
['nd' '50066' '139792' '86166' '423738' '20450' '1101517' '422748'
 '3635975' '17343' '106452' '589094' '85127' '2642133' '134897' '38513'
 '479129' '9437144' '202531' '206067' '3152255' '4584001' '48839'
 '6386372' '76943' '20660189' '14696104' '172561' '4342678' '80613'
 '2199691' '10320856' '57547' '8140341' '2857127' '1215985' '1131069'
 '700123' '657681' '81835' '7568153' '97206' '97001' '1203446' '322826'
 '21789989' '13486694' '90911' '79000' '2016642' '541139' '7950020'
 '4413307' '320706' '36233' '104942' '9908890' '480104' '4259971' '909257'
 '4558539' '50540' '94181' '168959' '124161' '85208' '7462016' '5293087'
 '3225031' '54759' '616387']
['nd' '0,34' '0,80' '0,46' '2,50' '0,15' '5,59' '2,72' '23,76' '0,14'
 '0,77' '2,86' '0,52' '19,57' '0,85' '0,20' '3,51' '43,43' '0,98' '1,17'
 '22,33' '26,22' '0,37' '30,97' '1,02' '87,82' '77,59' '2,20' '23,27'
 '0,55' '21,36' '55,57' '0,25' '38,30' '23,81' '7,64' '10,31' '4,66'
 '3,32' '0,42' '49,05' '0,33' '4,49' '84,94' '80,51' '0,30' '12,44' '3,53'
 '45,08' '26,66' '1,73' '0,17' '69,86' '3,93' '31,33' '5,93' '28,74'
 '0,49' '0,79' '0,78' '0,44' '56,20' '23,93' '22,44' '0,27' '3,19']
['nd' '0,37' '0,84' '0,50' '2,69' '0,16' '5,95' '2,88' '25,27' '0,15'
 '0,83' '3,06' '0,56' '20,85' '0,91' '0,22' '3,71' '47,08' '1,04' '1,23'
 '23,87' '27,84' '0,40' '32,66' '1,10' '96,41' '85,35' '2,35' '25,31'
 '0,59' '22,59' '64,30' '0,27' '40,47' '25,03' '8,13' '11,01' '4,98'
 '3,54' '0,45' '52,21' '0,36' '0,39' '4,76' '1,25' '92,98' '87,90' '0,35'
 '0,32' '13,24' '3,83' '53,02' '28,74' '1,84' '0,18' '0,57' '77,53' '4,13'
 '33,78' '6,25' '30,40' '0,21' '0,53' '0,85' '0,48' '62,56' '25,42'
 '24,25' '0,29' '3,43']
['nd' 'c' 'd' 'a' 'b']
['nd' 'p']
['nd' '9cp' '13cp' '10dp' '10cp' '2cp' '13dp' '15ap' '4ap' '3cp' '22bp'
 '21dp' '21cp' '21bp' '3bp' '20dp' '20cp' '20bp' '20ap' '19dp' '19cp'
 '19bp' '14cp' '19ap' '3ap' '18bp' '18ap' '17dp' '17cp' '17bp' '17ap'
 '16dp' '16cp' '16bp' '16ap' '15dp' '15cp' '15bp' '18dp' '9dp' '10ap'
 '1ap' '1bp' '1cp' '1dp' '11ap' '11bp' '11cp' '11dp' '4bp' '4cp' '4dp'
 '5ap' '5bp' '5cp' '6ap' '6bp' '2ap' '6dp' '7ap' '7bp' '7cp' '7dp' '8ap'
 '8bp' '8dp' '9ap' '2bp' '9bp' '5dp' '10bp']
['nd' '41573' '41625' '41626']
['nd' 'comano' 'trento']
['nd' '9' '13' '10' '2' '15' '4' '3' '22' '21' '20' '19' '14' '18' '17'
 '16' '1' '11' '5' '6' '7' '8']
['nd' '8' '3' '6' '4' '15' '2' '20' '5' '12' '35' 'missing']
['nd' '10' '4' '60' '2' '50' '20' '30' 'missing']
['nd' '70' '40' '20' '30' '50' '41' '45' '35' '5' '42' '18' '39' '33' '56']
['nd' 'no' 'yes']
['nd' 'placche' 'placche_and_inversa']
['nd' 'yes' 'no']
['nd' 'stage_ii' ' -' 'stage_i' 'discovery' 'validation']
['nd' 'y' 'n']
['nd' 'n' 'y']
['nd' 'n' 'y']
['nd' 'autoimmune_related' 'hepatitis_e_virus_related' 'n'
 'hepatitis_d_virus_related' 'schistosoma_related'
 'schistosoma?hepatitis_e_virus_and_autoimmune_related'
 'schistosoma?hepatitis_e_virus_related' 'drug_related'
 'hepatolenticular_degeneration_related' 'hepatitis_c_virus_related'
 'primary_biliary_cirrhosis_&_autoimmune_related']
['nd' '1.46' '1.65' '1.1' '1.49' '1.11' '1.7' '1.08' '1.62' '1.19' '1.41'
 '1.91' '1.02' '1.3' '1.23' '1.42' '2.16' '1.32' '1.33' '1.6' '1.39'
 '1.04' '1.2' '1.14' '1.48' '1.22' '1.4' '0.99' '1.25' '1.09' '-' '1.15'
 '1.13' '1.31' '1.17' '1.75' '1.96' '1.35' '1.78' '2.35' '1.87' '1.43'
 '1.34' '1.45' '1.77' '1.44' '0.96' '0.92' '1.64' '2.05' '1.01' '1.05'
 '1.21' '1.28' '1.18' '2.1' '1.67' '1.16' '1.47' '1.69' '1.26' '1.8'
 '1.07' '1.58' '1.36' '1.71' '1.56']
['nd' '70' '58' '61' '69' '72' '54' '68' '62' '94' '60' '50' '66' '63'
 '49' '57' '43' '84' '55' '30' '39' '64' '59' '36' '53' '76' '78' '79'
 '74' '98' '51' '46' '48' '95' '52' '44' '47' '77' '87' '85' '42' '81'
 '82' '71' '97' '65' '73' '106' '75' '40' '67' '38' '129' '163' '104'
 '114' '88' '117' '41' '32' '45' '37' '83' '89' '86' '80']
['nd' '23.9' '15.2' '30.9' '20.7' '34.6' '25.5' '29.4' '34.1' '42.6'
 '35.2' '39.7' '43.8' '37.3' '34.4' '43.5' '25.9' '27.4' '36.7' '33.6'
 '25.8' '23.4' '38.1' '39.2' '42.2' '29.7' '22.9' '32.3' '36.2' '31.7'
 '28.6' '43.7' '49.2' '27.6' '52.5' '51.2' '49.7' '49' '47.3' '48.6'
 '53.6' '48.9' '44.1' '50.5' '49.4' '41.6' '48.7' '48' '46.4' '49.6'
 '37.5' '43.2' '41.5' '40.3' '29.8' '47.2' '52.8' '45.8' '53.2' '46.1'
 '42.1' '54.5' '31' '22.3' '17.7' '34.5' '23.7' '40.7' '37.1' '34.7'
 '35.1' '50' '27.3' '18.6' '37.9' '36' '35.3' '28.9' '18.8' '38.9' '36.8'
 '25' '32.5' '24.6' '22' '44.2' '46.2' '36.1' '38.4' '33.5' '36.6' '31.1'
 '31.2' '30.4' '35' '24.1' '34.8' '43.3' '30.2' '39.4' '33.8' '36.3'
 '42.8' '29.2' '43.6' '29.1' '29.6' '25.1' '40.9' '30.3' '31.3' '44.8'
 '28.3' '24.3' '47.4' '51.1' '43.9' '45.6' '48.2' '48.3' '52.1' '47.9'
 '50.9' '42.4' '46.5' '52' '49.1' '52.3' '50.3' '47' '51.9' '54.3' '53.4'
 '48.5' '49.3' '44.5' '47.5' '49.9' '48.1' '51.4' '50.8' '46.3' '51.7'
 '45' '46.7' '57.6' '46.9' '47.8' '45.9' '42.7' '54.1' '50.2' '50.4'
 '53.8' '44.3' '50.1' '45.4']
['nd' '23' '87' '12' '39' '25' '106' '49' '347' '11' '580' '37' '55' '13'
 '21' '131' '18' '59' '96' '54' '124' '20' '16' '22' '90' '33' '34' '56'
 '32' '27' '9' '7' '10' '8' '15' '75' '14' '17' '35' '83' '183' '91' '99'
 '44' '107' '36' '24' '311' '597' '5' '26' '28' '401' '585' '50' '176'
 '71' '73' '30' '108' '118' '125' '98' '70' '72' '58' '6' '19' '29']
['nd' '17' '19.4' '12.7' '17.4' '12.8' '20' '12.4' '19' '13.8' '16.4'
 '22.6' '11.8' '15.2' '13.7' '14.3' '16.6' '15.3' '18.8' '15.9' '16.2'
 '12' '13.2' '16.9' '14' '16.3' '11.4' '17.7' '12.6' '-' '14.2' '13.1'
 '17.3' '13.3' '13.6' '15.4' '13.5' '14.7' '20.1' '23.3' '21' '15' '27'
 '11.9' '11.6' '17.1' '21.2' '22.2' '11' '18.7' '19.6' '15.1' '14.4'
 '23.2' '12.1' '14.1' '14.9' '12.5' '24.2' '15.7' '19.2' '16.8' '13.9'
 '21.3' '18.6' '18.9' '15.5' '17.8' '13.4']
['nd' 'absent' 'sever' 'mild' '-']
['nd' 'none' 'grade_1' '-']
['nd' '7' '12' '6' '8' '9' '5' '13' '10' '-' '14' '11']
['nd' '9.5' '14.1' '2.6' '11.6' '7' '14.5' '8.7' '19.8' '3.3' '14.8'
 '23.4' '-0.6' '8.3' '4.4' '5.5' '18.5' '0.5' '7.4' '17.7' '9.9' '7.2'
 '-0.4' '5.1' '6.9' '7.6' '10.2' '10.1' '4.2' '5.9' '11.8' '9.4' '6.5' '-'
 '5.6' '0.6' '11.1' '0.1' '3.6' '4.5' '0.3' '-0.8' '12.1' '17.2' '21.1'
 '9.1' '3.8' '-0.2' '18.6' '13.2' '7.1' '1.8' '3.2' '9.7' '17.4' '10' '20'
 '7.7' '12.5' '-2.3' '4.1' '-6.1' '15.6' '3.1' '16.8' '7.8' '21.8' '6.6'
 '4.3' '7.3' '1.6' '-4.1' '11.7' '12.6' '2.3' '7.9' '4.7' '14.2' '15.3'
 '13.5' '6.1' '15.9' '6.2' '13.3' '5.4' '4' '3.5' '11.3' '1.3' '13.1'
 '6.8' '12' '11.9' '3.9']
['nd' 'none' 'lamivudine_adefovir' 'telbivudine' 'lamivudine' 'entecavir'
 'lamivudine_foscarnet_sodium' '-' 'adefovir']
['nd' 'none' 'propranolol' '-']
['nd' 'hv09_ch_r_u_ss_sebaceous' 'hv09_al_r_u_ss_sebaceous'
 'hv09_hp_r_u_ss_dry' 'hv09_id_r_u_ss_moist' 'hv09_gb_c_u_ss_sebaceous'
 'hv09_ac_r_u_ss_moist' 'hv09_ea_r_u_sw_sebaceous'
 'broad_mock_fmcv13_u_na_na' 'hv07_ph_r_u_ss_moist'
 'hv07_mb_null_u_ss_sebaceous' 'hv07_gb_null_u_ss_sebaceous'
 'hv07_oc_null_u_ss_sebaceous' 'hv07_tw_r_u_ss_moist'
 'hv07_ba_null_u_ss_sebaceous' 'hv07_ax_r_u_ss_moist'
 'hv07_pc_r_u_ss_moist' 'hv09_vf_r_u_ss_dry' 'baylor_mock_bmcv13_u_na_na'
 'hv09_tw_r_u_ss_moist' 'hv10_ic_r_u_ss_moist' 'hv09_mb_c_u_ss_sebaceous'
 'hv07_ic_r_u_ss_moist' 'hv10_mb_c_u_ss_sebaceous'
 'hv10_ra_r_u_ss_sebaceous' 'hv10_tw_r_u_ss_moist' 'hv10_vf_r_u_ss_dry'
 'hv10_ac_r_u_ss_moist' 'hv10_hp_r_u_ss_dry' 'hv10_id_r_u_ss_moist'
 'hv09_ra_r_u_ss_sebaceous' 'hv10_ea_r_u_sw_sebaceous'
 'hv10_ch_r_u_ss_sebaceous' 'hv10_gb_c_u_ss_sebaceous'
 'hv09_tn_r_u_cut_toenail' 'hv09_pc_r_u_ss_moist'
 'hv09_ba_c_u_ss_sebaceous' 'hv09_oc_c_u_ss_sebaceous'
 'hv09_ph_r_u_ss_moist' 'hv09_ic_r_u_ss_moist' 'hv10_al_r_u_ss_sebaceous'
 'hv07_hp_r_u_ss_dry' 'hv08_vf_l_u_ss_dry' 'hv07_vf_r_u_ss_dry'
 'hv08_ch_r_u_ss_sebaceous' 'hv08_n_l_u_sw_moist' 'hv08_tw_l_u_ss_moist'
 'hv08_al_l_u_ss_sebaceous' 'hv08_hp_l_u_ss_dry' 'hv08_n_r_u_sw_moist'
 'hv08_tw_r_u_ss_moist' 'hv08_al_r_u_ss_sebaceous'
 'hv08_ch_l_u_ss_sebaceous' 'hv08_ic_r_u_ss_moist'
 'hv06_oc_null_u_ss_sebaceous' 'hv06_oc_null_a_ss_sebaceous'
 'hv06_ph_r_u_ss_moist' 'hv06_mb_null_u_ss_sebaceous' 'hv06_hp_r_u_ss_dry'
 'hv06_ra_r_u_ss_sebaceous' 'hv06_ea_r_u_sw_sebaceous'
 'hv06_al_r_u_ss_sebaceous' 'hv08_hp_r_u_ss_dry' 'hv07_ac_r_u_ss_moist'
 'hv08_pc_l_u_ss_moist' 'hv08_ra_l_u_ss_sebaceous'
 'hv07_ra_r_u_ss_sebaceous' 'hv07_ea_r_u_sw_sebaceous'
 'hv07_al_r_u_ss_sebaceous' 'hv07_ch_r_u_ss_sebaceous'
 'hv07_n_r_u_sw_moist' 'hv07_tw_l_u_ss_moist' 'hv07_ax_l_u_ss_moist'
 'hv07_pc_l_u_ss_moist' 'hv10_ph_r_u_ss_moist' 'hv07_ph_l_u_ss_moist'
 'hv07_hp_l_u_ss_dry' 'hv07_ac_l_u_ss_moist' 'hv07_vf_l_u_ss_dry'
 'hv07_ra_l_u_ss_sebaceous' 'hv07_ea_l_u_sw_sebaceous'
 'hv07_al_l_u_ss_sebaceous' 'hv07_ch_l_u_ss_sebaceous'
 'hv07_n_l_u_sw_moist' 'hv07_ic_l_u_ss_moist' 'hv10_oc_c_u_ss_sebaceous'
 'hv12_ac_r_u_ss_moist' 'hv10_pc_r_u_ss_moist' 'hv14_pc_r_u_ss_moist'
 'hv14_oc_c_u_ss_sebaceous' 'hv14_mb_c_u_ss_sebaceous'
 'hv14_id_r_u_ss_moist' 'hv14_ic_r_u_ss_moist' 'hv14_hp_r_u_ss_dry'
 'hv14_gb_c_u_ss_sebaceous' 'hv14_ea_r_u_sw_sebaceous'
 'hv14_ph_r_u_ss_moist' 'hv14_ch_r_u_ss_sebaceous'
 'hv14_al_r_u_ss_sebaceous' 'hv14_ac_r_u_ss_moist' 'hv13_vf_r_u_ss_dry'
 'hv13_tw_r_u_ss_moist' 'hv13_tn_r_u_cut_toenail'
 'hv13_ra_r_u_ss_sebaceous' 'hv13_ph_r_u_ss_moist' 'hv13_pc_r_u_ss_moist'
 'hv14_ba_c_u_ss_sebaceous' 'hv13_oc_c_u_ss_sebaceous'
 'hv14_ra_r_u_ss_sebaceous' 'hv14_tw_r_u_ss_moist' 'hv15_vf_r_u_ss_dry'
 'hv15_tw_r_u_ss_moist' 'hv15_tn_r_u_cut_toenail'
 'hv15_ra_r_u_ss_sebaceous' 'hv15_ph_r_u_ss_moist' 'hv15_pc_r_u_ss_moist'
 'hv15_oc_c_u_ss_sebaceous' 'hv15_mb_c_u_ss_sebaceous'
 'hv14_tn_r_u_cut_toenail' 'hv15_id_r_u_ss_moist' 'hv15_hp_r_u_ss_dry'
 'hv15_gb_c_u_ss_sebaceous' 'hv15_ea_r_u_sw_sebaceous'
 'hv15_ch_r_u_ss_sebaceous' 'hv15_ba_c_u_ss_sebaceous'
 'hv15_al_r_u_ss_sebaceous' 'hv15_ac_r_u_ss_moist' 'hv14_vf_r_u_ss_dry'
 'hv15_ic_r_u_ss_moist' 'hv13_mb_c_u_ss_sebaceous' 'hv13_id_r_u_ss_moist'
 'hv13_ic_r_u_ss_moist' 'hv06_n_r_u_sw_moist' 'hv11_tn_r_u_cut_toenail'
 'hv11_pc_r_u_ss_moist' 'hv11_ba_c_u_ss_sebaceous'
 'hv11_oc_c_u_ss_sebaceous' 'hv11_ph_r_u_ss_moist' 'hv11_ic_r_u_ss_moist'
 'hv11_mb_c_u_ss_sebaceous' 'hv12_al_r_u_ss_sebaceous'
 'hv11_ra_r_u_ss_sebaceous' 'hv11_vf_r_u_ss_dry' 'hv11_hp_r_u_ss_dry'
 'hv11_id_r_u_ss_moist' 'hv11_ea_r_u_sw_sebaceous'
 'hv11_al_r_u_ss_sebaceous' 'hv11_ch_r_u_ss_sebaceous'
 'hv11_gb_c_u_ss_sebaceous' 'hv10_tn_r_u_cut_toenail'
 'hv11_tw_r_u_ss_moist' 'hv12_ba_c_u_ss_sebaceous'
 'hv12_ch_r_u_ss_sebaceous' 'hv12_ea_r_u_sw_sebaceous'
 'hv13_hp_r_u_ss_dry' 'hv13_gb_c_u_ss_sebaceous'
 'hv13_ea_r_u_sw_sebaceous' 'hv13_ch_r_u_ss_sebaceous'
 'hv13_ba_c_u_ss_sebaceous' 'hv13_al_r_u_ss_sebaceous'
 'hv13_ac_r_u_ss_moist' 'hv12_vf_r_u_ss_dry' 'hv12_tw_r_u_ss_moist'
 'hv12_tn_r_u_cut_toenail' 'hv12_ra_r_u_ss_sebaceous'
 'hv12_ph_r_u_ss_moist' 'hv12_pc_r_u_ss_moist' 'hv12_oc_c_u_ss_sebaceous'
 'hv12_mb_c_u_ss_sebaceous' 'hv12_id_r_u_ss_moist' 'hv12_ic_r_u_ss_moist'
 'hv12_hp_r_u_ss_dry' 'hv12_gb_c_u_ss_sebaceous'
 'hv10_ba_c_u_ss_sebaceous' 'hv06_gb_null_u_ss_sebaceous'
 'hv08_ac_l_u_ss_moist' 'sh02_ic_l_a_ss_moist' 'hv03_ra_r_u_ss_sebaceous'
 'hv03_ic_r_u_ss_moist' 'hv03_tw_r_u_ss_moist' 'hv03_al_r_u_ss_sebaceous'
 'hv03_vf_r_u_ss_dry' 'hv03_ac_r_u_ss_moist' 'hv03_hp_r_u_ss_dry'
 'hv03_id_r_u_ss_moist' 'hv03_mb_null_u_ss_sebaceous'
 'hv03_ph_r_u_ss_moist' 'hv03_tn_r_u_qq_toenail'
 'hv03_oc_null_u_ss_sebaceous' 'hv03_ba_null_u_ss_sebaceous'
 'hv03_pc_r_u_ss_moist' 'hv02_n_r_u_sw_moist' 'hv02_al_r_u_ss_sebaceous'
 'hv02_ra_r_u_ss_sebaceous' 'hv02_mb_null_u_ss_sebaceous'
 'hv02_ic_r_u_ss_moist' 'hv02_ph_r_u_ss_moist' 'hv02_tw_r_u_ss_moist'
 'hv02_tn_r_u_qq_toenail' 'hv02_ba_null_u_ss_sebaceous'
 'hv02_gb_null_u_ss_sebaceous' 'hv02_ch_r_u_ss_sebaceous'
 'hv03_ea_r_u_sw_sebaceous' 'hv03_ch_r_u_ss_sebaceous'
 'hv03_n_r_u_sw_moist' 'hv03_gb_null_u_ss_sebaceous' 'hv02_vf_l_u_ss_dry'
 'hv04_ac_l_u_ss_moist' 'hv04_ph_l_u_ss_moist'
 'lowstaggered_mock_mock_u_na_na' 'hv04_ac_l:wga_u_ss_moist'
 'hv04_ph_l:wga_u_ss_moist' 'hv04_n_l:wga_u_sw_moist'
 'lowstaggered_mock_mock:wga_u_na_na' 'hv01_gb_null_u_ss_sebaceous'
 'hv01_n_r_u_sw_moist' 'hv01_ch_r_u_ss_sebaceous'
 'hv01_al_r_u_ss_sebaceous' 'hv02_ea_r_u_sw_sebaceous'
 'hv01_ea_r_u_sw_sebaceous' 'hv01_mb_null_u_ss_sebaceous'
 'hv01_ph_r_u_ss_moist' 'hv01_tn_r_u_qq_toenail' 'hv01_vf_r_u_ss_dry'
 'hv01_ac_r_u_ss_moist' 'hv01_hp_r_u_ss_dry' 'hv01_id_r_u_ss_moist'
 'hv01_ic_r_u_ss_moist' 'hv01_tw_r_u_ss_moist'
 'hv01_oc_null_u_ss_sebaceous' 'hv01_ba_null_u_ss_sebaceous'
 'hv01_pc_r_u_ss_moist' 'hv01_ra_r_u_ss_sebaceous' 'hv02_ac_r_u_ss_moist'
 'sh02_n_null_u_sw_moist' 'hv02_id_r_u_ss_moist' 'hv05_ph_r_u_ss_moist'
 'hv05_tn_r_u_qq_toenail' 'hv05_pc_r_u_ss_moist' 'sh01_ac_r_a_ss_moist'
 'sh01_ac_l_a_ss_moist' 'sh01_vf_r_u_ss_dry' 'sh01_vf_l_u_ss_dry'
 'sh01_ra_r_a_ss_sebaceous' 'sh01_ra_l_a_ss_sebaceous'
 'sh01_n_null_u_sw_moist' 'sh01_pc_r_a_ss_moist' 'sh01_pc_l_a_ss_moist'
 'sh01_ic_r_a_ss_moist' 'sh01_ic_l_a_ss_moist' 'sh02_ac_r_u_ss_moist'
 'sh02_ac_l_a_ss_moist' 'sh02_vf_r_u_ss_dry' 'sh02_vf_l_u_ss_dry'
 'sh02_ra_r_a_ss_sebaceous' 'sh02_ra_l_a_ss_sebaceous'
 'sh02_pc_r_a_ss_moist' 'sh02_pc_l_a_ss_moist'
 'sh02_oc_null_a_ss_sebaceous' 'sh02_ic_r_a_ss_moist' 'hv02_hp_r_u_ss_dry'
 'hv05_ic_r_u_ss_moist' 'hv05_mb_null_u_ss_sebaceous'
 'sh01_oc_null_a_ss_sebaceous' 'hv05_ac_r_u_ss_moist'
 'hv02_pc_r_u_ss_moist' 'hv02_oc_null_u_ss_sebaceous'
 'hv05_id_r_u_ss_moist' 'hv04_gb_null_u_ss_sebaceous'
 'hv04_n_r_u_sw_moist' 'hv04_ch_r_u_ss_sebaceous'
 'hv04_al_r_u_ss_sebaceous' 'hv04_ea_r_u_sw_sebaceous'
 'hv04_mb_null_u_ss_sebaceous' 'hv04_ic_r_u_ss_moist'
 'hv04_ph_r_u_ss_moist' 'hv04_tw_r_u_ss_moist' 'hv04_tn_r_u_qq_toenail'
 'hv04_ra_r_u_ss_sebaceous' 'hv04_oc_null_u_ss_sebaceous'
 'hv05_ba_null_u_ss_sebaceous' 'hv05_oc_null_u_ss_sebaceous'
 'hv05_tw_r_u_ss_moist' 'hv05_hp_r_u_ss_dry' 'hv05_ea_r_u_sw_sebaceous'
 'hv05_al_r_u_ss_sebaceous' 'hv05_ra_r_u_ss_sebaceous'
 'hv05_n_r_u_sw_moist' 'hv05_gb_null_u_ss_sebaceous'
 'hv04_pc_r_u_ss_moist' 'hv04_ba_null_u_ss_sebaceous'
 'hv05_ch_r_u_ss_sebaceous']
['nd' '30s' 'na' '20s' '10s']
['nd' 'ch_r' 'al_r' 'hp_r' 'id_r' 'gb_c' 'ac_r' 'ea_r' 'fmcv13' 'ph_r'
 'mb_null' 'gb_null' 'oc_null' 'tw_r' 'ba_null' 'ax_r' 'pc_r' 'vf_r'
 'bmcv13' 'ic_r' 'mb_c' 'ra_r' 'tn_r' 'ba_c' 'oc_c' 'vf_l' 'n_l' 'tw_l'
 'al_l' 'hp_l' 'n_r' 'ch_l' 'pc_l' 'ra_l' 'ax_l' 'ph_l' 'ac_l' 'ea_l'
 'ic_l' 'mock' 'ac_l:wga' 'ph_l:wga' 'n_l:wga' 'mock:wga' 'n_null']
['nd' 'u' 'a']
['nd' 'ss' 'sw' 'mock' 'cut' 'qq']
['nd' 'sebaceous' 'dry' 'moist' 'mock' 'toenail']
['nd' '51762162' '53035658' '1279096494' '965080490' '111525130'
 '369855914' '169749190' '91861882' '125103256' '87275780' '121509614'
 '98029018' '93922998' '89222670' '96362786' '93215832' '47710988'
 '91099494' '57696340' '48629272' '135424308' '92249954' '48205330'
 '59400000' '33287052' '36527992' '358464548' '127477880' '392988842'
 '124399922' '47872394' '49826568' '87986836' '42031740' '347838118'
 '43872190' '44322330' '44423544' '57709244' '49867102' '89410374'
 '26936070' '102370620' '19623068' '20231058' '19408204' '19297898'
 '18867842' '31681434' '28435948' '57224444' '21668874' '28706880'
 '311830464' '153017112' '125837660' '197759328' '106862090' '105669948'
 '83404598' '95081584' '32423862' '90493196' '22014990' '23212526'
 '109543136' '32724912' '84871092' '90877494' '88628212' '70914644'
 '246324498' '110208268' '78898268' '92440216' '74417754' '107633006'
 '85291416' '62998668' '225311468' '77738596' '93722024' '124230474'
 '73312500' '39620338' '108093778' '410968444' '317674412' '47020794'
 '60708640' '162939272' '31484336' '143200870' '115710464' '80369202'
 '41074338' '85490394' '63230942' '475653590' '35644708' '45000650'
 '41392666' '34089412' '40696752' '122568758' '182532008' '37118580'
 '44710370' '62546500' '32220854' '39855758' '46097548' '44519052'
 '43381114' '383839724' '48894030' '100570322' '41175968' '113715326'
 '119315916' '40215846' '48393216' '39905278' '69876962' '33565124'
 '398284360' '48984130' '93789520' '52612186' '121276038' '34536186'
 '135078938' '32908654' '374148092' '54979922' '39363950' '43802218'
 '35630494' '45398148' '54983368' '35021652' '45180046' '122454920'
 '102874082' '38051004' '33499386' '39774542' '44457696' '42171678'
 '36135184' '47155120' '41214768' '35098684' '475099994' '49082480'
 '33652886' '34298720' '46620522' '50448834' '124511552' '50673680'
 '47329948' '142951150' '66557292' '36586106' '121548568' '42599010'
 '56729264' '102926220' '35047008' '411640326' '47820862' '32368024'
 '128449726' '19769226' '156763966' '59624498' '23043776' '21935024'
 '51373192' '31575588' '34353336' '38585924' '30819706' '56742314'
 '39987626' '25835238' '22219450' '167038760' '14915582' '25294356'
 '35568712' '24406828' '22508384' '21492256' '13715094' '23749634'
 '17489148' '36925240' '24639454' '37557182' '59689944' '51848384'
 '88153576' '58519898' '379164' '19117464' '44324108' '57317006'
 '78928114' '83573332' '79470486' '84218532' '37809640' '44725978'
 '40168234' '40494172' '53368828' '57169932' '44270672' '49298870'
 '39294508' '34539920' '31055058' '15862342' '32484470' '22741266'
 '21986570' '31514460' '26454202' '35153578' '44381986' '33365652'
 '23943022' '25948226' '23508032' '28177736' '32051986' '66774622'
 '163479952' '94186676' '52861482' '33030322' '56827032' '46307206'
 '51428672' '48713976' '78325828' '35845120' '23694576' '13844418'
 '15123010' '19202150' '26233180' '31566194' '18834202' '88764608'
 '61302946' '122277240' '33847884' '60581754' '25585694' '50012152'
 '39032652' '23962266' '41772196' '51594592' '29936952' '60140602'
 '51405392' '83563020' '42050864' '29992438' '25397028' '15533570'
 '15495932' '33719366' '177878284' '42032594' '26331068' '38854772'
 '23658748' '32189860' '48340248' '18163190' '49792140' '30115136'
 '26707488' '39374662' '32012588' '38018868']
['nd' '197' '192' '126' '109' '157' '131' '198' '177' '187' '153' '165'
 '116.5' '103' '110.5' '158' '174' '193' '136' '166' '207' '147' '156'
 '152' '146' '128' '221' '114' '119' '111' '191' '188' '162' '185' '99'
 '132' '217' '286' '130' '212' '225' '151' '190' '206' '92' '115' '124'
 '120' '134' '122' '142' '94' '105' '96' '200' '219' '230' '154' '125'
 '97' '98' '102' '183' '104' '173' '186' '129' '161' '135' '164' '169'
 '137' '148' '139' '194' '160' '145' '141' '140' '144' '172' '165.5' '211'
 '170' '171' '168' '121' '123' '149' '181' '167' '175' '117' '138' '150'
 '135.5' '127' '118' '116' '133' '138.5' '89' '90' '195' '163' '176' '268'
 '249' '113' '202' '112']
['nd' '3483930' '3555520' '120138282' '92444068' '9194456' '26930214'
 '16354624' '5327160' '9855870' '5517964' '7844208' '6613642' '7268452'
 '5278580' '8599934' '8808510' '2726352' '8244206' '3909374' '2152702'
 '14716018' '6080208' '3247000' '3409258' '2396120' '2087292' '21317516'
 '7138068' '26473684' '9664430' '2869302' '2991192' '5377864' '2825224'
 '24059736' '3212712' '2407112' '2405810' '3487726' '2592264' '5578322'
 '1195206' '7093562' '708598' '814150' '826270' '852476' '784476'
 '1517976' '1339392' '4574582' '808984' '1506302' '64860204' '30221722'
 '22380018' '41459478' '19448940' '17689272' '13912244' '15896408'
 '1878848' '7908294' '1031500' '922424' '6898782' '924362' '4972452'
 '5559642' '5192280' '6015918' '20635256' '6433518' '5295702' '6484616'
 '5821138' '6803066' '5002758' '2620968' '18872454' '5226906' '5135912'
 '6185224' '5650606' '2918138' '7114170' '25687178' '26057348' '2593332'
 '4111356' '9630952' '2176698' '8769154' '9164758' '5568264' '2405316'
 '6296044' '3811024' '39051534' '1946230' '3098394' '2593488' '1807132'
 '1882238' '8975328' '21933926' '2204056' '2277176' '4041482' '2083768'
 '3070704' '2702930' '2522098' '2924118' '33589228' '3343724' '6637398'
 '2417770' '8168928' '7317392' '2675534' '2742086' '2635430' '4763386'
 '1762178' '31276298' '2503598' '5544806' '3456502' '7170948' '2313050'
 '20740052' '1895372' '21751046' '3361354' '2538126' '2643646' '2291042'
 '2801420' '3132882' '1912932' '2777176' '6895084' '6462608' '2128784'
 '1956286' '2147116' '1812710' '2081524' '2152736' '2087228' '2203108'
 '1884608' '33020934' '2188346' '1777228' '2066364' '2320212' '2290860'
 '6908226' '2725640' '2599700' '16891332' '3321412' '2228234' '7044840'
 '2395242' '3046886' '5535336' '1975902' '24874814' '2134298' '1888628'
 '20190842' '933012' '27523422' '11606612' '4065768' '4253022' '8488988'
 '6650874' '6923710' '8483504' '6790842' '10578068' '8769150' '4467778'
 '3991866' '34357276' '2476122' '3446230' '4153844' '3788690' '4075074'
 '3409584' '2520300' '3380040' '3001456' '8330582' '5532352' '8478660'
 '9797296' '8691848' '14748638' '9699056' '24704' '2684916' '5414526'
 '6968018' '8855910' '9241404' '8151494' '9788516' '8230256' '8030952'
 '8055134' '8267210' '9488158' '11193598' '8661086' '9240210' '7609250'
 '6882772' '5040798' '2471178' '5348466' '4132610' '3496632' '5438164'
 '5151884' '5783498' '9083606' '7952574' '2714806' '6562522' '4659992'
 '6622604' '6011844' '3365080' '31721832' '5764774' '2871756' '1695388'
 '3033652' '2500880' '2881726' '3187850' '4721296' '4577592' '2840210'
 '1648350' '1701778' '2129918' '3084004' '3780600' '2267876' '15429640'
 '8961326' '21064700' '7975002' '3634672' '6732774' '2673578' '8460764'
 '5714310' '10066456' '10749776' '3489360' '6499852' '10223976' '10066502'
 '9876752' '6517128' '5473898' '4304484' '3744066' '7997668' '23263098'
 '6256788' '5584654' '7730420' '5622310' '6483054' '10482192' '5187246'
 '10006254' '6814602' '7098814' '8685642' '7844290' '7122292']
['nd' '25948324' '33113648' '250039552' '109393528' '53539478' '25486282'
 '103425326' '64970324' '1867184' '44633468' '79044286' '48976608'
 '283728' '53992288' '838580' '10839002' '5456656' '17512' '3202016'
 '30039170' '57103068' '48288854' '16417494' '35838254' '9688330'
 '15581676' '203877996' '43754990' '113300064' '82818030' '13595268'
 '27263056' '32701688' '10720178' '65856438' '4923288' '21173458'
 '2664424' '16217990' '22009632' '53843664' '1625970' '43420802' '9805990'
 '15475744' '421312' '10938974' '5490906' '19982570' '523052' '33285768'
 '13974622' '1998042' '137459952' '75447876' '10300832' '93809422'
 '39917774' '57326872' '41283884' '42760288' '3731832' '18943914'
 '2386170' '11530870' '82869780' '19898122' '61950752' '67935068'
 '69736076' '92752' '556026' '720788' '41944514' '1063338' '5519414'
 '4676122' '2660430' '18083022' '21569590' '8319702' '46758428' '46895482'
 '2578662' '6805142' '18939834' '156454292' '45399646' '10727114'
 '20553386' '95370644' '5535666' '25395918' '70742512' '53904784'
 '9568944' '45568634' '25701872' '141708118' '6057312' '3331298'
 '24083750' '21222878' '9387996' '19210022' '58440496' '18495792'
 '15494792' '5820540' '1958676' '2931984' '3930452' '27721460' '830166'
 '28117838' '765974' '34030640' '24790226' '12411612' '10311830'
 '15223872' '13319592' '27140324' '17330220' '20043278' '74791102'
 '13109462' '58977560' '25784834' '28672278' '6869584' '85381172'
 '13944030' '113953026' '11747038' '8926540' '4196480' '14148260'
 '14475146' '30275304' '21920008' '8129240' '48836124' '15080416'
 '18419750' '16450426' '21399450' '29222822' '15252162' '162762' '9849898'
 '24726752' '14471756' '155701938' '29956020' '21067636' '19361612'
 '14569112' '30880450' '41173124' '10338432' '787210' '75396990'
 '40427630' '1820014' '41384098' '24925748' '11460218' '30767594'
 '18881274' '134032816' '28152580' '10861194' '72351876' '3812148'
 '22485172' '33118944' '13592868' '13085972' '28402738' '13765640'
 '18873054' '8000532' '9551708' '25986324' '2181132' '8421844' '5762096'
 '41710412' '7285966' '18278068' '17217684' '14324780' '3490650'
 '12391698' '359788' '467832' '7691484' '14910890' '10872366' '17536268'
 '34263400' '19644522' '59711752' '34807878' '35526' '2774410' '2604854'
 '61916' '41686328' '11610382' '53698784' '178716' '5803426' '29621520'
 '18768442' '19061944' '16504598' '27202824' '24373148' '1727082'
 '21762140' '16402256' '15393984' '6246822' '15658170' '1493696' '428060'
 '3182340' '3495958' '17470508' '16690824' '13134850' '15592982'
 '10132432' '10377088' '11938496' '18241430' '41159166' '77829864'
 '41631964' '27880266' '19921708' '37622918' '34884950' '28170698'
 '22757810' '51315230' '25159820' '10966934' '5952440' '6092712' '7831348'
 '18798536' '21373650' '8309638' '39362844' '35806816' '38787790'
 '14806078' '26150304' '3450040' '30683692' '15720774' '11961550'
 '2101342' '14029226' '16472002' '35357064' '28807508' '35306354'
 '21718202' '17662948' '13221818' '3508838' '922574' '12651554' '86033362'
 '17784980' '6117708' '18226446' '7412330' '9834348' '21522484' '6278376'
 '24260726' '19866574' '5712744' '21913214' '16857294' '12288188']
['nd' '8291492' '8861485' '175703195' '207781313' '26542888' '44262324'
 '34705600' '17394593' '616455' '14106142' '24928607' '21915122' '262160'
 '19491879' '1181088' '22672255' '5792824' '147176' '2227489' '11125935'
 '15286114' '29538649' '7589033' '9068951' '5842478' '5828881' '91995653'
 '19322802' '100322281' '15294364' '24074973' '10235220' '17158422'
 '15325879' '106143591' '2532127' '6380280' '1086153' '7096555' '12577626'
 '12228660' '6244489' '19740249' '4024596' '3311126' '638929' '6122607'
 '5681852' '9576451' '349249' '14482356' '5799138' '11184667' '98987553'
 '45491250' '8996135' '53896141' '23001121' '22269367' '21137721'
 '12432988' '16869909' '32213966' '9225415' '10190348' '17055963'
 '8351715' '14334951' '12353946' '13379520' '127002' '4904397' '5430143'
 '17646549' '970566' '23402568' '18490620' '20632735' '24981980'
 '95251944' '37644128' '25831243' '61957882' '12289231' '3075767'
 '40514479' '179885132' '101652112' '6537550' '6027916' '39319723'
 '8986523' '11927335' '24721951' '14543535' '5221413' '14650603' '9744816'
 '86775119' '2632032' '6467511' '9796845' '6981046' '3497751' '43483719'
 '20971081' '6715182' '8762915' '4077786' '3095427' '4873593' '10838918'
 '8329322' '909659' '94938913' '1663689' '8730531' '12569749' '25600628'
 '4143207' '4061931' '5858156' '7231732' '6415149' '5175364' '105841909'
 '6651039' '14744652' '7065998' '18416123' '8178409' '28228845' '15476827'
 '100749766' '6270575' '3319967' '1805752' '12812621' '3622573' '9572355'
 '5118727' '3701118' '21330002' '9972654' '6300714' '5992452' '8415053'
 '8990708' '19745219' '220799' '3515798' '8318483' '6417045' '111755930'
 '9934580' '6451051' '5261597' '5368405' '10860926' '22852429' '10899072'
 '1757986' '20862371' '12769463' '2652581' '41682825' '12154958' '5694700'
 '46050905' '9576084' '58169296' '8574412' '6784121' '19110268' '8222384'
 '12705799' '10596603' '4925145' '4325766' '7736019' '7342684' '6861235'
 '4038121' '4984994' '6973516' '2339875' '7216626' '4113909' '35183621'
 '4499732' '3295261' '11583328' '5743563' '1431844' '5261576' '276766'
 '359255' '3302179' '4753107' '4894790' '8385470' '9216545' '7157851'
 '12674161' '10401397' '280919' '10010949' '9350256' '84062' '17892016'
 '4458631' '17064445' '170435' '1921701' '6682981' '5681330' '5626384'
 '11547186' '8510389' '8463497' '650762' '5281844' '6422503' '5663224'
 '2673296' '6475044' '663869' '241948' '1388888' '1911509' '6195457'
 '4034007' '5612996' '5393721' '4582164' '3356917' '3389485' '3702510'
 '19926321' '44208926' '39220066' '18294744' '9564531' '14005752'
 '8470440' '19648808' '20691327' '8386651' '4292792' '9209937' '4128771'
 '6145260' '7999099' '4091849' '6180952' '7491372' '30946397' '15287817'
 '19678059' '5911299' '20677088' '915869' '15946404' '7756894' '4345223'
 '2555924' '5858057' '7995542' '17561137' '11014582' '27994457' '8183293'
 '5150714' '3246757' '998192' '276425' '6703204' '63972108' '10071784'
 '3004783' '8631511' '2717489' '3041132' '11816292' '1870190' '7710272'
 '3035542' '1895536' '7672746' '6345836' '6158255']
['nd' '201628' '112400' '13646164' '15033218' '315272' '3684418' '198998'
 '46352' '1239190' '314952' '120298' '316704' '1233238' '154362' '1998464'
 '1745694' '672714' '1443820' '575602' '71484' '746308' '159320' '328532'
 '189392' '224666' '211372' '680106' '881026' '3026028' '217252' '240892'
 '144176' '559606' '257992' '5017712' '589246' '215712' '359122' '411200'
 '209270' '221822' '432172' '539832' '92540' '10042' '388884' '36716'
 '148776' '5722' '414890' '114268' '20654' '339700' '276668' '47030'
 '1584524' '224974' '590280' '156634' '82548' '466596' '237672' '928614'
 '230702' '20600' '29092' '55172' '47948' '59074' '3618' '1005642'
 '6569654' '2764188' '236780' '1543136' '1034782' '2137660' '1582100'
 '337322' '2726288' '715330' '232578' '229850' '1391686' '437290' '958410'
 '1348394' '4748198' '488958' '486116' '317822' '353152' '1395430'
 '191236' '88594' '377392' '290928' '412476' '3955992' '410682' '791804'
 '55212' '62446' '403256' '1298972' '1361588' '152866' '366454' '769994'
 '689958' '820378' '643664' '104122' '599352' '7953188' '1342944' '786022'
 '24728' '1839572' '1312952' '289978' '329790' '50310' '695496' '104554'
 '4482004' '498804' '227522' '282394' '1122384' '431462' '9500' '43798'
 '2324546' '632564' '338908' '605518' '162148' '407338' '187230' '96680'
 '490664' '768768' '1112316' '172940' '159580' '121658' '69944' '117278'
 '537978' '480066' '90374' '146000' '3131328' '106304' '61288' '114684'
 '392060' '95268' '814250' '547910' '920510' '343276' '168152' '576132'
 '534962' '50508' '643382' '421358' '67186' '2942252' '137314' '221096'
 '306552' '177038' '1510790' '110484' '9664' '7910' '181316' '128660'
 '52810' '505896' '276772' '381884' '583658' '215412' '384874' '2129037'
 '28333' '5584' '124404' '19904' '603182' '12750' '235480' '624292'
 '71404' '370108' '152554' '131318' '112546' '446074' '34082' '89702'
 '420' '90490' '463857' '1324370' '238076' '1053972' '13572' '1587222'
 '457382' '5180' '161844' '156820' '669332' '193404' '61524' '294094'
 '44340' '84758' '93462' '97852' '107318' '337306' '249820' '638788'
 '442634' '109120' '308316' '306634' '5498' '203734' '406806' '221878'
 '186072' '426190' '171862' '1383010' '734066' '407316' '427618' '76022'
 '101582' '360256' '3277028' '58756' '20102' '72786' '38624' '36970'
 '5758' '5188' '19446' '31324' '15386' '689326' '242596' '1925126'
 '936956' '114620' '151470' '79854' '1480230' '350310' '73722' '17550'
 '78277' '621794' '96988' '29234' '117758' '293494' '378356' '267004'
 '134730' '365150' '339500' '88584' '238002' '336154' '303446' '282242'
 '531972' '22090' '640924' '53346' '43452' '641792']
['nd' '464690' '293994' '58102197' '119896263' '688817' '18986877'
 '619790' '154782' '3145586' '756352' '357107' '846613' '3901728' '428989'
 '8847768' '12153680' '2812927' '4295230' '1467620' '234462' '1569925'
 '907082' '768839' '367084' '706162' '451820' '2433471' '2306460'
 '14514555' '540800' '1279662' '321973' '1397674' '1134528' '31806895'
 '1205525' '422294' '871336' '1168227' '461979' '476061' '6291292'
 '1508761' '470713' '81184' '2962954' '216686' '995250' '61662' '1935134'
 '451458' '153811' '5803632' '2087659' '574895' '5388154' '1422863'
 '2552170' '917208' '482978' '2167994' '3337731' '6292033' '3333246'
 '174367' '122419' '152518' '113639' '138428' '55005' '3236136' '54524307'
 '31326641' '766216' '5017613' '10176400' '13892780' '18382628' '1265393'
 '20776727' '5154051' '577757' '1409250' '15543235' '978349' '8967838'
 '10823412' '31191051' '1394185' '713001' '1002367' '1978313' '3467186'
 '411236' '194024' '1091072' '554615' '685414' '13852611' '932779'
 '4541969' '180620' '142316' '837224' '11282319' '2516461' '286402'
 '1012513' '2196982' '3448825' '4179795' '4244523' '175264' '1302338'
 '71242718' '8096527' '1537550' '115158' '14929677' '3065908' '600835'
 '808278' '118137' '1219003' '169774' '32408712' '1330972' '489036'
 '593378' '3825284' '2054151' '190803' '292674' '12641911' '1460840'
 '952595' '2034555' '716704' '684111' '390442' '242962' '1510461'
 '3552994' '3210782' '498042' '453969' '400862' '200050' '632247'
 '2108473' '798787' '182108' '315945' '13317195' '218584' '135188'
 '242452' '732851' '224902' '2734046' '2754595' '5595320' '845914'
 '347432' '3639000' '2613545' '172364' '1156777' '4505926' '217613'
 '8730214' '250796' '460060' '1526789' '1702970' '8808597' '856118'
 '112831' '99431' '1654222' '678270' '354757' '2763516' '1635499'
 '2806006' '3042841' '1067327' '1505145' '10419052' '160925' '166123'
 '703501' '151609' '2657740' '123364' '1284109' '2584398' '449053'
 '2353136' '877353' '922004' '819051' '2674695' '412300' '595520' '1957'
 '1553400' '8150686' '7782044' '1820046' '7689012' '180645' '10104484'
 '2850971' '104442' '1120219' '983925' '3472331' '1237810' '401261'
 '1941198' '432203' '473685' '601919' '512549' '623879' '1992791'
 '1403554' '3344404' '2092740' '598891' '2133320' '1487246' '39232'
 '1040719' '1366922' '1194956' '998796' '161484' '897421' '811672'
 '296821' '95595' '145586' '53647' '134669' '257027' '781171' '221986'
 '126112' '239071' '164943' '181741' '45689' '49449' '119717' '366246'
 '143269' '4311537' '1233646' '1336863' '4487326' '90199' '880221'
 '477334' '6972746' '2162092' '249496' '129342' '555779' '3404439'
 '687441' '213976' '543980' '1159554' '2062234' '1090142' '1069834'
 '1862024' '2110857' '573699' '1704096' '2766709' '1354734' '1219032'
 '2227284' '209568' '2881132' '309859' '255946' '3011437']
['nd' '12992820' '6844332' '648477994' '412945354' '20718876' '236283950'
 '14019612' '3823364' '106427176' '21520296' '8924324' '19011076'
 '79974196' '9635390' '74035560' '36422336' '29122068' '75118544'
 '45336432' '4864614' '44616864' '7050786' '19309732' '10254320'
 '13911126' '12159032' '36958944' '53292816' '133349714' '15381006'
 '5574228' '8622776' '30024172' '11602374' '112401742' '30692990'
 '13332622' '36442892' '28892116' '11667606' '16765858' '10770208'
 '29648588' '4207126' '466616' '13857204' '1024600' '5538790' '289186'
 '23241710' '3926512' '828942' '7692518' '7123502' '897958' '74680698'
 '6253752' '20050218' '6817920' '6234530' '20149888' '6130650' '23790640'
 '5630418' '295542' '2398888' '3253906' '3310462' '4671080' '161706'
 '59670236' '157551230' '63002998' '12452506' '76419344' '28108606'
 '61034260' '36652498' '15421056' '65079330' '20349876' '14896208'
 '7185278' '35494306' '24772874' '31127096' '35300908' '106409630'
 '24882878' '28312152' '16930442' '12283194' '91058378' '10205740'
 '5898486' '22126676' '17743060' '22496408' '187193712' '23344620'
 '26409662' '4530514' '3779006' '24225376' '37657148' '75553290' '9084964'
 '16551704' '45014056' '20534024' '23550532' '23455844' '5551398'
 '35949222' '145493586' '33240574' '47773904' '1180002' '50061544'
 '91558506' '16956558' '25114870' '2625674' '38680972' '6187800'
 '146743924' '24465582' '13441778' '15015802' '61274358' '14438312'
 '363848' '1145138' '120819916' '30885118' '22708012' '31660276' '5355806'
 '22946518' '11139732' '5553290' '28147486' '40260970' '65919166'
 '10248604' '8215572' '7077686' '3997006' '4143648' '30649728' '29938124'
 '5565230' '11692072' '155903880' '6509984' '4061572' '7057116' '22788270'
 '5943918' '49353190' '23115856' '35369196' '27949826' '9327868'
 '25456712' '27805878' '2781446' '34299960' '15328764' '4250596'
 '180503258' '8386936' '11894436' '14032306' '4738820' '79210120'
 '2801468' '274580' '125514' '3796228' '2627912' '1090018' '12979002'
 '6734616' '8158728' '21224458' '3972242' '5845364' '39190138' '400420'
 '70802' '1511840' '311510' '8977070' '241726' '8408278' '15094270'
 '2742450' '4801600' '1841530' '1607900' '5057850' '11829278' '440522'
 '2621940' '33314' '1874968' '17963192' '39087426' '7545322' '46686526'
 '254532' '58990644' '17024400' '216468' '5777466' '5853576' '9454038'
 '8127674' '2080890' '34228996' '3887978' '3994164' '3931008' '3571824'
 '3953090' '13111282' '15315166' '15677166' '12351902' '4671234'
 '10968468' '3978020' '157528' '2880476' '2683408' '4054638' '2340606'
 '1600996' '8121750' '5077660' '2637188' '1270504' '1466584' '257068'
 '374510' '1315280' '9399758' '1392306' '458662' '1698620' '912664'
 '945332' '168198' '131040' '566840' '2398620' '971460' '35574054'
 '3004650' '6574430' '6487492' '409246' '5625456' '1136818' '14720930'
 '17252660' '1538950' '457178' '515916' '5002914' '1134434' '324560'
 '2447906' '4498310' '6802736' '4407874' '2885382' '4878128' '7779304'
 '3217532' '4963898' '7740584' '2257320' '2591546' '3833730' '112630'
 '6723860' '597364' '535636' '7413742']
['nd' '379278' '254279' '12989110' '7586746' '525343' '14221849' '425240'
 '145307' '1951795' '426606' '290784' '349253' '999496' '241182' '861392'
 '574355' '1127447' '1833006' '977807' '140905' '1386011' '225055'
 '544700' '272741' '518170' '207919' '1200862' '781718' '2002516' '484040'
 '238069' '248175' '767410' '165565' '2552004' '716302' '390852' '593807'
 '435430' '348725' '295987' '376733' '418826' '313505' '72196' '312651'
 '105839' '227792' '247867' '632521' '389500' '82723' '182019' '1034926'
 '336381' '2507299' '692698' '1301587' '492675' '270693' '1207422'
 '237220' '415735' '177539' '78375' '168212' '89117' '140888' '160256'
 '100007' '766958' '1583628' '529992' '556001' '941603' '354846' '598498'
 '378267' '288927' '1035135' '328603' '289898' '367508' '364774' '632778'
 '471951' '1469128' '2216427' '396777' '504713' '367322' '170790'
 '1187469' '273031' '171515' '283525' '386510' '378932' '3116504' '321053'
 '360012' '152237' '94588' '462911' '661250' '1755166' '179318' '244816'
 '625660' '410176' '428772' '281217' '115388' '866259' '2504253' '440598'
 '1074277' '78335' '703365' '1606121' '407138' '220444' '103671' '772736'
 '122176' '2740411' '424673' '364166' '413278' '794663' '251218' '164718'
 '110815' '1907881' '622433' '579802' '855991' '143913' '461042' '285423'
 '177053' '423901' '810978' '1116140' '282170' '271101' '212717' '164456'
 '199600' '302708' '485219' '128713' '171258' '2268789' '168662' '98923'
 '194895' '449612' '152510' '676287' '292175' '300026' '661441' '195335'
 '213433' '482420' '118744' '427341' '316337' '78353' '2387676' '184526'
 '258489' '931093' '182854' '4520066' '534269' '62920' '37409' '1113681'
 '381548' '197752' '1815353' '845275' '1857788' '1846512' '474009'
 '616196' '4049224' '64084' '32288' '274111' '66772' '1272824' '51558'
 '630373' '1239547' '231122' '1405817' '468509' '495562' '423256'
 '1404116' '132121' '304405' '2324' '128331' '376737' '2009170' '890416'
 '2833405' '107014' '3398515' '1521504' '64435' '603799' '544313'
 '2233185' '704233' '229266' '1216528' '276753' '279782' '330663' '288821'
 '318503' '1009712' '851390' '1844710' '1007575' '324870' '1163445'
 '893332' '39255' '546179' '656899' '755679' '570728' '135385' '528297'
 '297530' '146641' '75280' '124922' '64199' '116679' '144426' '444694'
 '141868' '72619' '104380' '67029' '77742' '39146' '45315' '59313'
 '229537' '116872' '2171774' '674613' '283271' '2575237' '94413' '437073'
 '247177' '3874568' '1192471' '117880' '118479' '209354' '1166560'
 '353754' '93878' '344911' '770698' '1309541' '601920' '519770' '813740'
 '1394262' '386580' '1000623' '1987879' '603780' '734558' '1221902'
 '54130' '1754478' '142491' '130134' '1383162']
['nd' '13372098' '7098611' '661467104' '420532100' '21244219' '250505799'
 '14444852' '3968671' '108378971' '21946902' '9215108' '19360329'
 '80973692' '9876572' '74896952' '36996691' '30249515' '76951550'
 '46314239' '5005519' '46002875' '7275841' '19854432' '10527061'
 '14429296' '12366951' '38159806' '54074534' '135352230' '15865046'
 '5812297' '8870951' '30791582' '11767939' '114953746' '31409292'
 '13723474' '37036699' '29327546' '12016331' '17061845' '11146941'
 '30067414' '4520631' '538812' '14169855' '1130439' '5766582' '537053'
 '23874231' '4316012' '911665' '7874537' '8158428' '1234339' '77187997'
 '6946450' '21351805' '7310595' '6505223' '21357310' '6367870' '24206375'
 '5807957' '373917' '2567100' '3343023' '3451350' '4831336' '261713'
 '60437194' '159134858' '63532990' '13008507' '77360947' '28463452'
 '61632758' '37030765' '15709983' '66114465' '20678479' '15186106'
 '7552786' '35859080' '25405652' '31599047' '36770036' '108626057'
 '25279655' '28816865' '17297764' '12453984' '92245847' '10478771'
 '6070001' '22410201' '18129570' '22875340' '190310216' '23665673'
 '26769674' '4682751' '3873594' '24688287' '38318398' '77308456' '9264282'
 '16796520' '45639716' '20944200' '23979304' '23737061' '5666786'
 '36815481' '147997839' '33681172' '48848181' '1258337' '50764909'
 '93164627' '17363696' '25335314' '2729345' '39453708' '6309976'
 '149484335' '24890255' '13805944' '15429080' '62069021' '14689530'
 '528566' '1255953' '122727797' '31507551' '23287814' '32516267' '5499719'
 '23407560' '11425155' '5730343' '28571387' '41071948' '67035306'
 '10530774' '8486673' '7290403' '4161462' '4343248' '30952436' '30423343'
 '5693943' '11863330' '158172669' '6678646' '4160495' '7252011' '23237882'
 '6096428' '50029477' '23408031' '35669222' '28611267' '9523203'
 '25670145' '28288298' '2900190' '34727301' '15645101' '4328949'
 '182890934' '8571462' '12152925' '14963399' '4921674' '83730186'
 '3335737' '337500' '162923' '4909909' '3009460' '1287770' '14794355'
 '7579891' '10016516' '23070970' '4446251' '6461560' '43239362' '464504'
 '103090' '1785951' '378282' '10249894' '293284' '9038651' '16333817'
 '2973572' '6207417' '2310039' '2103462' '5481106' '13233394' '572643'
 '2926345' '35638' '2003299' '18339929' '41096596' '8435738' '49519931'
 '361546' '62389159' '18545904' '280903' '6381265' '6397889' '11687223'
 '8831907' '2310156' '35445524' '4164731' '4273946' '4261671' '3860645'
 '4271593' '14120994' '16166556' '17521876' '13359477' '4996104'
 '12131913' '4871352' '196783' '3426655' '3340307' '4810317' '2911334'
 '1736381' '8650047' '5375190' '2783829' '1345784' '1591506' '321267'
 '491189' '1459706' '9844452' '1534174' '531281' '1803000' '979693'
 '1023074' '207344' '176355' '626153' '2628157' '1088332' '37745828'
 '3679263' '6857701' '9062729' '503659' '6062529' '1383995' '18595498'
 '18445131' '1656830' '575657' '725270' '6169474' '1488188' '418438'
 '2792817' '5269008' '8112277' '5009794' '3405152' '5691868' '9173566'
 '3604112' '5964521' '9728463' '2861100' '3326104' '5055632' '166760'
 '8478338' '739855' '665770' '8796904']
['nd' '0.451571136' '0.499255217' '0.866561061' '0.949981061'
 '0.431624798' '0.927825303' '0.459345874' '0.865071053' '0.330111212'
 '0.634218131' '0.608405824' '0.568022656' '0.184737626' '0.867623093'
 '0.235349343' '0.673434798' '0.905442727' '0.104877677' '0.289869343'
 '0.740868367' '0.349584697' '0.912396901' '0.180797513' '0.169000673'
 '0.368650629' '0.693043443' '0.68204399' '0.639780758' '0.834865404'
 '0.429794968' '0.659139474' '0.436616092' '0.222099192' '0.401947759'
 '0.906227677' '0.18633202' '0.359563162' '0.341683737' '0.442206111'
 '0.167189412' '0.821155444' '0.959608974' '0.729838535' '0.789727073'
 '0.9367675' '0.381362213' '0.687338889' '0.926603673' '0.3626325'
 '0.16839197' '0.604248205' '0.983445714' '0.969346957' '0.935736857'
 '0.901075' '0.276896515' '0.9479' '0.904325829' '0.39122913'
 '0.189882951' '0.127801574' '0.951795122' '0.80175202' '0.991456341'
 '0.97829' '0.945385833' '0.871643125' '0.737773636' '0.934024255'
 '0.89575' '0.232578485' '0.296138737' '0.217768333' '0.843964574'
 '0.451246566' '0.384490505' '0.293618182' '0.529615808' '0.478286282'
 '0.507768737' '0.366675808' '0.531052067' '0.445787297' '0.462897576'
 '0.231108182' '0.575382424' '0.911779343' '0.996011768' '0.452665657'
 '0.168616162' '0.833049942' '0.720959919' '0.841446414' '0.35352466'
 '0.595397797' '0.739959747' '0.491318111' '0.285085909' '0.813787879'
 '0.50620702' '0.708512222' '0.844762' '0.704231892' '0.937458889'
 '0.831829091' '0.171759545' '0.603024945' '0.226660602' '0.639463939'
 '0.71777404' '0.934146919' '0.573288636' '0.512156' '0.975689394'
 '0.868278586' '0.255925556' '0.298396364' '0.944411818' '0.725593434'
 '0.885292424' '0.203400174' '0.165618081' '0.737963462' '0.186738283'
 '0.321342419' '0.635174242' '0.643984545' '0.317334526' '0.324397843'
 '0.591850152' '0.770241034' '0.813493333' '0.947160909' '0.918440354'
 '0.279800404' '0.379002475' '0.992060455' '0.917410189' '0.174016667'
 '0.294325752' '0.358875179' '0.575641061' '0.808387828' '0.630433737'
 '0.572744615' '0.249777831' '0.581912394' '0.3550295' '0.792736667'
 '0.228211111' '0.284534697' '0.540335818' '0.350372393' '0.65525399'
 '0.502628308' '0.909376' '0.40247507' '0.13508596' '0.568555424'
 '0.596478889' '0.54204596' '0.300383485' '0.395976616' '0.337402872'
 '0.393698838' '0.520440051' '0.853673214' '0.247345859' '0.678160129'
 '0.616369524' '0.529517374' '0.339503929' '0.1954675' '0.296820548'
 '0.952757105' '0.058788535' '0.505749032' '0.9691' 'na' '0.329005435'
 '0.780058077' '0.97721' '0.608555461' '0.700757571' '0.135306598'
 '0.41019404' '0.882444' '0.359361228' '0.161459293' '0.99136'
 '0.670554286' '0.986025' '0.190544896' '0.98559' '0.702564941'
 '0.188682941' '0.902458519' '0.309881552' '0.624247619' '0.731642778'
 '0.770375' '0.239588203' '0.960673333' '0.432337037' '0.993275'
 '0.468076593' '0.342290707' '0.665524211' '0.40400803' '0.80665'
 '0.310207879' '0.170330497' '0.94273' '0.336651803' '0.294656721'
 '0.476897358' '0.430029882' '0.553276667' '0.314709394' '0.64153575'
 '0.990176154' '0.99160125' '0.947015556' '0.983710256' '0.570112279'
 '0.286859359' '0.231480769' '0.140770238' '0.798888723' '0.179002627'
 '0.985611818' '0.994122258' '0.976413103' '0.366787609' '0.982167778'
 '0.852841333' '0.3773485' '0.909968043' '0.966441667' '0.848460909'
 '0.960598571' '0.96833' '0.96738' '0.643229091' '0.7576475' '0.965544286'
 '0.685063333' '0.209234' '0.914218571' '0.91822375' '0.33441'
 '0.366482273' '0.964645' '0.120276919' '0.995626667' '0.627655082'
 '0.220916235' '0.956673333' '0.831114107' '0.997211667' '0.265234046'
 '0.863196742' '0.785567857' '0.963433333' '0.978502' '0.279552885'
 '0.781042308' '0.993135' '0.760745385' '0.9073244' '0.471628205'
 '0.695227174' '0.823123704' '0.443602157' '0.174455341' '0.767548485'
 '0.315405357' '0.787855638' '0.919712083' '0.481632667' '0.549566522'
 '0.29653575' '0.994306' '0.986466' '0.311073333']
['nd' 'norman' 'tunapuco' 'matses']
['nd' 'overweight' 'healthy' 'obese' 'na' 'underweight']
['nd' 'yes']
['nd' 'yes']
['nd' '137201' '201279' '73907' '139647' '163147' '171714' '137595'
 '234531' '148940' '125909' '120143' '84042' '207056' '123772' '144051'
 '209579' '107827' '33269' '31265' '115066' '19010' '19869' '106266'
 '32715' '28915' '29142' '219925' '152005' '85863' '169580' '133136'
 '109175' '85973' '83169' '52181' '109898' '111553' '93080' '91905'
 '111057' '90000' '105303' '93951' '134329' '99989' '144511' '282526'
 '136702' '157919' '96773' '89370' '133508' '97170' '99468' '103438'
 '95462' '99439' '108481']
['nd' '20524182' '23161751' '22261146' '24281027' '25017951' '23486818'
 '18797354' '21375588' '19877728' '24207515' '23801292' '26854797'
 '28327953' '25977359' '6025093' '3513166' '29109143' '5597578' '6653729'
 '6056934' '3400837' '4674029' '4990441' '5212204' '5411239' '3046571'
 '20625472' '21377881' '29093620' '23047857' '24510902' '27856765'
 '30018788' '22027536' '33171349' '26897725' '26523695' '28011827'
 '34345773' '29763287' '27403057' '29679776' '26916930' '6698447'
 '32150556' '22716185' '30670037' '22567813' '26588425' '35415317'
 '45077030' '24490144' '23064470' '32172764' '31120212' '29059286'
 '29246497' '22223170']
['nd' '1801257' '1800520' '1590912' '1701998' '1757924' '1605024'
 '1438450' '1542028' '1709795' '2162375' '2203115' '2338379' '2251370'
 '2216831' '563713' '3183823' '7918170' '840511' '735161' '867376'
 '2001102' '677003' '644918' '477186' '817165' '342289' '1981126'
 '1692516' '7985469' '1888095' '1920710' '3847805' '4505169' '4731158'
 '3592545' '3208320' '2805036' '3085715' '3796280' '2808360' '2492589'
 '2503068' '2296893' '761803' '3362732' '1786034' '2781980' '1840925'
 '2307414' '4290766' '4730237' '1997954' '2912751' '3851086' '3476246'
 '3486160' '3356893' '2499433']
['nd' '155' '165' '152' '154' '157' '150' '159' '158' '164' '156' '162'
 '147' '153' '160' '166' '163' '170' '168' '178' ' -' '169' '174' '172'
 '167' '180' '175' '171' '171.5' '173.5' '177' '151' '148' '176' '173'
 '161' '174.5' '172.5' '182' '176.5' '179' '186']
['nd' '40' '57' '55' '53' '50' '60' '44' '45' '48' '62' '58' '60.5' '57.5'
 '61' '49' '59' '65' '52' '56' '47' '64' '58.5' '76' '74' '79' '80' '66'
 '70' '85' '85.5' '78' ' -' '68' '73' '77.5' '72' '41' '61.5' '63' '71'
 '75' '67' '43' '67.5' '51' '77' '69' '54' '46' '36' '51.5' '83' '81' '84'
 '101.5' '69.5' '72.5' '82' '42' '78.5' '73.5' '55.5' '64.5' '53.5' '48.5'
 '115' '121.5' '103' '68.5']
['nd' 'n' ' -' 'y']
['nd' '4.63' '7.15' '4.82' '4.95' '5.47' '4.23' '4.96' '4.67' '4.72'
 '5.69' '4.52' '4.34' '4.79' '6.54' '6' '4.75' '5.32' '5.19' '5.05' '5'
 '3.97' '4.51' '6.14' '4.22' '4.71' '4.57' '4.19' '5.06' '5.07' '4.5'
 '6.37' '6.81' '4.61' '4.3' '3.9' '5.9' '4.76' '4.85' '4.46' '4.9' '4.69'
 '4.27' '6.3' '3.13' '4.54' '4.01' '4.65' ' -' '4.33' '4.86' '4.88' '5.02'
 '4.92' '4' '4.48' '5.22' '4.55' '8.48' '13.88' '6.97' '7.72' '9.77'
 '7.18' '6.22' '8.4' '8.62' '6.6' '8.11' '6.73' '12.21' '7.52' '7.93'
 '7.33' '8.17' '6.96' '7.94' '8.51' '7.07' '10.44' '9.5' '7.73' '9.67'
 '9.26' '7.67' '9.56' '7.42' '11.6' '9.72' '7.43' '4.73' '4.11' '5.29'
 '5.66' '5.99' '8.97' '6.18' '4.93' '5.45' '5.95' '4.18' '4.08' '4.32'
 '5.26' '4.26' '4.94' '4.58' '6.82' '5.27' '7.12' '9.3' '8.3' '7.32'
 '11.01' '8.47' '7.6' '4.31' '12.5' '9.7' '7.25' '9.85' '10.78' '16.16'
 '7.5' '11.09' '5.33' '7.39' '10.8' '13.39' '10.08' '8.78' '7.23' '8.9'
 '16.5' '13' '9.96' '7.2' '11.23' '13.94' '8.39' '10.67' '7.8' '9.32'
 '8.87' '6.78' '12.85' '11.93' '16.59' '10.1' '7.1' '8.68' '10.83' '9.97'
 '8.32' '11.73' '8.38' '11.2' '6.99' '12.93' '5.8' '5.36' '5.4' '5.44'
 '5.62' '4.8' '5.68' '5.35' '5.16' '5.57' '5.82' '5.31' '5.61' '5.81'
 '7.3' '5.14' '5.88' '5.46' '5.25' '7.26' '7.83' '9.52' '9.95' '6.2'
 '6.47' '8.81' '9.09' '9.47' '6.27' '5.18' '5.23' '5.09' '5.41' '5.53'
 '5.73' '5.54' '5.7' '5.83' '5.6' '9.38' '7' '6.36' '8.8' '9.8' '12.71'
 '8.7' '9.6' '10.12' '11.7' '12.8' '4.74' '4.91' '5.51' '4.66' '4.83'
 '5.43' '5.71' '5.08' '8.92' '4.38' '4.97' '5.64' '5.5' '5.65' '6.21'
 '10.68' '8.71' '6.5' '12.6' '9.81' '10.2' '8.94' '8.5' '8.93' '12.38'
 '11.53' '10.28' '8.28' '7.14' '9.2' '9.13' '8.13' '11.4' '14' '8' '14.35'
 '33' '9.4' '13.12' '10.4']
['nd' '116' '130' '-' '126' '120' '110' '123' '112' '140' '107' '102'
 '129' '131' '124' '155' '128' '119' '106' '115' '92' '146' '135' '137'
 '109' '133' '122' '145' '118' '84' ' -' '210' '138' '103' '134' '150'
 '165' '125' '111' '117' '132' '139' '95' '136' '114' '160' '105' '100'
 '163' '108' '90' '121' '179' '142' '147' '127']
['nd' '70' '80' '-' '75' '78' '60' '69' '68' '90' '65' '63' '61' '85' '87'
 '62' '79' '95' '81' '92' '59' '76' '71' '72' '73' '53' ' -' '121' '77'
 '94' '100' '67' '64' '66' '74' '45' '82' '114' '97' '89' '86' '84' '83']
['nd' '-' '5.07' '9.62' '5.94' '7.31' '7.83' '4.69' '5.92' '6.13' '5.44'
 '4.75' '11.23' '7.78' '7.65' '7.74' '8.42' '8.54' '4.48' '5.03' '7.38'
 '9.81' '4.82' '6.2' ' -' '4.15' '12.5' '13.25' '14.24' '5.89' '8.76'
 '17.83' '2.25' '7.82' '9.84' '6.28' '8.52' '10.18' '16.5' '9.47' '11.3'
 '15.23' '7.57' '9.39' '8.3' '15.87' '11.9' '15.04' '19.57' '8.45' '17.32'
 '10.2' '18.1' '7.42' '15.12' '14.6' '15.36' '19.19' '13.81' '4.5' '2.75'
 '25.58' '3.95' '8.24' '6.18' '10.44' '7.14' '5.64' '13.22' '34.6' '12.29'
 '2.89' '23.93' '29' '20.01' '26.5' '11.34' '8.82' '10.05' '10.69' '7.93'
 '14.1' '13.06' '11.39' '15.64' '23.16' '9.87' '28.71' '18.51' '13.18'
 '25.19' '13.56' '13.7' '15.4' '17.66' '19.14' '9.14' '14.48' '8.72'
 '20.19' '25.49' '7.06' '14.5' '22.37' '15.3' '16.8' '12.08' '9.06'
 '15.08' '18.82' '11.5' '17.15' '19.31' '18.7' '19.69' '13.8' '18.36'
 '16.55' '16.97' '7.3' '15.57' '7.46' '6.29' '3.83' '13.4' '4.05' '6.35'
 '12.26' '14.55' '11.25' '1.6' '17.7' '13.97' '10.83' '18.85' '15.31'
 '20.78' '12.25' '32.77' '17.6' '14.79' '21.5' '11.28' '18.21' '22.01'
 '14.52' '15.92' '5.23' '32.02' '6' '5.31' '10.71' '8.63' '7.11' '34.47'
 '5.42' '5.87' '30.49' '14.36' '14.12' '17.38' '16.71' '13.5' '16.88'
 '8.78' '6.73' '15.6' '19.28' '7.7' '14.27' '10.28' '14.02' '7.58' '12.74'
 '18.52' '21.28' '16.89']
['nd' '-' ' -' '3' '4.54' '1.49' '2.11' '0.57' '0.11' '1.14' '1.43' '0.21'
 '1.75' '1.33' '3.67' '2.41' '0.2' '1.15' '2.36' '1.31' '2.29' '1.29'
 '2.31' '1.41' '0.04' '1.13' '1.1' '1.42' '2.76' '0.93' '1.65' '0.64'
 '1.36' '2.58' '2.61' '0.87' '1.35' '3.79' '3.35' '2.37' '1.81' '2.98'
 '1.6' '1.08' '0.62']
['nd' '5.2' '5.1' '6.2' '5.3' '5.7' '5.4' '4.9' '5.5' '5.8' '5.6' '5.9'
 '6.9' '4.8' '4.2' '6.1' ' -' '6.3' '11' '8.7' '7.9' '11.3' '6.8' '7.3'
 '10.2' '12.8' '7.5' '13.1' '10.6' '7' '8.3' '9.8' '9.4' '9.7' '6.5' '8.5'
 '10.3' '12.5' '6.4' '11.8' '6' '5' '4.7' '-' '10.8' '9.1' '10.5' '9.9'
 '7.7' '12.1' '11.4' '12.2' '8.8' '7.2' '9.3' '11.2' '13.3' '11.1' '13.6'
 '8.6' '8' '11.7' '9.6' '7.6' '6.7' '7.4' '7.1' '9' '9.5' '8.2' '13.8'
 '6.6' '8.1' '12']
['nd' '1.18' '1.55' '1.47' '0.73' '0.9' '0.45' '0.8' '0.88' '1.01' '0.59'
 '2.68' '0.42' '0.97' '0.55' '1.36' '0.52' '1.5' '2.2' '0.84' '2.05'
 '0.63' '2.3' '0.96' '1.06' '1.07' '2.02' '5.02' '1.61' '1.26' '0.68'
 '1.53' '1.35' '1.04' '2.73' '1.73' '1.92' '1.25' '1.3' '1.79' '0.69'
 '1.4' '1.64' '2.23' '1.27' '1.22' '1.2' '0.71' '-' ' -' '0.87' '3.05'
 '1.69' '1.82' '2.92' '2.09' '3.69' '1.97' '2.76' '1.44' '2.16' '2.85'
 '2.13' '1.51' '1.59' '3.01' '1.48' '4.96' '2.26' '2.07' '1.71' '2.04'
 '3.26' '2.38' '3.66' '2.52' '4.7' '1.23' '1.11' '1.43' '1.16' '2.18'
 '0.94' '0.79' '1.02' '0.83' '0.93' '2.81' '2.88' '0.58' '0.6' '1.88'
 '2.51' '1.86' '2.58' '0.67' '1.29' '3.36' '1.46' '2.31' '1.28' '1.89'
 '1.37' '2.03' '3.48' '1.65' '4.14' '1.85' '1.75' '3.52' '1.58' '1.24'
 '3.03' '2.45' '2.46' '0.77' '3.04' '2.06' '3.14' '0.44' '0.48' '0.56'
 '1.34' '1.39' '2.55' '1.32' '1.7' '1.68' '2.63' '0.82' '0.76' '1.87'
 '1.8' '1.49' '2.21' '1.98' '2.57' '1.42' '2.19' '1.17' '1.6' '2' '0.99'
 '1.13' '1.57' '1.76' '4.36' '2.35' '4.54' '1.67' '4.85' '2.72' '0.81'
 '0.65' '1.31' '1.96' '1.99' '0.98' '2.56' '1.12' '1.14' '1.83' '1.94'
 '2.95' '2.33' '2.6' '2.43' '1.72' '1.54' '2.08' '0.86' '2.24' '2.65'
 '2.9' '1.03' '2.12' '1' '8.71' '0.46' '4.94' '2.62' '3.11' '2.54' '8.32'
 '4.21' '2.17' '0.5' '0.91' '4.04']
['nd' '4.87' '5.08' '5.04' '4.09' '4.7' '4.95' '7.07' '5.84' '6.55' '5.75'
 '7.15' '4.32' '4.21' '4.49' '4.9' '5.03' '5.27' '4.67' '4.82' '5.22'
 '4.43' '4.81' '3.85' '4.51' '3.64' '4.06' '4.25' '6.28' '5.2' '5.88'
 '4.17' '5.98' '4.77' '4.4' '4.91' '6.92' '5.72' '5.74' '4.53' '5.67'
 '3.79' '3.97' '4.41' '5.51' '4.55' '3' '6.33' '4.58' '6.38' '4.63' '4.36'
 '3.36' '-' ' -' '4.62' '4.34' '3.59' '5.63' '9.11' '5.02' '3.54' '4.13'
 '3.62' '4.46' '4.84' '6.27' '4.8' '5.69' '4.99' '6.35' '4.2' '4.35' '5.5'
 '5.12' '4.23' '5.1' '5.6' '4.72' '6.01' '5.57' '4.93' '4.78' '5.49'
 '5.46' '4.76' '6.57' '5.47' '3.87' '4.33' '5.25' '4.6' '3.2' '3.94'
 '4.92' '4.71' '3.81' '3.71' '5.56' '7.01' '6.13' '5.93' '4.05' '6.25'
 '4.44' '6.2' '5.82' '4.88' '5.53' '5.35' '4.29' '6.5' '4.85' '8.73'
 '4.64' '5.16' '5.32' '4.65' '5.91' '4.89' '3.96' '4.16' '6.09' '6.08'
 '3.93' '3.05' '4.03' '6.48' '4.01' '5.39' '3.76' '5.7' '3.52' '5.77'
 '1.03' '3.89' '3.7' '4.1' '5.61' '1.98' '3.46' '7.82' '5.18' '5.29' '5.3'
 '6.16' '5.94' '5.01' '4.59' '5.24' '4.47' '6.21' '4.5' '6.03' '6.05'
 '6.72' '5.14' '6.32' '5.31' '4.31' '5.41' '5.13' '6.73' '5.52' '5.06'
 '5.17' '5.78' '5.99' '5.05' '5.44' '6.11' '5.54' '4.18' '4.48' '4.75'
 '5.36' '5.95' '6.74' '6.71' '5.23' '3.49' '5.9' '5.59' '7.04' '4.94'
 '6.4' '5.21' '4.12' '7.13' '6.56' '5.89' '6.18' '6.07' '4.98' '5.62'
 '4.57' '6.24' '6.12' '7.1' '2.33' '1.24' '5.26' '4.42' '5.65' '3.9'
 '5.83' '2.25' '3.01' '5.11' '5.81' '8.27' '7.43' '6.7' '7.5' '3.67' '3.3']
['nd' '1.61' '1.11' '1.36' '1.46' '1.6' '2' '1.94' '1.58' '1.3' '1.45'
 '0.89' '1.63' '0.84' '1.44' '1.59' '1.05' '1.23' '1.01' '1.06' '1.5'
 '1.72' '1.31' '1.12' '0.78' '0.97' '1.04' '1.7' '1.92' '-' '1.65' '1.2'
 '1.15' '1.37' '1.52' '1.53' '1.32' '0.75' '0.76' '1.34' '0.62' '1.24'
 '1.03' '2.12' '1.51' ' -' '1.28' '0.88' '0.93' '0.72' '1.08' '1.43'
 '0.68' '1.09' '0.86' '0.96' '1.27' '1.25' '1.18' '0.99' '0.91' '1.26'
 '1.14' '0.74' '1.13' '0.8' '0.77' '1.21' '0.83' '1.35' '1.71' '0.98'
 '1.1' '0.94' '1.33' '0.66' '0.9' '1.22' '1.02' '0.81' '1' '1.17' '0.92'
 '1.39' '1.07' '1.19' '2.16' '0.67' '0.73' '4.38' '0.87' '2.7' '0.35'
 '1.16' '3.1' '1.47' '1.41' '1.78' '1.56' '1.49' '0.79' '0.85' '1.4'
 '1.38' '1.29' '4.71' '1.8' '2.06' '1.54' '1.48' '2.03' '1.68' '0.82'
 '2.07' '6.79' '1.82' '0.49' '1.86' '0.7' '1.88' '0.71' '0.45' '2.11'
 '2.49' '2.82' '2.72' '2.21' '2.27' '2.53' '2.35' '1.91' '2.56' '2.22'
 '2.2' '2.62' '1.9' '2.34' '2.77' '1.79' '1.74' '2.79' '2.3' '2.85' '2.18'
 '2.46' '2.14' '1.76' '1.42' '2.02' '1.83' '1.55' '1.85' '2.23' '2.1'
 '2.25' '3.3' '2.01' '1.64' '1.75' '2.88' '1.93' '1.81' '1.66' '1.67'
 '1.77' '1.62' '0.3' '0.95' '2.39' '1.87']
['nd' '2.49' '2.93' '2.76' '1.89' '2.89' '2.25' '4.39' '2.88' '4.23'
 '3.39' '4.25' '2.36' '2.87' '2.52' '2.96' '3.51' '2.81' '3.04' '0.72'
 '3.83' '3.72' '3.2' '3.32' '3.18' '2.2' '3.03' '1.06' '2.75' '4.19'
 '3.46' '3.26' '2.21' '3.25' '2.71' '3.07' '2.07' '4.35' '3.88' '4.02'
 '2.08' '2.5' '2.66' '4.13' '2.83' '1.79' '4.16' '3.35' '2.24' '2.59'
 '3.02' '1.72' '-' ' -' '4.55' '0.14' '3.27' '3.43' '7.12' '2.51' '2.18'
 '2.29' '1.71' '3.01' '3.38' '4.33' '3.4' '4.63' '3.7' '3.08' '5.04'
 '3.89' '3.81' '3.06' '3.62' '3.24' '3.52' '4.26' '3.13' '4.1' '2.98'
 '4.9' '3.76' '2.3' '4.41' '3.47' '3.1' '3.59' '4.45' '3.54' '3.93' '2.27'
 '2.46' '3.22' '3.68' '1.76' '2.86' '2.54' '3.29' '2.63' '2.8' '2.22'
 '2.37' '3.37' '2.79' '3.36' '3.86' '4.12' '3.82' '2.74' '4.6' '2.64'
 '4.49' '3.66' '2.69' '2.48' '4.06' '4.04' '3.44' '4.27' '2.6' '6.26'
 '2.99' '3.6' '2.82' '3.21' '2.34' '3.12' '3.99' '1.95' '2.41' '4.66'
 '4.03' '2.39' '4.61' '2.23' '2.44' '2.55' '1.3' '4.01' '1.38' '2.17'
 '2.62' '5.61' '2.56' '4.15' '3.73' '4.14' '2.9' '3.33' '4.07' '3.78'
 '2.7' '3.45' '4.73' '4.21' '4.24' '3.64' '2.95' '3.95' '3.98' '4.58'
 '4.85' '3.61' '2.91' '2.38' '3.94' '3.14' '3' '4.44' '2.97' '3.28' '3.67'
 '2.45' '2.1' '4.08' '3.71' '4.81' '2.77' '3.31' '4.79' '3.53' '2.73'
 '5.15' '2.85' '4.62' '4.31' '3.5' '4.68' '3.74' '3.91' '3.8' '1.8' '3.3'
 '4.17' '5.1' '1.58' '2.53' '4.11' '3.92' '3.79' '4.95' '1.59' '5.38'
 '3.49' '2.94' '2.14' '2.65' '3.87' '2.11' '3.96' '4.99' '3.15' '2.68'
 '1.97' '2.12' '3.57' '3.9' '1.66' '1.96' '1.87' '1.81' '3.65' '4.64'
 '3.19' '4.57' '1.82' '2.15' '4.4' '2.03' '2.42' '2.02' '1.75' '2.43'
 '2.19' '1.62' '3.63' '1.46' '4.78' '2.61' '3.23' '2.72' '5.85' '1.68'
 '1.77' '1.91' '3.85' '3.69' '2.26' '1.25' '2.84' '2.4' '1.52' '4' '1.19'
 '4.36' '3.17' '3.84' '1.36' '5.2' '4.83' '4.76' '3.75']
['nd' 'mbio_kit_food' 'qiagen_ministool']
['nd' '4' '5' '3' '2' '1']
['nd' '2' '1']
['nd' 'igt' 'ngt' 't2d']
['nd' '0' '1.8' '0.1' '0.7' '0.2' '0.5' '0.8' '0.4' '0.3' '0.6' '0.9'
 '4.7' '2' '1' '3' '56.6' '1.3' '1.6' '1.2' '1.1' '2.5' '1.5' '1.7' '2.2'
 '2.3']
['nd' '0.79' '0.82' '0.86' '0.95' '0.91' '0.89' '0.9' '0.78' '0.84' '0.87'
 '0.74' '0.73' '0.94' '0.98' '0.83' '0.85' '0.88' '0.92' '0.81' '0.8'
 '0.75' '0.77' '0.93' '0.96' '0.99' '0.97' '1.05']
['nd' '85' '93' '94' '104' '78' '84' '115' '80' '87' '92' '67' '69' '102'
 '79' '83' '105' '91' '82' '88' '81' '74' '90' '96' '86' '77' '100' '95'
 '71' '89' '98' '110' '103' '66' '70' '108' '106' '101' '109' '117' '97'
 '76' '75']
['nd' '5.2' '5.73' '5.49' '5.18' '6.67' '6.09' '4.7' '5.84' '7.62' '6.04'
 '6.14' '6.47' '6.88' '5.56' '5.26' '4.83' '5.29' '5.23' '5.55' '4.91'
 '7.01' '5.48' '6.74' '5.85' '6.1' '6.08' '4.81' '5.24' '4.41' '5.39'
 '6.24' '5.41' '6.65' '6.35' '6.51' '4.15' '3.82' '6.48' '4.48' '6.45'
 '5.25' '5.82' '6.28' '7.05' '5.71' '4.4' '4.8' '6.72' '4.25' '4.11'
 '4.19' '6.23' '5.1' '4.38' '3.53' '6.43' '6.15' '6.58' '5.02' '5.35'
 '7.1' '5.34' '4.73' '4.12' '5.4' '6.4' '4.94' '5.43' '4.92' '6.39' '3.72'
 '4.51' '4.28' '3.75' '6.3' '6.6' '6.01' '3.5' '4.61' '6.99' '5.88' '5.38'
 '5.15' '3.87' '5.72' '8.71' '4.47' '4.32' '5.74' '3.78' '4.97' '3.71'
 '5.31' '4.9' '5.42' '5.75' '5.37' '4.6' '5.59' '4.04' '6.03' '3.95'
 '3.92' '5.91' '3.56' '6.42' '5.51' '4.52' '5.83' '6.83' '4.71' '3.42'
 '5.07' '7' '4.39' '5.61' '7.46' '5.05' '4.17' '5.66' '7.44' '5.8' '5.65'
 '6.55']
['nd' '0.95' '0.93' '0.61' '0.55' '0.99' '1.15' '1.89' '1.54' '0.92'
 '1.36' '1.01' '1.17' '0.42' '0.83' '1.5' '0.67' '0.6' '1.22' '0.78'
 '1.31' '3.28' '0.73' '0.91' '1.03' '0.68' '0.84' '0.71' '2.04' '0.88'
 '1.44' '0.63' '1.18' '1.68' '0.9' '1.35' '1.09' '0.54' '1.73' '0.85'
 '2.34' '1.14' '0.94' '0.98' '2.01' '1.32' '1.02' '2.08' '0.96' '0.69'
 '1.42' '1.2' '4' '1.95' '3.64' '1.26' '2.88' '0.49' '1.43' '1.27' '1.57'
 '0.65' '1.58' '2.59' '1.64' '1.06' '0.86' '1.56' '2.22' '1.37' '0.44'
 '2.1' '0.75' '1.11' '1.76' '3.56' '0.76' '1.13' '1.04' '0.79' '1' '3.46'
 '0.58' '3.33' '0.97' '0.7' '1.74' '2.3' '1.23' '0.66' '1.24' '1.08'
 '3.07' '0.8' '1.62' '1.25' '2.36' '1.55' '2.15' '1.67' '1.63' '6.35']
['nd' '63' '58' '74' '68' '114' '71' '85' '94' '72' '62' '97' '75' '52'
 '65' '61' '90' '53' '66' '76' '59' '70' '44' '69' '64' '60' '56' '80'
 '112' '182' '92' '73' '67' '54' '77' '57' '110' '81' '47' '49' '93' '55'
 '89' '50' '132' '95' '78' '48']
['nd' '0.14' '0.37' '0.58' '0.26' '0.61' '0.66' '0.9' '1.2' '0.15' '0.24'
 '0.21' '0.18' '0.29' '0.7' '0.25' '0.28' '0.34' '0.23' '0.53' '1.9'
 '0.36' '0.2' '2.3' '0.42' '0.57' '0.41' '0.51' '0.3' '0.22' '0.35' '4.6'
 '0.52' '0.45' '0.44' '0.47' '0.43' '0.32' '0.68' '0.38' '0.54' '0.27'
 '0.63' '0.73' '0.96' '1.5' '1.3' '1.4' '0.55' '0.33' '0.97' '1.8' '0.5'
 '0.56' '0.83' '0.74' '2.6' '0.79' '0.46' '0.19' '1' '0.8']
['nd' '5.4' '5.9' '5.3' '4.5' '6.3' '5.7' '4.7' '5' '4.9' '5.8' '5.6' '11'
 '4.6' '7.9' '6.5' '16.5' '5.2' '6.6' '5.5' '6.7' '6.9' '5.1' '6' '6.8'
 '6.4' '6.1' '10.7' '8.2' '8.3' '4.8' '11.2' '6.2' '12.1' '7.3' '7.5'
 '8.8' '7.6' '8.7' '7.4' '7' '8.6' '7.2' '4.2' '9' '4.4' '13.1' '-' '8.5'
 '7.7' '14.2' '7.8' '4.1' '9.8' '3.9']
['nd' '7' '7.7' '4.4' '12' '10' '31' '27' '6.7' '9.8' '7.1' '5.5' '5.2'
 '9.6' '4.9' '5.4' '4.6' '23' '33' '13' '7.4' '6.8' '6.4' '8.3' '8' '5.7'
 '16' '8.9' '11' '4.8' '6.3' '14' '6.1' '6.2' '7.3' '7.9' '5' '4.7' '36'
 '8.7' '6.6' '8.5' '6.9' '9' '41' '47' '19' '8.8' '3.7' '4.5' '7.2' '15'
 '2.8' '9.4' '6.5' '5.1' '3.1' '6' '18' '22' '4.2' '9.2' '3.9' '66' '17'
 '51' '3' '9.7' '4' '8.1' '5.8' '3.5' '7.8' '57' '25']
['nd' '33' '34' '36' '37' '38' '53' '35' '40' '42' '59' '43' '41' '46'
 '44' '31' '76' '52' '48' '45' '50' '26' '51' '63' '32' '65' '56' '49'
 '77' '58' '47' '27']
['nd' '13' '13.1' '12.3' '12.2' '15.6' '11.7' '7' '6.75' '17.4' '16.4'
 '21.1' '27.6' '16.5' '10.5' '21.4' '20.1' '22.2' '19' '6.43' '7.34' '28'
 '14.8' '11.8' '17.8' '11.9' '14.4' '34.8' '7.49' '24.8' '11.3' '10.1'
 '8.54' '24.6' '13.2' '23.3' '20.6' '20.7' '10.9' '15.1' '20.5' '9.34'
 '14.1' '15.5' '30.2' '16.2' '8.5' '11.4' '17.1' '9.65' '11.6' '11' '15.7'
 '9.28' '15.8' '8.59' '16.8' '15.2' '10' '6.85' '13.5' '12.1' '14.5'
 '14.2' '8.9' '26.3' '15' '6.1' '8.2' '10.3' '9.78' '8.45' '10.2' '21.6'
 '19.6' '12.7' '8.91' '15.3' '9.52' '21.8' '9.61' '6.48' '9.87' '10.7'
 '8.82' '9.11' '9.9' '7.67' '11.1' '15.4' '12' '7.3' '8.29' '18.3' '18.8'
 '16.3' '4.69' '8.67' '-' '8.53' '9.7' '8.17' '8.8' '3.68' '17.7' '4.39'
 '9.55' '19.2' '9.84' '21.3' '7.46' '5.64' '8.13' '9.67' '26.6' '12.9'
 '7.81' '9.36']
['nd' '22.5' '39.4' '23' '72.1' '4.75' '25.4' '29.6' '105' '11.3' '22.9'
 '14.5' '42.6' '6.16' '8.49' '33.4' '8.96' '11.4' '12.2' '7.14' '34.7'
 '36.4' '49.4' '12.5' '15.4' '14.7' '21.3' '13.2' '10.1' '23.4' '15.1'
 '28.5' '28.2' '8.12' '11.5' '7.02' '57.1' '37.6' '38.5' '28' '36' '6.21'
 '7.01' '19.9' '10.9' '20.1' '8.53' '19.1' '44.9' '21.1' '8.79' '45.2'
 '27' '18.8' '23.2' '17.1' '14.8' '30.3' '28.4' '21.7' '57.5' '16.1'
 '35.2' '40.3' '48.2' '14.6' '21.4' '3.58' '7.33' '21.2' '29.8' '29.5'
 '6.98' '2.17' '48.9' '29.7' '40.4' '32.9' '13.1' '37.8' '77.7' '21.6'
 '49.9' '18.5' '13' '10.4' '35.8' '53.6' '14.1' '25.1' '17' '16.5' '7.28'
 '3.59' '15.8' '29.1' '25.7' '43.5' '7.11' '33.8' '18.2' '25.6' '26'
 '5.28' '31.8' '20.6' '3.92' '57.7' '5.49' '10.3' '36.6' '31.4' '5.6' '-'
 '19.6' '44' '12.6' '32.4' '35' '16.2' '5.47' '91.8' '37.5' '49.1' '23.3'
 '28.9' '31.7' '36.3' '42.1' '7.06']
['nd' '1' '0.1' '0.7' '0.8' '-' '1.4' '0.6' '0.3' '0.9' '0.4' '4.8' '16'
 '1.7' '1.5' '1.1' '1.3' '0.5' '0' '1.6' '11.2' '7.5' '3.4' '3.6' '0.2'
 '2' '1.8' '3.1' '4.6' '1.2' '2.5' '4.5' '3.3' '2.2' '1.9' '8.9' '3' '2.1'
 '3.5' '17.8' '5.9' '3.8' '13.1' '4' '2.7']
['nd' '202.14' '149.89' '108.38' '156.83' '100.46' '-' '147.82' '138.55'
 '122.88' '172.94' '91.32' '85.29' '66.99' '131.88' '56.02' '33.33'
 '172.68' '115.77' '131.9' '253.37' '99.15' '158.25' '168.9' '54.27'
 '67.19' '55.88' '220.89' '188.26' '120.59' '72' '100.14' '306.87' '73.53'
 '97.98' '73.58' '82.53' '344.52' '98.57' '77.77' '260.83' '79.48'
 '125.01' '202.04' '172.12' '50.89' '455.48' '114.86' '36.12' '90.97'
 '146.48' '123.56' '158.27' '111.89' '103.25' '87.99' '68.8' '49.67'
 '58.24' '297.92' '69.8' '65.28' '70.38' '91.03' '125.85' '91.9' '76.69'
 '89.17' '75.4' '199.62' '173.53' '273.73' '155.23' '61.66' '119.19'
 '102.69' '48.04' '49.3' '374.99' '100.73' '782.18' '107.27' '63.05'
 '109.15' '86.25' '123.71' '80.72' '71.51' '82.18' '155.25' '172.73'
 '176.5' '228.33' '140.3' '544.12' '295.9' '59.25' '219.58' '149.5'
 '63.13' '76.65' '71.52' '54.88' '97.11' '59.85' '99.42' '311.24' '137.13'
 '126.98' '73.08' '113.79' '315.21' '16.4' '62.57' '56.69' '56.47' '54.12'
 '255.56' '109.28' '521.85' '30.76' '97.35' '160.61' '57.14' '253.72'
 '110.08' '206.06' '142.31' '61.97' '130.04' '52.1' '215.11']
['nd' '0.69' '1.12' '2.16' '1.13' '0.39' '0.68' '26.51' '11.37' '0.82'
 '0.56' '1.27' '7.68' '1.5' '0.6' '6.48' '1.9' '0.51' '1.15' '2.98' '3.54'
 '6.25' '4.55' '0.94' '2.04' '1.09' '1.02' '14.92' '0.71' '2.77' '2.4'
 '3.52' '1.69' '0.83' '1.26' '2.26' '0.21' '1.07' '5.68' '0.49' '3.14'
 '0.13' '0.67' '1.54' '1.24' '7.05' '0.63' '1.44' '1.55' '3.84' '3' '1.52'
 '1.28' '7.03' '13.56' '5.67' '1.49' '1.34' '1.36' '4.11' '4.64' '2.88'
 '1.38' '1.53' '0.34' '1.81' '3.53' '1.21' '0.9' '0.77' '38.95' '2' '2.48'
 '0.85' '2.23' '3.2' '2.53' '3.48' '7.5' '2.37' '11.82' '2.38' '2.52'
 '3.29' '0.93' '2.62' '0.81' '1.46' '99.22' '0.58' '1.78' '7.64' '1.37'
 '1.31' '2.28' '10.87' '2.84' '1.25' '7.93' '0.64' '0.99' '12.36' '1.62'
 '5.21' '1.1' '27.15' '1.33' '0.38' '1.86' '1.06' '0.41' '13.16' '4.91'
 '1.08' '3.85' '0.65' '1.47' '1.84' '13.2' '3.26' '1.32' '1.18' '4.48'
 '2.35' '0.42' '21' '10.06']
['nd' '0.74' '0.61' '0.51' '0.9' '0.5' '1.14' '1.78' '1.84' '0.72' '0.79'
 '0.64' '0.56' '0.49' '0.7' '2.7' '0.44' '0.55' '0.58' '1.58' '2.6' '0.93'
 '0.73' '0.66' '0.53' '0.75' '1.25' '0.81' '0.83' '0.94' '1.22' '1.35'
 '0.92' '0.77' '0.84' '0.71' '1.18' '0.89' '0.63' '0.68' '0.54' '2' '0.62'
 '0.87' '0.91' '0.98' '0.78' '0.8' '0.97' '0.41' '0.59' '1.07' '0.31'
 '1.06' '1.21' '1.47' '1.12' '0.67' '0.99' '0.95' '1.3' '1.16' '1.38'
 '1.37' '1.36' '0.46' '1.2' '0.88' '0.34' '1.32' '1.72' '1.11' '0.12'
 '0.85' '0.29' '0.65' '1.4' '0.4' '1' '2.8' '1.6' '0.52' '1.03' '1.08'
 '0.69' '1.52']
['nd' '1.77' '2.9' '1.04' '2.83' '0.96' '2.76' '2.27' '2.94' '3.62' '1.8'
 '2.37' '0.81' '1.46' '1.82' '2.52' '1.07' '0.75' '2.92' '1.43' '1.86'
 '2.78' '1.72' '2.06' '1.84' '0.85' '1.6' '1.28' '2.09' '1.31' '1.66'
 '1.57' '3.19' '2.23' '1.33' '2.42' '2.47' '2.22' '0.95' '1.56' '1.01'
 '1.47' '3.21' '2.26' '2.56' '2.36' '1.45' '4.27' '2.31' '3.28' '2.08'
 '6.74' '1.55' '1.16' '1.15' '1.23' '1.22' '3.34' '1.54' '2.38' '1.78'
 '2.14' '2.43' '2.62' '2.69' '1.91' '1.58' '1.79' '2.77' '2.18' '4.87'
 '1.76' '0.94' '2.65' '6.11' '1.92' '2.05' '2.54' '1.63' '2.03' '1.03'
 '2.25' '3.86' '2.21' '2.16' '3.89' '1.88' '1.21' '1.52' '3.52' '1.71'
 '3.81' '2.71' '1.67' '7.1' '4.14' '1.65' '2.12' '3.74' '3.3' '3.48'
 '1.98' '2.44' '2.29' '1.39' '0.86' '1.37' '2.79' '2.2' '2.04' '3.01' '3'
 '1.08' '2.53']
['nd' '0.85' '0' '-' '2.41' '1.74' '6' '0.63' '1.02' '1.65' '0.6' '0.14'
 '2.05' '4.64' '0.26' '5.77' '9.56' '1.42' '16.85' '2.73' '11.91' '12.89'
 '1.44' '3.31' '0.82' '3.82' '2.23' '6.65' '9.54' '0.55' '0.1' '7.29'
 '1.73' '6.4']
['nd' '941.35' '766.32' '522.14' '767.02' '806.45' '-' '1107.28' '1004'
 '637.54' '814.43' '810.44' '918.41' '639.78' '476.37' '1073.95' '710.69'
 '608.62' '932.26' '765.62' '1348.58' '966.14' '1224.79' '655.61' '333.52'
 '913.25' '567.92' '867.17' '585.88' '464.81' '1006.04' '1163.37' '690.95'
 '817.84' '603.82' '807.93' '276.65' '894.44' '894.24' '889.07' '501.25'
 '688.31' '564.43' '617.9' '839.61' '765.46' '702.19' '602.49' '683.31'
 '745.27' '522.79' '635.58' '767.49' '657.49' '1033.03' '690.19' '676.39'
 '715.62' '389.8' '766.81' '989.69' '592.01' '641.53' '699.12' '458.06'
 '856.49' '704.67' '675.62' '552.14' '434.41' '977.02' '791.41' '559.32'
 '660.47' '148.95' '727.64' '523.9' '673.58' '873.32' '1179.49' '1312.23'
 '804.95' '109.75' '771.32' '1192.01' '552.25' '332.07' '711.86' '822.75'
 '254.49' '704.4' '779.93' '688.48' '356.51' '465.58' '717.03' '1079.71'
 '578.9' '862.85' '970.13' '415.85' '902.35' '651.95' '763.23' '865.49'
 '556.64' '861.83' '1203.67' '1319.38' '901.43' '889.54' '2276.46'
 '1798.27' '890.01' '811' '1184.81' '764.42' '1061.43' '1169.62' '510.36'
 '1246.62' '1216.26' '677.67' '568' '1007.16' '1218.49' '1231.77' '655.19'
 '901.82' '703.12' '559.14' '816.53']
['nd' 'n' 'y']
['nd' 'n' 'y']
['nd' '-' 'met' 'sulph']
['nd' 'na' '40' '35' '38' '39' '24' '42' '59' '37' '60' '15' '33' '34']
['nd' 'na' 't3n1m1' 't3nxm1' 't1n0m0' 't2n0m0' 't2n1m1' 't4n1m0' 't4n1m1'
 't3n1m0' 't3n0m0' 't2n1m0' 't4n0m0' 't3n0m1' 't4n0m1']
['nd' 'na' 'iv' 'i' 'iii' 'ii']
['nd' 'lc' 'na' 'lc/rc' 'rc' 'rectum' 'sigma']
['nd' 'negative' 'positive']
['nd' 'negative' 'positive' 'na']
['nd' 'control' 'crc' 'na']
In [202]:
# rename and set index

france
Out[202]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
3343 WT2D -1.0 -1.0 stool n NaN NaN france Illumina 23719380.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3484 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3483 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3482 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3481 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3536 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3521 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3561 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

135 rows × 3513 columns

In [203]:
# rename and set index

france.reset_index()
Out[203]:
index dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 3343 WT2D -1.0 -1.0 stool n NaN NaN france Illumina ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 3484 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 3483 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 3482 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 3481 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
130 3536 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
131 3521 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
132 3561 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
133 3609 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
134 3608 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

135 rows × 3514 columns

In [204]:
#reset_index and rename and set index

france.reset_index(drop=True, inplace=True)
In [205]:
france
Out[205]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 WT2D -1.0 -1.0 stool n NaN NaN france Illumina 23719380.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
130 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
131 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
132 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
133 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
134 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

135 rows × 3513 columns

In [206]:
france.set_index("dataset_name")
Out[206]:
sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid camp ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
dataset_name
WT2D -1.0 -1.0 stool n NaN NaN france Illumina 23719380.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

135 rows × 3512 columns

In [207]:
france
Out[207]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 WT2D -1.0 -1.0 stool n NaN NaN france Illumina 23719380.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
130 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
131 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
132 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
133 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
134 Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

135 rows × 3513 columns

In [208]:
france.set_index("dataset_name",inplace=True)
In [209]:
france
Out[209]:
sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid camp ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
dataset_name
WT2D -1.0 -1.0 stool n NaN NaN france Illumina 23719380.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

135 rows × 3512 columns

In [210]:
france.rename({"disease":"subjectID","sampleID": "country"})
Out[210]:
sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid camp ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
dataset_name
WT2D -1.0 -1.0 stool n NaN NaN france Illumina 23719380.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

135 rows × 3512 columns

In [211]:
france.rename({"disease":"subjectID","sampleID": "country"},axis=1)
Out[211]:
country subjectID bodysite subjectID age gender country sequencing_technology pubmedid camp ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
dataset_name
WT2D -1.0 -1.0 stool n NaN NaN france Illumina 23719380.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

135 rows × 3512 columns

In [212]:
france
Out[212]:
sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid camp ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
dataset_name
WT2D -1.0 -1.0 stool n NaN NaN france Illumina 23719380.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

135 rows × 3512 columns

In [213]:
#nlargest and nsmallest
In [222]:
france.nlargest(n=10, columns="age")
Out[222]:
sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid camp ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
dataset_name
WT2D -1.0 -1.0 stool n NaN NaN france Illumina 23719380.0 nd ... 0.00000 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 nd ... 0.00000 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.00000 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.00000 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.00000 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.03756 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.00000 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.00000 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.00000 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 nd ... 0.00000 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

10 rows × 3512 columns

In [223]:
france.nlargest(n=10, columns="age").loc[:,"gender"]
Out[223]:
dataset_name
WT2D                             NaN
Zeller_fecal_colorectal_cancer   NaN
Zeller_fecal_colorectal_cancer   NaN
Zeller_fecal_colorectal_cancer   NaN
Zeller_fecal_colorectal_cancer   NaN
Zeller_fecal_colorectal_cancer   NaN
Zeller_fecal_colorectal_cancer   NaN
Zeller_fecal_colorectal_cancer   NaN
Zeller_fecal_colorectal_cancer   NaN
Zeller_fecal_colorectal_cancer   NaN
Name: gender, dtype: float64
In [226]:
france["disease"].value_counts().nlargest(10).plot.bar(ax=ax[1][0])
ax[1][0].set_title("Top 10 Diseases")
Out[226]:
Text(0.5, 1.0, 'Top 10 Diseases')
In [230]:
france.nsmallest(n=5,columns="pubmedid")
Out[230]:
sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid camp ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
dataset_name
WT2D -1.0 -1.0 stool n NaN NaN france Illumina 23719380.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool small_adenoma NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool n NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
Zeller_fecal_colorectal_cancer -1.0 -1.0 stool cancer NaN NaN france Illumina 25432777.0 nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

5 rows × 3512 columns

In [231]:
# value_counts()
top_100 = france.nlargest(n=100,columns="pubmedid")
In [233]:
top_100["pubmedid"].value_counts()
Out[233]:
pubmedid
25432777.0    100
Name: count, dtype: int64
In [234]:
top_100["pubmedid"].value_counts(normalize=True)
Out[234]:
pubmedid
25432777.0    1.0
Name: proportion, dtype: float64
In [235]:
top_100["pubmedid"].value_counts(normalize=True,ascending=False)
Out[235]:
pubmedid
25432777.0    1.0
Name: proportion, dtype: float64
In [236]:
top_100["pubmedid"].value_counts(normalize=True,ascending=True)
Out[236]:
pubmedid
25432777.0    1.0
Name: proportion, dtype: float64
In [237]:
top_100["pubmedid"].value_counts().plot.bar()
Out[237]:
<Axes: xlabel='pubmedid'>
No description has been provided for this image
In [238]:
data
Out[238]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1866 metahit -1.0 -1.0 stool n NaN NaN denmark Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1895 metahit -1.0 -1.0 stool ibd_crohn_disease NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1894 metahit -1.0 -1.0 stool n NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1893 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1892 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
622 doyle_bt2 -1.0 12311.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
621 doyle_bt2 -1.0 12271.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
620 doyle_bt2 -1.0 12221.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
626 doyle_bt2 -1.0 12351.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
581 doyle_bt2 -1.0 10151.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3513 columns

In [239]:
# sort_values

country
Out[239]:
1866     True
1895     True
1894     True
1893     True
1892     True
        ...  
622     False
621     False
620     False
626     False
581     False
Name: country, Length: 3610, dtype: bool
In [240]:
pubmedid
Out[240]:
TechnologyName Throughput Accuracy
0 25981789 1000 0.95
In [251]:
# aggfuncs + agg() & cumsum()

print("Min age:", data.age.min())
print("Max age:", data.age.max())
print("Mean age:", data.age.mean())
print("Median age:", data.age.median())
print("std age:", data.age.std())
print("Count number of rows in age:", data.age.count())
print("Sum of pubmedid age:", data.pubmedid.sum())
print("Mode dataset_name", data.dataset_name.mode()[0])

Min age: nan
Max age: nan
Mean age: nan
Median age: nan
std age: nan
Count number of rows in age: 0
Sum of pubmedid age: 72820910368.0
Mode dataset_name hmp
In [252]:
data.dataset_name.mode()[0]
Out[252]:
'hmp'
In [253]:
data["pubmedid"].quantile(0.8)
Out[253]:
25079328.0
In [254]:
0.61
data["pubmedid"].quantile(0.99)
Out[254]:
25981789.0
In [255]:
data.pubmedid.agg(["min", "max", "mean", "median", "std", "sum", "count"])
Out[255]:
min       2.020360e+07
max       2.598179e+07
mean      2.375886e+07
median    2.371938e+07
std       1.299564e+06
sum       7.282091e+10
count     3.065000e+03
Name: pubmedid, dtype: float64
In [256]:
data.pubmedid.cumsum()
Out[256]:
1866     20203603.0
1895     40407206.0
1894     60610809.0
1893     80814412.0
1892    101018015.0
           ...     
622             NaN
621             NaN
620             NaN
626             NaN
581             NaN
Name: pubmedid, Length: 3610, dtype: float64
In [259]:
pubmedid = data.loc[data.country == "pa" ,["gender", "age"]].groupby("age")["gender"].sum()
In [260]:
pubmedid
Out[260]:
Series([], Name: gender, dtype: float64)
In [261]:
pubmedid.cumsum()
Out[261]:
Series([], Name: gender, dtype: float64)
In [262]:
# qut and qcut
# cut
pd.cut(x = data["pubmedid"],bins=5)
Out[262]:
1866    (20197824.814, 21359240.2]
1895    (20197824.814, 21359240.2]
1894    (20197824.814, 21359240.2]
1893    (20197824.814, 21359240.2]
1892    (20197824.814, 21359240.2]
                   ...            
622                            NaN
621                            NaN
620                            NaN
626                            NaN
581                            NaN
Name: pubmedid, Length: 3610, dtype: category
Categories (5, interval[float64, right]): [(20197824.814, 21359240.2] < (21359240.2, 22514877.4] < (22514877.4, 23670514.6] < (23670514.6, 24826151.8] < (24826151.8, 25981789.0]]
In [263]:
pd.cut(x = data["pubmedid"],bins=5).value_counts()
Out[263]:
pubmedid
(22514877.4, 23670514.6]      1397
(24826151.8, 25981789.0]      1135
(23670514.6, 24826151.8]       423
(20197824.814, 21359240.2]     110
(21359240.2, 22514877.4]         0
Name: count, dtype: int64
In [269]:
pd.cut(x = data["pubmedid"],bins=[21359240.2,22514877.4, 23670514.6, 24826151.8, 25981789.0, ])
Out[269]:
1866    NaN
1895    NaN
1894    NaN
1893    NaN
1892    NaN
       ... 
622     NaN
621     NaN
620     NaN
626     NaN
581     NaN
Name: pubmedid, Length: 3610, dtype: category
Categories (4, interval[float64, right]): [(21359240.2, 22514877.4] < (22514877.4, 23670514.6] < (23670514.6, 24826151.8] < (24826151.8, 25981789.0]]
In [270]:
pd.cut(x = data["pubmedid"],bins=[21359240.2,22514877.4, 23670514.6, 24826151.8, 25981789.0, ]).value_counts()
Out[270]:
pubmedid
(22514877.4, 23670514.6]    1397
(24826151.8, 25981789.0]    1135
(23670514.6, 24826151.8]     423
(21359240.2, 22514877.4]       0
Name: count, dtype: int64
In [271]:
pd.cut(x = data["pubmedid"],bins=[21359240.2,22514877.4, 23670514.6, 24826151.8, 25981789.0, ],labels=["80s", "90s","00s","10s"])
Out[271]:
1866    NaN
1895    NaN
1894    NaN
1893    NaN
1892    NaN
       ... 
622     NaN
621     NaN
620     NaN
626     NaN
581     NaN
Name: pubmedid, Length: 3610, dtype: category
Categories (4, object): ['80s' < '90s' < '00s' < '10s']
In [272]:
pd.cut(x = data["pubmedid"],bins=[21359240.2,22514877.4, 23670514.6, 24826151.8, 25981789.0, ],labels=["80s", "90s","00s","10s"]).value_counts()
Out[272]:
pubmedid
90s    1397
10s    1135
00s     423
80s       0
Name: count, dtype: int64
In [273]:
pd.cut(x = data["pubmedid"],bins=[21359240.2,22514877.4, 23670514.6, 24826151.8, 25981789.0, ],labels=["80s", "90s","00s","10s"], include_lowest=True)
Out[273]:
1866    NaN
1895    NaN
1894    NaN
1893    NaN
1892    NaN
       ... 
622     NaN
621     NaN
620     NaN
626     NaN
581     NaN
Name: pubmedid, Length: 3610, dtype: category
Categories (4, object): ['80s' < '90s' < '00s' < '10s']
In [274]:
data
Out[274]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
1866 metahit -1.0 -1.0 stool n NaN NaN denmark Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1895 metahit -1.0 -1.0 stool ibd_crohn_disease NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1894 metahit -1.0 -1.0 stool n NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1893 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1892 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
622 doyle_bt2 -1.0 12311.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
621 doyle_bt2 -1.0 12271.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
620 doyle_bt2 -1.0 12221.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
626 doyle_bt2 -1.0 12351.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
581 doyle_bt2 -1.0 10151.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3513 columns

In [275]:
# qcut

pd.qcut(x=data["pubmedid"], q=4)
Out[275]:
1866    (20203602.999, 22699609.0]
1895    (20203602.999, 22699609.0]
1894    (20203602.999, 22699609.0]
1893    (20203602.999, 22699609.0]
1892    (20203602.999, 22699609.0]
                   ...            
622                            NaN
621                            NaN
620                            NaN
626                            NaN
581                            NaN
Name: pubmedid, Length: 3610, dtype: category
Categories (4, interval[float64, right]): [(20203602.999, 22699609.0] < (22699609.0, 23719380.0] < (23719380.0, 24997787.0] < (24997787.0, 25981789.0]]
In [276]:
pd.qcut(x=data["pubmedid"], q=4).value_counts()
Out[276]:
pubmedid
(20203602.999, 22699609.0]    1091
(24997787.0, 25981789.0]       753
(23719380.0, 24997787.0]       660
(22699609.0, 23719380.0]       561
Name: count, dtype: int64
In [278]:
pd.qcut(x=data["pubmedid"], q=4,precision=50).value_counts()
Out[278]:
pubmedid
(20203603.0, 22699609.0]    1091
(24997787.0, 25981789.0]     753
(23719380.0, 24997787.0]     660
(22699609.0, 23719380.0]     561
Name: count, dtype: int64
In [280]:
pd.qcut(x=data["pubmedid"], q=[0,0.5,0.75,0.95,1],precision=50).value_counts()
Out[280]:
pubmedid
(20203603.0, 23719380.0]    1652
(23719380.0, 24997787.0]     660
(24997787.0, 25432777.0]     657
(25432777.0, 25981789.0]      96
Name: count, dtype: int64
In [282]:
pd.qcut(x=data["pubmedid"], q=[0, 0.5, 0.75, 0.95, 1], labels=["Low tier", "Above Avg", "Popular Games", "Mega Hits"], precision=50).value_counts()
Out[282]:
pubmedid
Low tier         1652
Above Avg         660
Popular Games     657
Mega Hits          96
Name: count, dtype: int64
In [283]:
data["Popularity"] = pd.qcut(x=data["pubmedid"], q=[0, 0.5, 0.75, 0.95, 1], labels=["Low tier", "Above Avg", "Popular Games", "Mega Hits"], precision=50).value_counts()
In [284]:
data
Out[284]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965 Popularity
1866 metahit -1.0 -1.0 stool n NaN NaN denmark Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN
1895 metahit -1.0 -1.0 stool ibd_crohn_disease NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN
1894 metahit -1.0 -1.0 stool n NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN
1893 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN
1892 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
622 doyle_bt2 -1.0 12311.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN
621 doyle_bt2 -1.0 12271.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN
620 doyle_bt2 -1.0 12221.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN
626 doyle_bt2 -1.0 12351.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN
581 doyle_bt2 -1.0 10151.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN

3610 rows × 3514 columns

In [285]:
# apply 

country = ["spain","usa","denmark","france"]
In [286]:
def categories(x):
    if x in country:
        return "country"
In [296]:
data["pubmedid"]
Out[296]:
1866    20203603.0
1895    20203603.0
1894    20203603.0
1893    20203603.0
1892    20203603.0
           ...    
622            NaN
621            NaN
620            NaN
626            NaN
581            NaN
Name: pubmedid, Length: 3610, dtype: float64
In [297]:
data["pubmedid"].apply(categories)
Out[297]:
1866    None
1895    None
1894    None
1893    None
1892    None
        ... 
622     None
621     None
620     None
626     None
581     None
Name: pubmedid, Length: 3610, dtype: object
In [298]:
data["pubmedid_data"] = data["pubmedid"].apply(categories)
In [299]:
data
Out[299]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965 Popularity pubmedid_data
1866 metahit -1.0 -1.0 stool n NaN NaN denmark Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN None
1895 metahit -1.0 -1.0 stool ibd_crohn_disease NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN None
1894 metahit -1.0 -1.0 stool n NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN None
1893 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN None
1892 metahit -1.0 -1.0 stool ibd_ulcerative_colitis NaN NaN spain Illumina 20203603.0 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN None
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
622 doyle_bt2 -1.0 12311.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN None
621 doyle_bt2 -1.0 12271.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN None
620 doyle_bt2 -1.0 12221.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN None
626 doyle_bt2 -1.0 12351.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN None
581 doyle_bt2 -1.0 10151.0 nd nd NaN NaN usa Illumina NaN ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 NaN None

3610 rows × 3515 columns

In [300]:
import scipy.stats as stats
In [301]:
z_score = data.select_dtypes("float").apply(lambda x: stats.zscore(x))
In [302]:
z_score
Out[302]:
sampleID subjectID age gender pubmedid k__Archaea k__Archaea|p__Euryarchaeota k__Archaea|p__Euryarchaeota|c__Methanobacteria k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965 Popularity
1866 -0.016646 -0.482639 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
1895 -0.016646 -0.482639 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
1894 -0.016646 -0.482639 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
1893 -0.016646 -0.482639 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
1892 -0.016646 -0.482639 NaN NaN NaN -0.061271 -0.061271 -0.061186 -0.061186 -0.061186 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
622 -0.016646 -0.482590 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
621 -0.016646 -0.482590 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
620 -0.016646 -0.482590 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
626 -0.016646 -0.482590 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
581 -0.016646 -0.482598 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN

3610 rows × 3308 columns

In [303]:
z_score.mean()
Out[303]:
sampleID                                                                                                                                            3.168903e-16
subjectID                                                                                                                                          -1.259688e-16
age                                                                                                                                                          NaN
gender                                                                                                                                                       NaN
pubmedid                                                                                                                                                     NaN
                                                                                                                                                        ...     
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085        -6.888918e-18
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855    9.841312e-19
k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1                         -5.904787e-18
k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965        -5.904787e-18
Popularity                                                                                                                                                   NaN
Length: 3308, dtype: float64
In [304]:
z_score.std()
Out[304]:
sampleID                                                                                                                                            1.000139
subjectID                                                                                                                                           1.000139
age                                                                                                                                                      NaN
gender                                                                                                                                                   NaN
pubmedid                                                                                                                                                 NaN
                                                                                                                                                      ...   
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085         1.000139
k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855    1.000139
k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1                          1.000139
k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965         1.000139
Popularity                                                                                                                                               NaN
Length: 3308, dtype: float64
In [305]:
z_score
Out[305]:
sampleID subjectID age gender pubmedid k__Archaea k__Archaea|p__Euryarchaeota k__Archaea|p__Euryarchaeota|c__Methanobacteria k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales k__Archaea|p__Euryarchaeota|c__Methanobacteria|o__Methanobacteriales|f__Methanobacteriaceae ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965 Popularity
1866 -0.016646 -0.482639 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
1895 -0.016646 -0.482639 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
1894 -0.016646 -0.482639 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
1893 -0.016646 -0.482639 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
1892 -0.016646 -0.482639 NaN NaN NaN -0.061271 -0.061271 -0.061186 -0.061186 -0.061186 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
622 -0.016646 -0.482590 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
621 -0.016646 -0.482590 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
620 -0.016646 -0.482590 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
626 -0.016646 -0.482590 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN
581 -0.016646 -0.482598 NaN NaN NaN -0.179261 -0.179261 -0.179194 -0.179194 -0.179194 ... -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 -0.016646 NaN

3610 rows × 3308 columns

In [2]:
import pandas as pd
import numpy as np
import matplotlib.pyplot as plt
import seaborn as sns
In [3]:
data = pd.read_csv("abundance.csv")

/var/folders/b4/_dfkx7ls7yx63xxh8hx0s11r0000gn/T/ipykernel_43800/2423369456.py:1: DtypeWarning: Columns (2,5,9,20,26,42,47,51,52,59,61,68,76,77,78,79) have mixed types. Specify dtype option on import or set low_memory=False.
  data = pd.read_csv("abundance.csv")
In [4]:
data
Out[4]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology pubmedid ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 Candela_Africa H10 h10 stool n 40 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 Candela_Africa H11 h11 stool n 29 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 Candela_Africa H12 h12 stool n 8 female tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 Candela_Africa H13 h13 stool n 34 male tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 Candela_Africa H14 h14 stool n 30 male tanzania Illumina 25981789 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3605 Zeller_fecal_colorectal_cancer CCIS95409808ST-4-0 fr-152 stool n 63 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3606 Zeller_fecal_colorectal_cancer CCIS96387239ST-4-0 fr-626 stool small_adenoma 66 male france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3607 Zeller_fecal_colorectal_cancer CCIS98482370ST-3-0 fr-052 stool n 53 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 Zeller_fecal_colorectal_cancer CCIS98512455ST-4-0 fr-459 stool cancer 63 male france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 Zeller_fecal_colorectal_cancer CCIS98832363ST-4-0 fr-552 stool cancer 55 female france Illumina 25432777 ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3513 columns

In [5]:
# corr()

corr_matrix = data.drop("pubmedid", axis=1)
In [6]:
corr_matrix
Out[6]:
dataset_name sampleID subjectID bodysite disease age gender country sequencing_technology camp ... k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Enterococcaceae|g__Enterococcus|s__Enterococcus_gilvus|t__Enterococcus_gilvus_unclassified k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis k__Bacteria|p__Firmicutes|c__Bacilli|o__Lactobacillales|f__Lactobacillaceae|g__Lactobacillus|s__Lactobacillus_otakiensis|t__GCF_000415925 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Peptococcaceae|g__Desulfotomaculum|s__Desulfotomaculum_ruminis|t__GCF_000215085 k__Bacteria|p__Firmicutes|c__Clostridia|o__Clostridiales|f__Ruminococcaceae|g__Faecalibacterium|s__Faecalibacterium_prausnitzii|t__GCF_000209855 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1 k__Bacteria|p__Firmicutes|c__Negativicutes|o__Selenomonadales|f__Veillonellaceae|g__Megasphaera|s__Megasphaera_sp_BV3C16_1|t__GCF_000478965
0 Candela_Africa H10 h10 stool n 40 female tanzania Illumina dedauko ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1 Candela_Africa H11 h11 stool n 29 female tanzania Illumina dedauko ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
2 Candela_Africa H12 h12 stool n 8 female tanzania Illumina dedauko ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3 Candela_Africa H13 h13 stool n 34 male tanzania Illumina dedauko ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4 Candela_Africa H14 h14 stool n 30 male tanzania Illumina dedauko ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
3605 Zeller_fecal_colorectal_cancer CCIS95409808ST-4-0 fr-152 stool n 63 female france Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3606 Zeller_fecal_colorectal_cancer CCIS96387239ST-4-0 fr-626 stool small_adenoma 66 male france Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3607 Zeller_fecal_colorectal_cancer CCIS98482370ST-3-0 fr-052 stool n 53 female france Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3608 Zeller_fecal_colorectal_cancer CCIS98512455ST-4-0 fr-459 stool cancer 63 male france Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3609 Zeller_fecal_colorectal_cancer CCIS98832363ST-4-0 fr-552 stool cancer 55 female france Illumina nd ... 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

3610 rows × 3512 columns

In [7]:
numeric_data = data.select_dtypes(include=['float64', 'int64'])
In [ ]:
In [ ]:
In [309]:
corr_matrix_numeric = corr_matrix.apply(pd.to_numeric, errors='coerce')
In [310]:
corr_matrix_numeric = corr_matrix_numeric.dropna(axis=0, how='any').dropna(axis=1, how='any')
In [312]:
corr_matrix_numeric = corr_matrix_numeric.fillna(0)
In [313]:
if not corr_matrix_numeric.empty:
    sns.heatmap(corr_matrix_numeric)
else:
    print("Correlation matrix is empty.")

Correlation matrix is empty.

GroupBy , most important thing¶

In [314]:
data.groupby("country")["pubmedid"].mean()
Out[314]:
country
 -            2.302312e+07
china         2.385132e+07
denmark       2.378328e+07
estonia       2.371938e+07
finland       2.371938e+07
france        2.542009e+07
germany       2.358196e+07
hungary       2.371938e+07
iceland       2.371938e+07
italy         2.598179e+07
nd            2.269961e+07
norway        2.371938e+07
peru          2.580711e+07
slovakia      2.371938e+07
spain         2.427308e+07
sweden        2.371938e+07
tanzania      2.598179e+07
usa           2.346169e+07
yugoslavia    2.371938e+07
Name: pubmedid, dtype: float64
In [315]:
data.country.unique()
Out[315]:
array(['denmark', 'spain', 'usa', 'nd', 'china', ' -', 'germany',
       'sweden', 'france', 'yugoslavia', 'norway', 'hungary', 'estonia',
       'finland', 'iceland', 'slovakia', 'peru', 'italy', 'tanzania'],
      dtype=object)
In [316]:
print(data["pubmedid"].mean())

data.loc[data["country"] == "denmark", "pubmedid"]

23758861.45774878
Out[316]:
1866    20203603.0
1878    20203603.0
1877    20203603.0
1876    20203603.0
1875    20203603.0
           ...    
2045    24997787.0
2042    24997787.0
2050    24997787.0
2043    24997787.0
2044    24997787.0
Name: pubmedid, Length: 514, dtype: float64
In [317]:
print(data["pubmedid"].mean())

data.loc[data["country"] == "denmark", "pubmedid"].mean()

23758861.45774878
Out[317]:
23783279.59922179
In [ ]: